Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP10_F_D06
(927 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M15661-1|AAA36589.1| 106|Homo sapiens protein ( Human ribosomal... 101 5e-21
CR542166-1|CAG46963.1| 106|Homo sapiens RPL36AL protein. 101 5e-21
BC107716-1|AAI07717.1| 106|Homo sapiens ribosomal protein L36a-... 101 5e-21
BC070207-1|AAH70207.1| 106|Homo sapiens ribosomal protein L36a-... 101 5e-21
BC003145-1|AAH03145.1| 106|Homo sapiens ribosomal protein L36a-... 101 5e-21
BC000741-1|AAH00741.1| 106|Homo sapiens ribosomal protein L36a-... 101 5e-21
AB063609-1|BAC19836.1| 106|Homo sapiens ribosomal protein L36a-... 101 5e-21
U78027-3|AAB64204.1| 106|Homo sapiens L44-like ribosomal protei... 99 1e-20
CR542198-1|CAG46995.1| 106|Homo sapiens RPL36A protein. 99 1e-20
BC070204-1|AAH70204.1| 106|Homo sapiens ribosomal protein L36a ... 99 1e-20
BC062219-1|AAH62219.1| 106|Homo sapiens ribosomal protein L36a ... 99 1e-20
BC031015-1|AAH31015.1| 106|Homo sapiens ribosomal protein L36a ... 99 1e-20
BC001781-1|AAH01781.1| 106|Homo sapiens ribosomal protein L36a ... 99 1e-20
AY927233-1|AAX08138.1| 106|Homo sapiens cell growth-inhibiting ... 99 1e-20
AY305871-1|AAQ95213.1| 106|Homo sapiens migration-inducing prot... 99 1e-20
AL035422-5|CAI42360.1| 106|Homo sapiens ribosomal protein L36a ... 99 1e-20
BC058160-1|AAH58160.1| 25|Homo sapiens LOC554234 protein protein. 44 6e-04
>M15661-1|AAA36589.1| 106|Homo sapiens protein ( Human ribosomal
protein mRNA, complete cds. ).
Length = 106
Score = 101 bits (241), Expect = 5e-21
Identities = 50/88 (56%), Positives = 59/88 (67%), Gaps = 2/88 (2%)
Frame = +3
Query: 147 KYTRYHSTKSPRKGTLPXXRRRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRLECAD--CK 320
K T+Y K + RRRYDRKQ GYGGQ+KPIF IVLRLEC + C+
Sbjct: 22 KVTQY---KKGKDSLYAQGRRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCR 78
Query: 321 VRSQVALKRCKHFELGGDKKRKGQMIQF 404
+ +A+KRCKHFELGGDKKRKGQ+IQF
Sbjct: 79 SKRMLAIKRCKHFELGGDKKRKGQVIQF 106
Score = 31.9 bits (69), Expect = 3.4
Identities = 16/36 (44%), Positives = 19/36 (52%)
Frame = +2
Query: 92 MVNVPKQRRTYXXXXXXXXXXXXSQYKKSKERHAAQ 199
MVNVPK RRT+ +QYKK K+ AQ
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQ 36
>CR542166-1|CAG46963.1| 106|Homo sapiens RPL36AL protein.
Length = 106
Score = 101 bits (241), Expect = 5e-21
Identities = 50/88 (56%), Positives = 59/88 (67%), Gaps = 2/88 (2%)
Frame = +3
Query: 147 KYTRYHSTKSPRKGTLPXXRRRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRLECAD--CK 320
K T+Y K + RRRYDRKQ GYGGQ+KPIF IVLRLEC + C+
Sbjct: 22 KVTQY---KKGKDSLYAQGRRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCR 78
Query: 321 VRSQVALKRCKHFELGGDKKRKGQMIQF 404
+ +A+KRCKHFELGGDKKRKGQ+IQF
Sbjct: 79 SKRMLAIKRCKHFELGGDKKRKGQVIQF 106
Score = 31.9 bits (69), Expect = 3.4
Identities = 16/36 (44%), Positives = 19/36 (52%)
Frame = +2
Query: 92 MVNVPKQRRTYXXXXXXXXXXXXSQYKKSKERHAAQ 199
MVNVPK RRT+ +QYKK K+ AQ
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQ 36
>BC107716-1|AAI07717.1| 106|Homo sapiens ribosomal protein
L36a-like protein.
