Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_D02
         (955 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    28   0.36 
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    27   0.63 
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            27   0.84 
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    25   4.5  

>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 28.3 bits (60), Expect = 0.36
 Identities = 29/113 (25%), Positives = 31/113 (27%), Gaps = 6/113 (5%)
 Frame = +3

Query: 276 PXXXETPPPGXGXP-PXGGGXPPPXXKXXXXGGPPPPXXXXKKXLSXXXXGXXXXXMXXX 452
           P     PP   G   P   G PPP       GGP P        LS              
Sbjct: 242 PGMQPRPPSAQGMQRPPMMGQPPPIRPPNPMGGPRPQISPQNSNLSGGMPSGMVGPPRPP 301

Query: 453 XXXQXGXP--PPXXF---FFXXPXXXXXXXVFXXKKXPPPPXGGGXFXXGPPP 596
              Q G P  PP      F+  P            +   PP G      GPPP
Sbjct: 302 MPMQGGAPGGPPQGMRPNFYNRP--------MGDPQTSRPPSGNDNMGGGPPP 346


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 27.5 bits (58), Expect = 0.63
 Identities = 12/26 (46%), Positives = 13/26 (50%)
 Frame = -3

Query: 875 GXAGGGXPXPXGGXXXFXXXGXGGGG 798
           G +GGG P   GG       G GGGG
Sbjct: 205 GGSGGGAPGGGGGSSGGPGPGGGGGG 230



 Score = 25.0 bits (52), Expect = 3.4
 Identities = 11/26 (42%), Positives = 11/26 (42%)
 Frame = -3

Query: 875 GXAGGGXPXPXGGXXXFXXXGXGGGG 798
           G  G G   P GG       G GGGG
Sbjct: 203 GGGGSGGGAPGGGGGSSGGPGPGGGG 228


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 27.1 bits (57), Expect = 0.84
 Identities = 17/63 (26%), Positives = 17/63 (26%)
 Frame = +2

Query: 734 GPXRXPPXPGXAGPXCXXXTXXPPPPXQXXXXXXPPXGGXGXPPPRXXXXXXXAXPPPXH 913
           GP   PP P   G          PPP         P        P        A PPP  
Sbjct: 526 GPLGPPPPPPPGGAVLNIPPQFLPPPLNLLRAPFFPLNPAQLRFPAGFPNLPNAQPPPAP 585

Query: 914 APP 922
            PP
Sbjct: 586 PPP 588



 Score = 25.4 bits (53), Expect = 2.6
 Identities = 9/17 (52%), Positives = 9/17 (52%)
 Frame = -1

Query: 526 PPPPPPXGXXKKKXXGG 476
           PPPPPP G       GG
Sbjct: 585 PPPPPPMGPPPSPLAGG 601



 Score = 23.8 bits (49), Expect = 7.8
 Identities = 9/19 (47%), Positives = 9/19 (47%)
 Frame = +3

Query: 549 PPPPXGGGXFXXGPPPXPP 605
           PPPP GG      P   PP
Sbjct: 532 PPPPPGGAVLNIPPQFLPP 550



 Score = 23.8 bits (49), Expect = 7.8
 Identities = 11/33 (33%), Positives = 11/33 (33%)
 Frame = +3

Query: 276 PXXXETPPPGXGXPPXGGGXPPPXXKXXXXGGP 374
           P      PP    PP   G PP        GGP
Sbjct: 574 PNLPNAQPPPAPPPPPPMGPPPSPLAGGPLGGP 606


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 24.6 bits (51), Expect = 4.5
 Identities = 14/42 (33%), Positives = 14/42 (33%)
 Frame = -3

Query: 923 GEGRXXGGGXRXXXXXGXAGGGXPXPXGGXXXFXXXGXGGGG 798
           G G   GGG       G   GG     GG       G  GGG
Sbjct: 533 GAGGMAGGGSDGPEYEGAGRGGVGSGIGGGGGGGGGGRAGGG 574


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 577,466
Number of Sequences: 2352
Number of extensions: 12329
Number of successful extensions: 55
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 46
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 104603103
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)