Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP10_F_D01
(904 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ... 103 8e-21
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi... 71 4e-11
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 66 9e-10
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ... 64 5e-09
UniRef50_UPI00015C63F8 Cluster: hypothetical protein CKO_pCKO3p0... 55 2e-06
UniRef50_UPI00015C640B Cluster: hypothetical protein CKO_pCKO2p0... 54 5e-06
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 52 2e-05
UniRef50_P03087 Cluster: Capsid protein VP1; n=1927; Polyomaviru... 45 0.002
UniRef50_Q8GUF1 Cluster: Reverse transcriptase; n=1; Cicer ariet... 39 0.20
UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 38 0.35
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 38 0.46
UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1; ... 37 0.81
UniRef50_O33369 Cluster: Uncharacterized protein ORF2; n=5; Neis... 34 5.7
UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1; ... 33 7.5
>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
root|Rep: Putative uncharacterized protein - Salmonella
typhimurium
Length = 127
Score = 103 bits (246), Expect = 8e-21
Identities = 60/110 (54%), Positives = 64/110 (58%)
Frame = +1
Query: 478 SKRPGTVKRPRCWRFSIGSAPLTSITKIDAQVRXGETRQDYKDTRRXPXKLPRALSCSDP 657
SK+ T R RFSIGSAPLTSITKIDAQVR GETRQDYKDTRR P + P P
Sbjct: 2 SKKQSTGTSQRRCRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 61
Query: 658 AAYRDTCPPFSPXGKRGAFXIXSPXXGISXRCRSFXXXLGXCXPNPXXXP 807
DTCPPFS + F I + GIS RCRSF C NP P
Sbjct: 62 CRLPDTCPPFS-LREAWRFLI-AHAVGISVRCRSFAPSWAVC-TNPPFSP 108
>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
organisms|Rep: Predicted protein - Nematostella
vectensis
Length = 97
Score = 70.9 bits (166), Expect = 4e-11
Identities = 34/46 (73%), Positives = 36/46 (78%)
Frame = +1
Query: 496 VKRPRCWRFSIGSAPLTSITKIDAQVRXGETRQDYKDTRRXPXKLP 633
V+ PR RFSIGSAPLTSITK DAQ+ GETRQDYKDTRR P P
Sbjct: 44 VRGPRQSRFSIGSAPLTSITKSDAQISGGETRQDYKDTRRFPLAAP 89
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 66.5 bits (155), Expect = 9e-10
Identities = 32/44 (72%), Positives = 33/44 (75%)
Frame = +1
Query: 502 RPRCWRFSIGSAPLTSITKIDAQVRXGETRQDYKDTRRXPXKLP 633
RPR RFSIGSAPLTSI K DAQ+ GETRQDYKD RR P P
Sbjct: 78 RPRRSRFSIGSAPLTSIAKSDAQISGGETRQDYKDPRRFPLVAP 121
Score = 52.8 bits (121), Expect = 1e-05
Identities = 23/33 (69%), Positives = 26/33 (78%)
Frame = +3
Query: 309 RGEAVCVLGALPLPRSLTRCARSFGCGERYQLT 407
R +C G +PLPRSLTR ARSFGCGERY+LT
Sbjct: 26 RVSRICDTGDIPLPRSLTRYARSFGCGERYRLT 58
>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
root|Rep: Putative uncharacterized protein - Escherichia
coli
Length = 61
Score = 64.1 bits (149), Expect = 5e-09
Identities = 39/60 (65%), Positives = 40/60 (66%)
Frame = -3
Query: 551 MLVRGAEPMEKRQQRGLFTVPGLLLAFCSHVLSCVIP*XLWITVLPPLSELIPLAAAERP 372
MLVRGAEPMEKR + L V LL CS L P LWITVLPPLSEL PLAA ERP
Sbjct: 1 MLVRGAEPMEKRLRCWLLPVLCFLLT-CSFRL---YPLILWITVLPPLSELTPLAAVERP 56
>UniRef50_UPI00015C63F8 Cluster: hypothetical protein
CKO_pCKO3p06146; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO3p06146 -
Citrobacter koseri ATCC BAA-895
Length = 125
Score = 55.2 bits (127), Expect = 2e-06
Identities = 33/64 (51%), Positives = 34/64 (53%)
Frame = +1
Query: 571 VRXGETRQDYKDTRRXPXKLPRALSCSDPAAYRDTCPPFSPXGKRGAFXIXSPXXGISXR 750
VR GETRQD K LP ALSCS+PA R PPFS G S GIS R
Sbjct: 23 VRSGETRQDLKIITVSDESLPLALSCSNPAVSRIPVPPFSLAG--SVALSHSSHSGISAR 80
Query: 751 CRSF 762
CRSF
Sbjct: 81 CRSF 84
>UniRef50_UPI00015C640B Cluster: hypothetical protein
CKO_pCKO2p07168; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO2p07168 -
Citrobacter koseri ATCC BAA-895
Length = 99
Score = 54.0 bits (124), Expect = 5e-06
