Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP10_F_D06
(927 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P48166 Cluster: 60S ribosomal protein L44; n=79; Eukary... 102 1e-20
UniRef50_Q969Q0 Cluster: 60S ribosomal protein L36a-like; n=88; ... 101 3e-20
UniRef50_P83881 Cluster: 60S ribosomal protein L36a; n=44; Fungi... 99 8e-20
UniRef50_A7P2V5 Cluster: Chromosome chr1 scaffold_5, whole genom... 90 9e-17
UniRef50_Q3LWA2 Cluster: Ribosomal protein L44; n=1; Bigelowiell... 57 7e-07
UniRef50_A2DAI6 Cluster: 60S ribosomal protein L44, putative; n=... 56 1e-06
UniRef50_A3BKG6 Cluster: Putative uncharacterized protein; n=1; ... 55 3e-06
UniRef50_O15576 Cluster: Ribosomal protein L44; n=1; Entamoeba h... 50 1e-04
UniRef50_Q5KA45 Cluster: Putative uncharacterized protein; n=1; ... 44 0.006
UniRef50_Q9HIX1 Cluster: 50S ribosomal protein L44E; n=5; Archae... 37 0.84
UniRef50_A3BKG7 Cluster: Putative uncharacterized protein; n=1; ... 36 1.1
UniRef50_A0RZ36 Cluster: Ribosomal protein L44E; n=1; Cenarchaeu... 33 7.8
UniRef50_Q9YF00 Cluster: 50S ribosomal protein L44E; n=15; Therm... 33 7.8
>UniRef50_P48166 Cluster: 60S ribosomal protein L44; n=79;
Eukaryota|Rep: 60S ribosomal protein L44 -
Caenorhabditis elegans
Length = 105
Score = 102 bits (244), Expect = 1e-20
Identities = 49/96 (51%), Positives = 63/96 (65%)
Frame = +3
Query: 117 GRTAKNVNATKYTRYHSTKSPRKGTLPXXRRRYDRKQQGYGGQSKPIFXXXXXXXXXIVL 296
G+ K+ N K T+Y K ++ RRRYDRKQ G+GGQ+KPIF IVL
Sbjct: 14 GKCRKHTNH-KVTQY---KKGKESKFAQGRRRYDRKQSGFGGQTKPIFRKKAKTTKKIVL 69
Query: 297 RLECADCKVRSQVALKRCKHFELGGDKKRKGQMIQF 404
R+EC +CK + Q+ +KRCKHFELGG KK +GQ+IQF
Sbjct: 70 RMECTECKHKKQLPIKRCKHFELGGQKKSRGQVIQF 105
>UniRef50_Q969Q0 Cluster: 60S ribosomal protein L36a-like; n=88;
Eukaryota|Rep: 60S ribosomal protein L36a-like - Homo
sapiens (Human)
Length = 106
Score = 101 bits (241), Expect = 3e-20
Identities = 50/88 (56%), Positives = 59/88 (67%), Gaps = 2/88 (2%)
Frame = +3
Query: 147 KYTRYHSTKSPRKGTLPXXRRRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRLECAD--CK 320
K T+Y K + RRRYDRKQ GYGGQ+KPIF IVLRLEC + C+
Sbjct: 22 KVTQY---KKGKDSLYAQGRRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCR 78
Query: 321 VRSQVALKRCKHFELGGDKKRKGQMIQF 404
+ +A+KRCKHFELGGDKKRKGQ+IQF
Sbjct: 79 SKRMLAIKRCKHFELGGDKKRKGQVIQF 106
>UniRef50_P83881 Cluster: 60S ribosomal protein L36a; n=44;
Fungi/Metazoa group|Rep: 60S ribosomal protein L36a -
Homo sapiens (Human)
Length = 106
Score = 99 bits (238), Expect = 8e-20
Identities = 49/88 (55%), Positives = 59/88 (67%), Gaps = 2/88 (2%)
Frame = +3
Query: 147 KYTRYHSTKSPRKGTLPXXRRRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRLECAD--CK 320
K T+Y K + +RRYDRKQ GYGGQ+KPIF IVLRLEC + C+
Sbjct: 22 KVTQY---KKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCR 78
Query: 321 VRSQVALKRCKHFELGGDKKRKGQMIQF 404
+ +A+KRCKHFELGGDKKRKGQ+IQF
Sbjct: 79 SKRMLAIKRCKHFELGGDKKRKGQVIQF 106
>UniRef50_A7P2V5 Cluster: Chromosome chr1 scaffold_5, whole genome
shotgun sequence; n=9; Eukaryota|Rep: Chromosome chr1
scaffold_5, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 151
Score = 89.8 bits (213), Expect = 9e-17
Identities = 44/89 (49%), Positives = 54/89 (60%), Gaps = 2/89 (2%)
Frame = +3
Query: 129 KNVNATKYTRYHST--KSPRKGTLPXXRRRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRL 302
K+ K+T + T K + +RRYDRKQ GYGGQ+KP+F IVLRL
Sbjct: 59 KSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRL 118
Query: 303 ECADCKVRSQVALKRCKHFELGGDKKRKG 389
+C CK SQ +KRCKHFE+GGDKK KG
Sbjct: 119 QCQGCKHVSQHPIKRCKHFEIGGDKKGKG 147
>UniRef50_Q3LWA2 Cluster: Ribosomal protein L44; n=1; Bigelowiella
natans|Rep: Ribosomal protein L44 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 99
Score = 56.8 bits (131), Expect = 7e-07
Identities = 28/64 (43%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Frame = +3
Query: 177 PRKGTL-PXXRRRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRLECADCKVRSQVALKRCK 353
P K +L +RRYDRKQQGYGGQ+KP+F ++L C CK +LKR K
Sbjct: 28 PGKASLNAQGKRRYDRKQQGYGGQTKPVFRKQVKNTKKPSIKLSCEICKKEFIKSLKRTK 87
