Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_D09
         (884 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0802 + 6246267-6247541,6247625-6247682,6247806-6248129,624...    33   0.40 
06_03_0223 - 18391177-18391287,18391570-18392081,18392200-183930...    30   2.1  
02_05_0868 + 32342967-32343915,32344389-32344447                       29   3.8  
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095...    28   8.7  

>01_01_0802 +
           6246267-6247541,6247625-6247682,6247806-6248129,
           6248321-6248355
          Length = 563

 Score = 32.7 bits (71), Expect = 0.40
 Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
 Frame = +3

Query: 546 FSIGSAPPXRASQKSTLKSEVAKPDRTIKIPGVXPWKLP-RALSCSDPAAYGIPXPPFS 719
           FS+ S+P  R   +  L +E+A+   T K     P   P  ALS +DP+    P PP S
Sbjct: 57  FSLSSSPAARRELRRRLTAELAQVRATCKRLSSLPAPAPSSALSATDPSTPLPPHPPVS 115


>06_03_0223 -
           18391177-18391287,18391570-18392081,18392200-18393019,
           18393603-18393671,18393973-18394062,18395381-18395575
          Length = 598

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 15/26 (57%), Positives = 16/26 (61%)
 Frame = +3

Query: 651 WKLPRALSCSDPAAYGIPXPPFSLRG 728
           W   RA SCSDPAA G+  PP S  G
Sbjct: 2   WLATRASSCSDPAAAGL-VPPKSAAG 26


>02_05_0868 + 32342967-32343915,32344389-32344447
          Length = 335

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 19/61 (31%), Positives = 24/61 (39%)
 Frame = +3

Query: 531 PRCWRFSIGSAPPXRASQKSTLKSEVAKPDRTIKIPGVXPWKLPRALSCSDPAAYGIPXP 710
           PR W    G APP  A  ++  +   A P R  + PG  P   P       P    +P P
Sbjct: 78  PRRWLIYGGEAPPVAAPGRAFRQPAPAVPGRAFRQPGPAPAPSP----APAPPRRRMPSP 133

Query: 711 P 713
           P
Sbjct: 134 P 134


>10_08_0940 -
           21708557-21708733,21709058-21709142,21709330-21709551,
           21710640-21710815,21711883-21711946,21712433-21712507,
           21715114-21715199,21715297-21716715
          Length = 767

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = +3

Query: 318 NESAN---ARGEAVCVLGALPLPRSLTRCAR 401
           +ESAN   AR EAV  +G +P+   L RC+R
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,891,311
Number of Sequences: 37544
Number of extensions: 462049
Number of successful extensions: 1173
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1137
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1171
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2503236492
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)