Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP10_F_D09
(884 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ... 95 2e-18
UniRef50_UPI00015C640B Cluster: hypothetical protein CKO_pCKO2p0... 85 2e-15
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi... 73 1e-11
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 68 3e-10
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ... 62 1e-08
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 58 3e-07
UniRef50_UPI00015C63F8 Cluster: hypothetical protein CKO_pCKO3p0... 51 5e-05
UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4... 50 1e-04
UniRef50_P03087 Cluster: Capsid protein VP1; n=1927; Polyomaviru... 45 0.002
UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1; ... 44 0.005
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 44 0.005
UniRef50_P03846 Cluster: Putative uncharacterized protein 1; n=2... 43 0.012
UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 40 0.084
UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1; ... 36 1.4
UniRef50_Q9YA06 Cluster: Putative uncharacterized protein; n=1; ... 36 1.8
UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep: Alpha-h... 34 4.2
UniRef50_A3S1G4 Cluster: Putative uncharacterized protein; n=1; ... 34 5.5
UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1; ... 34 5.5
>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
root|Rep: Putative uncharacterized protein - Salmonella
typhimurium
Length = 127
Score = 95.5 bits (227), Expect = 2e-18
Identities = 44/50 (88%), Positives = 44/50 (88%)
Frame = +2
Query: 566 PXTSITKIDAQVRGGETRQDYKDTRRXPLEAPSCALLFRPCRLRDTXXAF 715
P TSITKIDAQVRGGETRQDYKDTRR PLEAPSCALLFRPCRL DT F
Sbjct: 22 PLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRPCRLPDTCPPF 71
Score = 45.2 bits (102), Expect = 0.002
Identities = 36/108 (33%), Positives = 42/108 (38%)
Frame = +3
Query: 504 SKRPGTVKRPRCWRFSIGSAPPXRASQKSTLKSEVAKPDRTIKIPGVXPWKLPRALSCSD 683
SK+ T R RFSIGSAP + K + + + K P + P
Sbjct: 2 SKKQSTGTSQRRCRFSIGSAP-LTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFR 60
Query: 684 PAAYGIPXPPFSLRGXVXLXIAHAVGISXRX*VVPPXLGCVXXPPVQP 827
P PPFSLR IAHAVGIS R P PP P
Sbjct: 61 PCRLPDTCPPFSLREAWRFLIAHAVGISVRCRSFAPSWAVCTNPPFSP 108
>UniRef50_UPI00015C640B Cluster: hypothetical protein
CKO_pCKO2p07168; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO2p07168 -
Citrobacter koseri ATCC BAA-895
Length = 99
Score = 85.0 bits (201), Expect = 2e-15
Identities = 45/86 (52%), Positives = 50/86 (58%)
Frame = -3
Query: 855 DSYRIRXXGRAERGVXXHSPXWGERPTXEXRYLQRELXEAPRXPEGRKAXQVSRKRQGRN 676
DSYR RAERGV +SP W ERP +APR P+G+KA QVS KRQGRN
Sbjct: 14 DSYRKGRSSRAERGVRAYSPAWSERPKPSRDTSSVSYEKAPRFPKGKKAEQVSGKRQGRN 73
Query: 675 RRAHEGASRGXRLVSL*SCRVSPPLT 598
RRAHEGA+ SL PPLT
Sbjct: 74 RRAHEGAAGEKSPASLSPVGFRPPLT 99
>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
organisms|Rep: Predicted protein - Nematostella
vectensis
Length = 97
Score = 72.9 bits (171), Expect = 1e-11
Identities = 33/40 (82%), Positives = 34/40 (85%)
Frame = +2
Query: 566 PXTSITKIDAQVRGGETRQDYKDTRRXPLEAPSCALLFRP 685
P TSITK DAQ+ GGETRQDYKDTRR PL APSCALLF P
Sbjct: 58 PLTSITKSDAQISGGETRQDYKDTRRFPLAAPSCALLFLP 97
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 68.1 bits (159), Expect = 3e-10
