Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_D07
         (866 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_01_0480 - 3676529-3676687,3676767-3676931,3677044-3677220,367...    29   4.8  
08_02_0724 + 20439312-20439523,20441282-20441345                       28   8.4  

>03_01_0480 -
           3676529-3676687,3676767-3676931,3677044-3677220,
           3678170-3678273,3678700-3678843,3679831-3679898,
           3680059-3680162,3680759-3680767,3681572-3681657,
           3681918-3683373
          Length = 823

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = +1

Query: 574 VKHYACLLKQIWVKGVLXQAMSYIMFFKC 660
           +KHY C++  +   G+L +A  +I   KC
Sbjct: 384 IKHYGCMVDMLGRAGLLKEAFEFIDTMKC 412


>08_02_0724 + 20439312-20439523,20441282-20441345
          Length = 91

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 17/48 (35%), Positives = 24/48 (50%)
 Frame = +2

Query: 344 YGAATATIQSNRTIMALPTTLGATASFTAW*HQGATASRSSARTKTMD 487
           Y   +A  +SN T + LPT    ++S T W  +   ASR +A  K  D
Sbjct: 14  YSTTSAVRRSNPTEVHLPTRSKPSSSSTTWSIEIIQASRYAAYQKMSD 61


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,806,399
Number of Sequences: 37544
Number of extensions: 414481
Number of successful extensions: 1205
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1173
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1205
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2432722788
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)