Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_D04
         (884 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_01_0275 + 2121758-2122693                                           31   1.2  
03_05_0530 - 25306788-25306919,25307446-25308037,25308152-253089...    28   8.7  

>03_01_0275 + 2121758-2122693
          Length = 311

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 21/64 (32%), Positives = 25/64 (39%)
 Frame = -3

Query: 363 SSRRTPCRSSKGNIGLKEGNKIPFSS*NSSIAFNGSVQLVRASRKKVCPGTPTSSRPVPG 184
           SS   P  SS G I L     IP        A    + L+R  R    PG   SSRP   
Sbjct: 16  SSSPAPPVSSPGAIPLLRHTPIPHHRRRPLAALRTRIMLLRPLRAAASPGPAASSRPARD 75

Query: 183 SLLD 172
            ++D
Sbjct: 76  RVID 79


>03_05_0530 -
           25306788-25306919,25307446-25308037,25308152-25308975,
           25309533-25309592,25310115-25310180,25310318-25310461,
           25310616-25310756,25310898-25311056,25311818-25311884,
           25311986-25312158,25312237-25312333,25312410-25312528,
           25312867-25312951,25313120-25313321,25314456-25314633
          Length = 1012

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 14/44 (31%), Positives = 23/44 (52%)
 Frame = -1

Query: 674 EWRNFISKQ*LVVLPYLTLHPQYLCHCTVLCRELVPLDTYHLYV 543
           EWR     + +     L +H   + HC V+ +EL+ +D +H YV
Sbjct: 477 EWRGMDESRHMAADRRLGVH-FLVDHCNVIKKELLSVDPFHQYV 519


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,105,746
Number of Sequences: 37544
Number of extensions: 320671
Number of successful extensions: 633
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 621
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 633
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2503236492
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)