Identities = 31/40 (77%), Positives = 32/40 (80%)
Frame = +2
Query: 566 PXTSITKIDAQVRGGETRQDYKDTRRXPLEAPSCALLFRP 685
P TSI K DAQ+ GGETRQDYKD RR PL APSCALLF P
Sbjct: 90 PLTSIAKSDAQISGGETRQDYKDPRRFPLVAPSCALLFLP 129
Score = 57.2 bits (132), Expect = 5e-07
Identities = 39/77 (50%), Positives = 43/77 (55%)
Frame = +3
Query: 336 RGEAVCVLGALPLPRSLTRCARSFGCGERYQLTXRR*YGYPQNQGITQERTCEQKASKRP 515
R +C G +PLPRSLTR ARSFGCGERY+LT G E T + SK
Sbjct: 26 RVSRICDTGDIPLPRSLTRYARSFGCGERYRLT--------DGDGNFLEDT-RKTLSKEE 76
Query: 516 GTVKRPRCWRFSIGSAP 566
RPR RFSIGSAP
Sbjct: 77 ---IRPRRSRFSIGSAP 90
>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
root|Rep: Putative uncharacterized protein - Escherichia
coli
Length = 61
Score = 62.5 bits (145), Expect = 1e-08
Identities = 29/38 (76%), Positives = 29/38 (76%)
Frame = -1
Query: 512 PFAGLLLTCSFLRYPLILWITVLPPXSELIPLAAAERP 399
P LLTCSF YPLILWITVLPP SEL PLAA ERP
Sbjct: 19 PVLCFLLTCSFRLYPLILWITVLPPLSELTPLAAVERP 56
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 58.0 bits (134), Expect = 3e-07
Identities = 32/57 (56%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Frame = +3
Query: 312 CINESANARGEAVCVLGALPLPRSLTRCARSFGCGERYQL-TXRR*YGYPQNQGITQ 479
CI + A AR EAV VL ALPL RS TRC RS GCG + R YG PQ QG+ Q
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQGMAQ 322
>UniRef50_UPI00015C63F8 Cluster: hypothetical protein
CKO_pCKO3p06146; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO3p06146 -
Citrobacter koseri ATCC BAA-895
Length = 125
Score = 50.8 bits (116), Expect = 5e-05
Identities = 30/67 (44%), Positives = 33/67 (49%)
Frame = +3
Query: 627 IKIPGVXPWKLPRALSCSDPAAYGIPXPPFSLRGXVXLXIAHAVGISXRX*VVPPXLGCV 806
+KI V LP ALSCS+PA IP PPFSL G V L + GIS R P
Sbjct: 32 LKIITVSDESLPLALSCSNPAVSRIPVPPFSLAGSVALSHSSHSGISARCRSFAPSWAVS 91
Query: 807 XXPPVQP 827
PP P
Sbjct: 92 KNPPFSP 98
>UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4;
Bacteria|Rep: Putative uncharacterized protein 1 -
Escherichia coli
Length = 42
Score = 49.6 bits (113), Expect = 1e-04
Identities = 21/27 (77%), Positives = 21/27 (77%)
Frame = -3
Query: 855 DSYRIRXXGRAERGVXXHSPXWGERPT 775
DSYRIR GRAERGV HSP W ERPT
Sbjct: 14 DSYRIRRSGRAERGVRAHSPAWSERPT 40
>UniRef50_P03087 Cluster: Capsid protein VP1; n=1927;
Polyomavirus|Rep: Capsid protein VP1 - Simian virus 40
(SV40)
Length = 364
Score = 45.2 bits (102), Expect = 0.002
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = +3
Query: 114 DPDMIRYIDEFGQTTTRMQ 170
DPDMIRYIDEFGQTTTRMQ
Sbjct: 346 DPDMIRYIDEFGQTTTRMQ 364
>UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1;
Beggiatoa sp. SS|Rep: Putative uncharacterized protein -
Beggiatoa sp. SS
Length = 114
Score = 44.0 bits (99), Expect = 0.005
Identities = 20/41 (48%), Positives = 28/41 (68%)
Frame = +2
Query: 563 PPXTSITKIDAQVRGGETRQDYKDTRRXPLEAPSCALLFRP 685
PP T+ITKI Q + +T+ +YK T PL++PS +LLF P
Sbjct: 74 PPLTTITKIYPQFKNTQTQHNYKYTTPFPLQSPSYSLLFPP 114
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 44.0 bits (99), Expect = 0.005
Identities = 23/41 (56%), Positives = 27/41 (65%)
Frame = +1
Query: 238 INKLTTTIAFILCFRFRVEVWEVFSALMNRPTRGERRFAYW 360
+++LT L RF V V +ALMNRPTRGERRFAYW
Sbjct: 1 MSELTHINCVALTARFPVGKPVVPAALMNRPTRGERRFAYW 41
>UniRef50_P03846 Cluster: Putative uncharacterized protein 1; n=2;