Length = 106
Score = 101 bits (241), Expect = 5e-21
Identities = 50/88 (56%), Positives = 59/88 (67%), Gaps = 2/88 (2%)
Frame = +3
Query: 147 KYTRYHSTKSPRKGTLPXXRRRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRLECAD--CK 320
K T+Y K + RRRYDRKQ GYGGQ+KPIF IVLRLEC + C+
Sbjct: 22 KVTQY---KKGKDSLYAQGRRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCR 78
Query: 321 VRSQVALKRCKHFELGGDKKRKGQMIQF 404
+ +A+KRCKHFELGGDKKRKGQ+IQF
Sbjct: 79 SKRMLAIKRCKHFELGGDKKRKGQVIQF 106
Score = 31.9 bits (69), Expect = 3.4
Identities = 16/36 (44%), Positives = 19/36 (52%)
Frame = +2
Query: 92 MVNVPKQRRTYXXXXXXXXXXXXSQYKKSKERHAAQ 199
MVNVPK RRT+ +QYKK K+ AQ
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQ 36
>BC070207-1|AAH70207.1| 106|Homo sapiens ribosomal protein
L36a-like protein.
Length = 106
Score = 101 bits (241), Expect = 5e-21
Identities = 50/88 (56%), Positives = 59/88 (67%), Gaps = 2/88 (2%)
Frame = +3
Query: 147 KYTRYHSTKSPRKGTLPXXRRRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRLECAD--CK 320
K T+Y K + RRRYDRKQ GYGGQ+KPIF IVLRLEC + C+
Sbjct: 22 KVTQY---KKGKDSLYAQGRRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCR 78
Query: 321 VRSQVALKRCKHFELGGDKKRKGQMIQF 404
+ +A+KRCKHFELGGDKKRKGQ+IQF
Sbjct: 79 SKRMLAIKRCKHFELGGDKKRKGQVIQF 106
Score = 31.9 bits (69), Expect = 3.4
Identities = 16/36 (44%), Positives = 19/36 (52%)
Frame = +2
Query: 92 MVNVPKQRRTYXXXXXXXXXXXXSQYKKSKERHAAQ 199
MVNVPK RRT+ +QYKK K+ AQ
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQ 36
>BC003145-1|AAH03145.1| 106|Homo sapiens ribosomal protein
L36a-like protein.
Length = 106
Score = 101 bits (241), Expect = 5e-21
Identities = 50/88 (56%), Positives = 59/88 (67%), Gaps = 2/88 (2%)
Frame = +3
Query: 147 KYTRYHSTKSPRKGTLPXXRRRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRLECAD--CK 320
K T+Y K + RRRYDRKQ GYGGQ+KPIF IVLRLEC + C+
Sbjct: 22 KVTQY---KKGKDSLYAQGRRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCR 78
Query: 321 VRSQVALKRCKHFELGGDKKRKGQMIQF 404
+ +A+KRCKHFELGGDKKRKGQ+IQF
Sbjct: 79 SKRMLAIKRCKHFELGGDKKRKGQVIQF 106
Score = 31.9 bits (69), Expect = 3.4
Identities = 16/36 (44%), Positives = 19/36 (52%)
Frame = +2
Query: 92 MVNVPKQRRTYXXXXXXXXXXXXSQYKKSKERHAAQ 199
MVNVPK RRT+ +QYKK K+ AQ
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQ 36
>BC000741-1|AAH00741.1| 106|Homo sapiens ribosomal protein
L36a-like protein.