Query: 354 HFEL 365
F++
Sbjct: 88 RFQI 91
>UniRef50_A2DAI6 Cluster: 60S ribosomal protein L44, putative; n=1;
Trichomonas vaginalis G3|Rep: 60S ribosomal protein L44,
putative - Trichomonas vaginalis G3
Length = 104
Score = 56.4 bits (130), Expect = 1e-06
Identities = 27/61 (44%), Positives = 34/61 (55%)
Frame = +3
Query: 204 RRRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRLECADCKVRSQVALKRCKHFELGGDKKR 383
RRRYDRKQ+G+GG+ KPI I LR C CK + L R + FE +KK+
Sbjct: 38 RRRYDRKQKGFGGRVKPILRRSKKTSKKISLRFTCQSCKKATMYCLGRLRKFEWTVEKKK 97
Query: 384 K 386
K
Sbjct: 98 K 98
>UniRef50_A3BKG6 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 89
Score = 54.8 bits (126), Expect = 3e-06
Identities = 23/34 (67%), Positives = 27/34 (79%)
Frame = +3
Query: 288 IVLRLECADCKVRSQVALKRCKHFELGGDKKRKG 389
IVL+L+C CK SQ +KRCKHFE+GGDKK KG
Sbjct: 52 IVLKLQCQSCKHYSQHPIKRCKHFEIGGDKKGKG 85
>UniRef50_O15576 Cluster: Ribosomal protein L44; n=1; Entamoeba
histolytica|Rep: Ribosomal protein L44 - Entamoeba
histolytica
Length = 80
Score = 49.6 bits (113), Expect = 1e-04
Identities = 20/49 (40%), Positives = 29/49 (59%)
Frame = +3
Query: 204 RRRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRLECADCKVRSQVALKRC 350
+RRYDRKQQG+GGQ+KP+F + ++EC CK+ + C
Sbjct: 22 KRRYDRKQQGFGGQTKPVFKKKAKQQRRL-FKIECTKCKIAQSLRESTC 69
>UniRef50_Q5KA45 Cluster: Putative uncharacterized protein; n=1;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 147
Score = 44.0 bits (99), Expect = 0.006
Identities = 29/61 (47%), Positives = 34/61 (55%)
Frame = +1
Query: 196 PXXEDVMIVNSRVTVVSPNPSSKRRQKPLRKLCSVLSVQIAR*DHRLH*RDASTLSSVVT 375
P D ++ VTVV P+ SS RR +P R+L SV S AR DAST SSVVT
Sbjct: 42 PKESDDTTESNPVTVVRPSLSSTRRLRPPRRLSSVSSALSARPSTNSPSSDASTSSSVVT 101
Query: 376 R 378
R
Sbjct: 102 R 102
>UniRef50_Q9HIX1 Cluster: 50S ribosomal protein L44E; n=5;
Archaea|Rep: 50S ribosomal protein L44E - Thermoplasma
acidophilum
Length = 93
Score = 36.7 bits (81), Expect = 0.84
Identities = 24/71 (33%), Positives = 30/71 (42%), Gaps = 3/71 (4%)
Frame = +3
Query: 162 HSTKSPRK---GTLPXXRRRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRLECADCKVRSQ 332
HS + RK L +RR+ R GYGG +P F I LRL C +C
Sbjct: 20 HSVERVRKRKASELKAGQRRFRRVTSGYGGFPRPKFEGREKPTKRIALRLVCDECHKAIT 79
Query: 333 VALKRCKHFEL 365
R K FE+
Sbjct: 80 PPGIRAKKFEI 90
>UniRef50_A3BKG7 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 76
Score = 36.3 bits (80), Expect = 1.1
Identities = 13/18 (72%), Positives = 17/18 (94%)
Frame = +3
Query: 336 ALKRCKHFELGGDKKRKG 389
+++RCKHFE+GGDKK KG
Sbjct: 55 SVQRCKHFEIGGDKKGKG 72
>UniRef50_A0RZ36 Cluster: Ribosomal protein L44E; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L44E - Cenarchaeum
symbiosum
Length = 93
Score = 33.5 bits (73), Expect = 7.8
Identities = 18/64 (28%), Positives = 26/64 (40%)
Frame = +3
Query: 171 KSPRKGTLPXXRRRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRLECADCKVRSQVALKRC 350
K+ ++ RR+ ++GYGGQ P + L C DCK + R
Sbjct: 26 KAGKRRASAIGERRHAEDKKGYGGQKFPKLAKPAKVTKKVTRLLTCPDCKKKFNTYGLRV 85
Query: 351 KHFE 362
K FE
Sbjct: 86 KKFE 89
>UniRef50_Q9YF00 Cluster: 50S ribosomal protein L44E; n=15;
Thermoprotei|Rep: 50S ribosomal protein L44E - Aeropyrum
pernix
Length = 95
Score = 33.5 bits (73), Expect = 7.8
Identities = 19/65 (29%), Positives = 28/65 (43%)
Frame = +3
Query: 171 KSPRKGTLPXXRRRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRLECADCKVRSQVALKRC 350
++ ++ + RRY RKQ+GYG Q +P VL + C C + R
Sbjct: 26 RAGKRRAMALGERRYRRKQEGYGSQRRPEQKRFAKVTKKQVLVITCTVCGRKRPFLGIRL 85
Query: 351 KHFEL 365
K EL
Sbjct: 86 KRLEL 90
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 559,720,973
Number of Sequences: 1657284
Number of extensions: 8304040
Number of successful extensions: 17993
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 17157
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17792
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 85260991088
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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