Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_D10
         (968 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_04_0241 - 19332540-19332635,19332931-19333023,19333743-193337...    31   1.8  
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943...    30   3.2  
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330...    29   4.2  
05_07_0219 - 28474661-28475146,28475979-28476644                       29   4.2  
02_05_0686 - 30900748-30902167,30903442-30904742                       29   5.6  
03_06_0627 - 35172246-35172349,35172903-35173005,35173107-351731...    28   9.7  

>05_04_0241 -
           19332540-19332635,19332931-19333023,19333743-19333790,
           19333907-19333999
          Length = 109

 Score = 30.7 bits (66), Expect = 1.8
 Identities = 14/48 (29%), Positives = 22/48 (45%)
 Frame = +1

Query: 112 MSVWSTLNRTVFKRTSTFALAVAGGTFFFERTFELVSQSIFENLNKGK 255
           M +W  L R V +R + +   V  G F  ER  +     ++E  N G+
Sbjct: 1   MGLWDALYRVVMRRNAVYVTFVVAGAFAGERAVDYGVHKVWEMNNIGE 48


>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
            9435445-9435526,9435610-9435660,9435749-9435829,
            9435965-9436006,9436117-9436215,9438130-9438201,
            9438557-9438680,9438850-9439723,9440274-9440456,
            9440941-9442741,9442825-9443049,9443117-9443814,
            9444519-9444591
          Length = 1541

 Score = 29.9 bits (64), Expect = 3.2
 Identities = 20/64 (31%), Positives = 20/64 (31%), Gaps = 1/64 (1%)
 Frame = +1

Query: 706  PPXPXGGXGGFGXXGXPXPXSPXXXXXXXPPGXFXXXGXXXXXXPPXG-GXXRVSPXXXG 882
            PP P GG GG      P P  P       PP      G      PP G       P   G
Sbjct: 1123 PPPPIGGLGGH--QAPPAPPLPEGIGGVPPPPPVGGLGGPPAPPPPAGFRGGTPPPNAHG 1180

Query: 883  GXPP 894
            G  P
Sbjct: 1181 GVAP 1184



 Score = 29.9 bits (64), Expect = 3.2
 Identities = 20/70 (28%), Positives = 22/70 (31%), Gaps = 7/70 (10%)
 Frame = +1

Query: 706  PPXPXGGXGG-------FGXXGXPXPXSPXXXXXXXPPGXFXXXGXXXXXXPPXGGXXRV 864
            PP P GG GG        G  G   P +        PP      G      PP      +
Sbjct: 1150 PPPPVGGLGGPPAPPPPAGFRGGTPPPNAHGGVAPPPPPPRGHGGVGGPPTPPGAPAPPM 1209

Query: 865  SPXXXGGXPP 894
             P   GG PP
Sbjct: 1210 PPGVPGGPPP 1219



 Score = 28.7 bits (61), Expect = 7.4
 Identities = 19/59 (32%), Positives = 19/59 (32%)
 Frame = -3

Query: 882  PXXXGGNPXXPPXGGXXXXXXPPXPKXXXGXXXXXXXGGXXXRGPXXXKTXLSPRGGGG 706
            P   GG P  PP GG      PP P    G        G     P        PRG GG
Sbjct: 1142 PEGIGGVPPPPPVGGLGGPPAPPPPAGFRGGTPPPNAHGGVAPPPP------PPRGHGG 1194


>08_01_0375 -
           3307206-3307316,3307870-3307965,3308061-3308132,
           3308247-3308315,3308427-3308513,3308753-3308858,
           3309118-3309237,3309327-3309406,3309497-3309878,
           3310746-3310814,3311460-3312202
          Length = 644

 Score = 29.5 bits (63), Expect = 4.2
 Identities = 16/58 (27%), Positives = 17/58 (29%)
 Frame = -1

Query: 893 GGXPPXFXGETRXXPPXGGXXKXXXPXXXXXPGGXXXXXXXGEXGXGXPXXPKPPXPP 720
           G  PP         PP G       P     PG           G G P   +PP PP
Sbjct: 29  GPPPPQQPAYGHMPPPQGAPPPFLAPPPPPPPGPPPPHQPQFNFGPGPPQQQQPPPPP 86


>05_07_0219 - 28474661-28475146,28475979-28476644
          Length = 383

 Score = 29.5 bits (63), Expect = 4.2
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = -3

Query: 198 KEERSSGNSQSKRRCTFENSTI*CRPHGHFENF 100
           K + +SGN + K R  F  S I CR  G F +F
Sbjct: 322 KSDEASGNGEKKFRGKFNKSKIECRRCGKFGHF 354


>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 29.1 bits (62), Expect = 5.6
 Identities = 15/36 (41%), Positives = 15/36 (41%), Gaps = 1/36 (2%)
 Frame = -1

Query: 749 PXXPK-PPXPPXGXGGXXFXAXKNPSXPXPPXXXXK 645
           P  PK PP PP   G       K PS P PP    K
Sbjct: 338 PPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGK 373


>03_06_0627 -
           35172246-35172349,35172903-35173005,35173107-35173190,
           35173504-35173599,35173686-35173736,35173805-35173945,
           35174098-35174154,35175089-35175163,35176255-35176527,
           35176608-35176667,35176754-35176846,35177196-35177348
          Length = 429

 Score = 28.3 bits (60), Expect = 9.7
 Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 5/33 (15%)
 Frame = +3

Query: 108 QNVRVVYIKSYCFQ-----TYIYVCFGCCRRNV 191
           Q V ++Y+K Y +Q      YI+ C G C R++
Sbjct: 180 QRVPLIYVKLYTYQICRALAYIHNCVGICHRDI 212


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,812,814
Number of Sequences: 37544
Number of extensions: 295090
Number of successful extensions: 757
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 583
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 719
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2811537600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)