Length = 106
Score = 101 bits (241), Expect = 5e-21
Identities = 50/88 (56%), Positives = 59/88 (67%), Gaps = 2/88 (2%)
Frame = +3
Query: 147 KYTRYHSTKSPRKGTLPXXRRRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRLECAD--CK 320
K T+Y K + RRRYDRKQ GYGGQ+KPIF IVLRLEC + C+
Sbjct: 22 KVTQY---KKGKDSLYAQGRRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCR 78
Query: 321 VRSQVALKRCKHFELGGDKKRKGQMIQF 404
+ +A+KRCKHFELGGDKKRKGQ+IQF
Sbjct: 79 SKRMLAIKRCKHFELGGDKKRKGQVIQF 106
Score = 31.9 bits (69), Expect = 3.4
Identities = 16/36 (44%), Positives = 19/36 (52%)
Frame = +2
Query: 92 MVNVPKQRRTYXXXXXXXXXXXXSQYKKSKERHAAQ 199
MVNVPK RRT+ +QYKK K+ AQ
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQ 36
>AB063609-1|BAC19836.1| 106|Homo sapiens ribosomal protein
L36a-like protein.
Length = 106
Score = 101 bits (241), Expect = 5e-21
Identities = 50/88 (56%), Positives = 59/88 (67%), Gaps = 2/88 (2%)
Frame = +3
Query: 147 KYTRYHSTKSPRKGTLPXXRRRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRLECAD--CK 320
K T+Y K + RRRYDRKQ GYGGQ+KPIF IVLRLEC + C+
Sbjct: 22 KVTQY---KKGKDSLYAQGRRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCR 78
Query: 321 VRSQVALKRCKHFELGGDKKRKGQMIQF 404
+ +A+KRCKHFELGGDKKRKGQ+IQF
Sbjct: 79 SKRMLAIKRCKHFELGGDKKRKGQVIQF 106
Score = 31.9 bits (69), Expect = 3.4
Identities = 16/36 (44%), Positives = 19/36 (52%)
Frame = +2
Query: 92 MVNVPKQRRTYXXXXXXXXXXXXSQYKKSKERHAAQ 199
MVNVPK RRT+ +QYKK K+ AQ
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQ 36
>U78027-3|AAB64204.1| 106|Homo sapiens L44-like ribosomal protein
protein.
Length = 106
Score = 99 bits (238), Expect = 1e-20
Identities = 49/88 (55%), Positives = 59/88 (67%), Gaps = 2/88 (2%)
Frame = +3
Query: 147 KYTRYHSTKSPRKGTLPXXRRRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRLECAD--CK 320
K T+Y K + +RRYDRKQ GYGGQ+KPIF IVLRLEC + C+
Sbjct: 22 KVTQY---KKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCR 78
Query: 321 VRSQVALKRCKHFELGGDKKRKGQMIQF 404
+ +A+KRCKHFELGGDKKRKGQ+IQF
Sbjct: 79 SKRMLAIKRCKHFELGGDKKRKGQVIQF 106
Score = 31.9 bits (69), Expect = 3.4
Identities = 16/36 (44%), Positives = 19/36 (52%)
Frame = +2
Query: 92 MVNVPKQRRTYXXXXXXXXXXXXSQYKKSKERHAAQ 199
MVNVPK RRT+ +QYKK K+ AQ
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQ 36
>CR542198-1|CAG46995.1| 106|Homo sapiens RPL36A protein.
Length = 106
Score = 99 bits (238), Expect = 1e-20
Identities = 49/88 (55%), Positives = 59/88 (67%), Gaps = 2/88 (2%)
Frame = +3
Query: 147 KYTRYHSTKSPRKGTLPXXRRRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRLECAD--CK 320
K T+Y K + +RRYDRKQ GYGGQ+KPIF IVLRLEC + C+
Sbjct: 22 KVTQY---KKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCR 78
Query: 321 VRSQVALKRCKHFELGGDKKRKGQMIQF 404
+ +A+KRCKHFELGGDKKRKGQ+IQF
Sbjct: 79 SKRMLAIKRCKHFELGGDKKRKGQVIQF 106
Score = 31.9 bits (69), Expect = 3.4
Identities = 16/36 (44%), Positives = 19/36 (52%)
Frame = +2
Query: 92 MVNVPKQRRTYXXXXXXXXXXXXSQYKKSKERHAAQ 199
MVNVPK RRT+ +QYKK K+ AQ
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQ 36
>BC070204-1|AAH70204.1| 106|Homo sapiens ribosomal protein L36a
protein.