Identities = 25/39 (64%), Positives = 29/39 (74%)
Frame = -1
Query: 697 PKGRKADRYPGKRQGRNRRAHEGAXRGNAWYLYSPVGFR 581
PKG+KA++ GKRQGRNRRAHEGA + SPVGFR
Sbjct: 57 PKGKKAEQVSGKRQGRNRRAHEGAAGEKSPASLSPVGFR 95
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 52.0 bits (119), Expect = 2e-05
Identities = 29/54 (53%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Frame = +3
Query: 285 CINESXNARGEAVCVLGALPLPRSLTRCARSFGCGERYQL-TQRR*YGYPQXSG 443
CI + AR EAV VL ALPL RS TRC RS GCG + R YG PQ G
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQG 319
>UniRef50_P03087 Cluster: Capsid protein VP1; n=1927;
Polyomavirus|Rep: Capsid protein VP1 - Simian virus 40
(SV40)
Length = 364
Score = 45.2 bits (102), Expect = 0.002
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = +1
Query: 88 DPDMIRYIDEFGQTTTRMQ 144
DPDMIRYIDEFGQTTTRMQ
Sbjct: 346 DPDMIRYIDEFGQTTTRMQ 364
>UniRef50_Q8GUF1 Cluster: Reverse transcriptase; n=1; Cicer
arietinum|Rep: Reverse transcriptase - Cicer arietinum
(Chickpea) (Garbanzo)
Length = 37
Score = 38.7 bits (86), Expect = 0.20
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +1
Query: 418 NTVIHXNQGITQERTCE 468
NTVIH NQGITQERTCE
Sbjct: 21 NTVIHXNQGITQERTCE 37
>UniRef50_P03023 Cluster: Lactose operon repressor; n=24;
Enterobacteriaceae|Rep: Lactose operon repressor -
Escherichia coli (strain K12)
Length = 360
Score = 37.9 bits (84), Expect = 0.35
Identities = 18/24 (75%), Positives = 20/24 (83%)
Frame = -1
Query: 355 ERGSGRAPNTQTASPRALXDSLMQ 284
+R + APNTQTASPRAL DSLMQ
Sbjct: 325 KRKTTLAPNTQTASPRALADSLMQ 348
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 37.5 bits (83), Expect = 0.46
Identities = 15/17 (88%), Positives = 16/17 (94%)
Frame = +1
Query: 283 SALMNRXTRGERRFAYW 333
+ALMNR TRGERRFAYW
Sbjct: 25 AALMNRPTRGERRFAYW 41
>UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1;
Beggiatoa sp. SS|Rep: Putative uncharacterized protein -
Beggiatoa sp. SS
Length = 114
Score = 36.7 bits (81), Expect = 0.81
Identities = 21/66 (31%), Positives = 31/66 (46%)
Frame = +1
Query: 436 NQGITQERTCEQKASKRPGTVKRPRCWRFSIGSAPLTSITKIDAQVRXGETRQDYKDTRR 615
N I +R + + + P T F S PLT+ITKI Q + +T+ +YK T
Sbjct: 41 NHKIMHQRALIRNSPQTPRTYNYTLSSLFPYNSPPLTTITKIYPQFKNTQTQHNYKYTTP 100
Query: 616 XPXKLP 633
P + P
Sbjct: 101 FPLQSP 106
>UniRef50_O33369 Cluster: Uncharacterized protein ORF2; n=5;
Neisseria|Rep: Uncharacterized protein ORF2 - Neisseria
gonorrhoeae
Length = 417
Score = 33.9 bits (74), Expect = 5.7
Identities = 23/61 (37%), Positives = 31/61 (50%), Gaps = 8/61 (13%)
Frame = +1
Query: 544 TSITKIDAQVRXGETRQD--YKDTRRXPXKLPRALSC------SDPAAYRDTCPPFSPXG 699
T + KI +++ GET D Y+ TRR + ALS S+PA + DTC P P
Sbjct: 241 TYLQKIAERLKTGETGDDIEYRITRRRAHEHTAALSSTLSDMSSEPAKFADTCNPALPCS 300
Query: 700 K 702
K
Sbjct: 301 K 301
>UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1;
Methanocorpusculum labreanum Z|Rep: Putative
uncharacterized protein - Methanocorpusculum labreanum
(strain ATCC 43576 / DSM 4855 / Z)
Length = 109
Score = 33.5 bits (73), Expect = 7.5
Identities = 21/55 (38%), Positives = 28/55 (50%)
Frame = -2
Query: 246 KMNAIVVVNLFIAAYNGYK*SNSITNFTNKAFFSLHSSCGLSKLINVSYHVWIXL 82
+MNA V + FIAA + +T + AFF L S G ++VSY VW L
Sbjct: 27 RMNAWVDLAAFIAAV-----ATCVTGYVLWAFFPLGSGRGAMNFLDVSYQVWYDL 76
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 691,962,567
Number of Sequences: 1657284
Number of extensions: 12233016
Number of successful extensions: 30568
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 28965
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30517
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 81981722200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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