cellular organisms|Rep: Putative uncharacterized protein
1 - Escherichia coli
Length = 47
Score = 42.7 bits (96), Expect = 0.012
Identities = 18/27 (66%), Positives = 20/27 (74%)
Frame = -3
Query: 855 DSYRIRXXGRAERGVXXHSPXWGERPT 775
+SYRIR RAERGV +SP W ERPT
Sbjct: 14 NSYRIRRSSRAERGVLAYSPAWSERPT 40
>UniRef50_P03023 Cluster: Lactose operon repressor; n=24;
Enterobacteriaceae|Rep: Lactose operon repressor -
Escherichia coli (strain K12)
Length = 360
Score = 39.9 bits (89), Expect = 0.084
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -2
Query: 382 ERGSGRAPNTQTASPRALADSLMQ 311
+R + APNTQTASPRALADSLMQ
Sbjct: 325 KRKTTLAPNTQTASPRALADSLMQ 348
>UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 37
Score = 35.9 bits (79), Expect = 1.4
Identities = 16/21 (76%), Positives = 16/21 (76%)
Frame = +2
Query: 710 AFLPSGXRGASHSSRCRYLXS 772
AFLPSG SHSSRCRYL S
Sbjct: 16 AFLPSGSVALSHSSRCRYLSS 36
Score = 35.1 bits (77), Expect = 2.4
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = +1
Query: 664 VRSPVPTLPLTGYLXRLSPFG 726
+RSPVPTLPLTGYL P G
Sbjct: 1 MRSPVPTLPLTGYLSAFLPSG 21
>UniRef50_Q9YA06 Cluster: Putative uncharacterized protein; n=1;
Aeropyrum pernix|Rep: Putative uncharacterized protein -
Aeropyrum pernix
Length = 731
Score = 35.5 bits (78), Expect = 1.8
Identities = 18/54 (33%), Positives = 28/54 (51%)
Frame = -3
Query: 615 VSPPLT*ASIFVMLVQGGRSLWKNASNAAFLRFLAFCWPFAHMFFPALSPDSVD 454
++PP+ A+ FV V G W+ A NA F + PF ++ PA+ +VD
Sbjct: 599 ITPPVALAA-FVGAVLAGADFWRTAINATIYGFAKYILPFVFVYSPAILIVTVD 651
>UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep:
Alpha-hemolysin - Aeromonas hydrophila
Length = 59
Score = 34.3 bits (75), Expect = 4.2
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +2
Query: 446 IRLSTESGDNAGKNM 490
IRLSTESGDNAGKNM
Sbjct: 45 IRLSTESGDNAGKNM 59
>UniRef50_A3S1G4 Cluster: Putative uncharacterized protein; n=1;
Prochlorococcus marinus str. MIT 9211|Rep: Putative
uncharacterized protein - Prochlorococcus marinus str.
MIT 9211
Length = 101
Score = 33.9 bits (74), Expect = 5.5
Identities = 16/56 (28%), Positives = 31/56 (55%)
Frame = +3
Query: 495 QKASKRPGTVKRPRCWRFSIGSAPPXRASQKSTLKSEVAKPDRTIKIPGVXPWKLP 662
+K S+ ++P ++ S +AS ST+++ +K D ++IPGV +K+P
Sbjct: 5 KKVSEGEAKSQKPDSLDRNVKSKKSAKASSNSTVEANASKEDVLLRIPGVLEYKVP 60
>UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1;
Methanocorpusculum labreanum Z|Rep: Putative
uncharacterized protein - Methanocorpusculum labreanum
(strain ATCC 43576 / DSM 4855 / Z)
Length = 109
Score = 33.9 bits (74), Expect = 5.5
Identities = 21/55 (38%), Positives = 28/55 (50%)
Frame = -1
Query: 272 KMNAIVVVNLFIAAYNGYK*SNSITNFTNKAFFSLHSSCGLSKLINVSYHVWIQL 108
+MNA V + FIAA + +T + AFF L S G ++VSY VW L
Sbjct: 27 RMNAWVDLAAFIAAV-----ATCVTGYVLWAFFPLGSGRGAMNFLDVSYQVWYDL 76
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 764,135,242
Number of Sequences: 1657284
Number of extensions: 14697086
Number of successful extensions: 36263
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 34711
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36235
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 79522270534
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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