Length = 106
Score = 99 bits (238), Expect = 1e-20
Identities = 49/88 (55%), Positives = 59/88 (67%), Gaps = 2/88 (2%)
Frame = +3
Query: 147 KYTRYHSTKSPRKGTLPXXRRRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRLECAD--CK 320
K T+Y K + +RRYDRKQ GYGGQ+KPIF IVLRLEC + C+
Sbjct: 22 KVTQY---KKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCR 78
Query: 321 VRSQVALKRCKHFELGGDKKRKGQMIQF 404
+ +A+KRCKHFELGGDKKRKGQ+IQF
Sbjct: 79 SKRMLAIKRCKHFELGGDKKRKGQVIQF 106
Score = 31.9 bits (69), Expect = 3.4
Identities = 16/36 (44%), Positives = 19/36 (52%)
Frame = +2
Query: 92 MVNVPKQRRTYXXXXXXXXXXXXSQYKKSKERHAAQ 199
MVNVPK RRT+ +QYKK K+ AQ
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQ 36
>BC062219-1|AAH62219.1| 106|Homo sapiens ribosomal protein L36a
protein.
Length = 106
Score = 99 bits (238), Expect = 1e-20
Identities = 49/88 (55%), Positives = 59/88 (67%), Gaps = 2/88 (2%)
Frame = +3
Query: 147 KYTRYHSTKSPRKGTLPXXRRRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRLECAD--CK 320
K T+Y K + +RRYDRKQ GYGGQ+KPIF IVLRLEC + C+
Sbjct: 22 KVTQY---KKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCR 78
Query: 321 VRSQVALKRCKHFELGGDKKRKGQMIQF 404
+ +A+KRCKHFELGGDKKRKGQ+IQF
Sbjct: 79 SKRMLAIKRCKHFELGGDKKRKGQVIQF 106
Score = 31.9 bits (69), Expect = 3.4
Identities = 16/36 (44%), Positives = 19/36 (52%)
Frame = +2
Query: 92 MVNVPKQRRTYXXXXXXXXXXXXSQYKKSKERHAAQ 199
MVNVPK RRT+ +QYKK K+ AQ
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQ 36
>BC031015-1|AAH31015.1| 106|Homo sapiens ribosomal protein L36a
protein.
Length = 106
Score = 99 bits (238), Expect = 1e-20
Identities = 49/88 (55%), Positives = 59/88 (67%), Gaps = 2/88 (2%)
Frame = +3
Query: 147 KYTRYHSTKSPRKGTLPXXRRRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRLECAD--CK 320
K T+Y K + +RRYDRKQ GYGGQ+KPIF IVLRLEC + C+
Sbjct: 22 KVTQY---KKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCR 78
Query: 321 VRSQVALKRCKHFELGGDKKRKGQMIQF 404
+ +A+KRCKHFELGGDKKRKGQ+IQF
Sbjct: 79 SKRMLAIKRCKHFELGGDKKRKGQVIQF 106
Score = 31.9 bits (69), Expect = 3.4
Identities = 16/36 (44%), Positives = 19/36 (52%)
Frame = +2
Query: 92 MVNVPKQRRTYXXXXXXXXXXXXSQYKKSKERHAAQ 199
MVNVPK RRT+ +QYKK K+ AQ
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQ 36
>BC001781-1|AAH01781.1| 106|Homo sapiens ribosomal protein L36a
protein.
Length = 106
Score = 99 bits (238), Expect = 1e-20
Identities = 49/88 (55%), Positives = 59/88 (67%), Gaps = 2/88 (2%)
Frame = +3
Query: 147 KYTRYHSTKSPRKGTLPXXRRRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRLECAD--CK 320
K T+Y K + +RRYDRKQ GYGGQ+KPIF IVLRLEC + C+
Sbjct: 22 KVTQY---KKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCR 78
Query: 321 VRSQVALKRCKHFELGGDKKRKGQMIQF 404
+ +A+KRCKHFELGGDKKRKGQ+IQF
Sbjct: 79 SKRMLAIKRCKHFELGGDKKRKGQVIQF 106
Score = 31.9 bits (69), Expect = 3.4
Identities = 16/36 (44%), Positives = 19/36 (52%)
Frame = +2
Query: 92 MVNVPKQRRTYXXXXXXXXXXXXSQYKKSKERHAAQ 199
MVNVPK RRT+ +QYKK K+ AQ
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQ 36
>AY927233-1|AAX08138.1| 106|Homo sapiens cell growth-inhibiting
protein 15 protein.
