Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_D12
         (875 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.               25   1.2  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          22   6.5  
DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization prot...    22   8.5  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   8.5  

>DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.
          Length = 132

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 17/57 (29%), Positives = 28/57 (49%)
 Frame = +1

Query: 130 YFNSYLTNLKHKTLTKMLYLEDYLEMIEHLPQELRDRFTEMREMDLSVQNNMDTLEK 300
           Y   ++T  KH  L K   + D  + + HLP+ ++D   ++     S+QN  D  EK
Sbjct: 58  YLKCFMT--KHGILDKNAEV-DVQKALRHLPRSMQDSTKKLFNKCKSIQNE-DPCEK 110


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 13/47 (27%), Positives = 19/47 (40%)
 Frame = +1

Query: 220 PQELRDRFTEMREMDLSVQNNMDTLEKRVRTLFGGCRRGEINTDQAN 360
           P +L      +R    SVQ           TL+G C+R  I   ++N
Sbjct: 522 PADLDRALEAIRSGQTSVQRASTEFGIPTGTLYGRCKREGIELSRSN 568


>DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization protein
           protein.
          Length = 250

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = +1

Query: 388 YAKTLEEADEKTTLANQMYDLVDRYLRR 471
           + K+LEE + K  +  +      R+LRR
Sbjct: 96  FIKSLEERERKHAVHKEQLSREQRFLRR 123


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 20/104 (19%), Positives = 42/104 (40%), Gaps = 1/104 (0%)
 Frame = +1

Query: 160 HKTLTKMLYLEDYLEMIEHLPQELRDRFTEMREMDLSVQNNMDTLEKRVRTLFGGCRRGE 339
           H TL K + L + +  +        +   ++   +L   +    +++   T+F      +
Sbjct: 445 HATLEKFMILCNLMRTMNRKQISELESNMQISPNELKPNDKSQVIKQNTWTVFRDAIT-Q 503

Query: 340 INTDQANTEFSD-IKRGYAKTLEEADEKTTLANQMYDLVDRYLR 468
             T  A     + I+RG  K++E A+  + L   +    D Y+R
Sbjct: 504 TGTGPAFLTIKEWIERGTTKSMEAANIMSKLPKTVRTPTDSYIR 547


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,416
Number of Sequences: 438
Number of extensions: 3723
Number of successful extensions: 13
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28402218
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)