Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_D04
         (884 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68134-4|CAA92224.1|  567|Caenorhabditis elegans Hypothetical pr...    29   3.3  
AF098997-14|AAK71402.1|  321|Caenorhabditis elegans Serpentine r...    29   5.8  

>Z68134-4|CAA92224.1|  567|Caenorhabditis elegans Hypothetical
           protein T27A8.5 protein.
          Length = 567

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 15/36 (41%), Positives = 19/36 (52%)
 Frame = +3

Query: 357 GSTFIHQFWRNYVKNSLHTSTSLAIKITRIMTKNSK 464
           GS F  + W N  K+ LH ST L+I    I   N+K
Sbjct: 84  GSPFFSRGWANESKHHLHLSTLLSIDGVHIPGNNNK 119


>AF098997-14|AAK71402.1|  321|Caenorhabditis elegans Serpentine
           receptor, class i protein32 protein.
          Length = 321

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
 Frame = +2

Query: 20  YRESLKILNNF*AGNFNL-CYFLVVVNFI*DLFC 118
           Y  + + L NF   +FN  CY+LVVV     LFC
Sbjct: 172 YHRNFEELQNFAIFHFNSWCYYLVVVTISGGLFC 205


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,926,416
Number of Sequences: 27780
Number of extensions: 301217
Number of successful extensions: 673
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 646
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 673
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2234373834
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)