Length = 106
Score = 99 bits (238), Expect = 1e-20
Identities = 49/88 (55%), Positives = 59/88 (67%), Gaps = 2/88 (2%)
Frame = +3
Query: 147 KYTRYHSTKSPRKGTLPXXRRRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRLECAD--CK 320
K T+Y K + +RRYDRKQ GYGGQ+KPIF IVLRLEC + C+
Sbjct: 22 KVTQY---KKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCR 78
Query: 321 VRSQVALKRCKHFELGGDKKRKGQMIQF 404
+ +A+KRCKHFELGGDKKRKGQ+IQF
Sbjct: 79 SKRMLAIKRCKHFELGGDKKRKGQVIQF 106
Score = 31.9 bits (69), Expect = 3.4
Identities = 16/36 (44%), Positives = 19/36 (52%)
Frame = +2
Query: 92 MVNVPKQRRTYXXXXXXXXXXXXSQYKKSKERHAAQ 199
MVNVPK RRT+ +QYKK K+ AQ
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQ 36
>AY305871-1|AAQ95213.1| 106|Homo sapiens migration-inducing protein
6 protein.
Length = 106
Score = 99 bits (238), Expect = 1e-20
Identities = 49/88 (55%), Positives = 59/88 (67%), Gaps = 2/88 (2%)
Frame = +3
Query: 147 KYTRYHSTKSPRKGTLPXXRRRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRLECAD--CK 320
K T+Y K + +RRYDRKQ GYGGQ+KPIF IVLRLEC + C+
Sbjct: 22 KVTQY---KKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCR 78
Query: 321 VRSQVALKRCKHFELGGDKKRKGQMIQF 404
+ +A+KRCKHFELGGDKKRKGQ+IQF
Sbjct: 79 SKRMLAIKRCKHFELGGDKKRKGQVIQF 106
Score = 31.9 bits (69), Expect = 3.4
Identities = 16/36 (44%), Positives = 19/36 (52%)
Frame = +2
Query: 92 MVNVPKQRRTYXXXXXXXXXXXXSQYKKSKERHAAQ 199
MVNVPK RRT+ +QYKK K+ AQ
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQ 36
>AL035422-5|CAI42360.1| 106|Homo sapiens ribosomal protein L36a
protein.
Length = 106
Score = 99 bits (238), Expect = 1e-20
Identities = 49/88 (55%), Positives = 59/88 (67%), Gaps = 2/88 (2%)
Frame = +3
Query: 147 KYTRYHSTKSPRKGTLPXXRRRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRLECAD--CK 320
K T+Y K + +RRYDRKQ GYGGQ+KPIF IVLRLEC + C+
Sbjct: 22 KVTQY---KKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCR 78
Query: 321 VRSQVALKRCKHFELGGDKKRKGQMIQF 404
+ +A+KRCKHFELGGDKKRKGQ+IQF
Sbjct: 79 SKRMLAIKRCKHFELGGDKKRKGQVIQF 106
Score = 31.9 bits (69), Expect = 3.4
Identities = 16/36 (44%), Positives = 19/36 (52%)
Frame = +2
Query: 92 MVNVPKQRRTYXXXXXXXXXXXXSQYKKSKERHAAQ 199
MVNVPK RRT+ +QYKK K+ AQ
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQ 36
>BC058160-1|AAH58160.1| 25|Homo sapiens LOC554234 protein protein.
Length = 25
Score = 44.4 bits (100), Expect = 6e-04
Identities = 18/24 (75%), Positives = 22/24 (91%)
Frame = +3
Query: 333 VALKRCKHFELGGDKKRKGQMIQF 404
+ +KR KHF+LGGDKKRKGQ+IQF
Sbjct: 2 LTIKRYKHFKLGGDKKRKGQVIQF 25
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,012,783
Number of Sequences: 237096
Number of extensions: 1508831
Number of successful extensions: 2713
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 2491
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2680
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12103451996
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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