Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_D01
         (904 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF160940-1|AAD46880.1| 1260|Drosophila melanogaster BcDNA.LD1916...    30   3.8  
AE014297-55|AAF52146.1| 1260|Drosophila melanogaster CG9776-PA, ...    30   3.8  
U31961-5|AAA84404.1|  424|Drosophila melanogaster protein ( Dros...    29   6.6  
AE014297-2268|AAF55361.3|  417|Drosophila melanogaster CG10349-P...    29   6.6  
AE014296-3356|AAF51592.1| 2284|Drosophila melanogaster CG5847-PA...    29   8.7  

>AF160940-1|AAD46880.1| 1260|Drosophila melanogaster BcDNA.LD19168
           protein.
          Length = 1260

 Score = 30.3 bits (65), Expect = 3.8
 Identities = 14/39 (35%), Positives = 19/39 (48%)
 Frame = -1

Query: 724 RXXRKRHASPKGRKADRYPGKRQGRNRRAHEGAXRGNAW 608
           R  R R  SP+ R++    G+R GR+R       RG  W
Sbjct: 103 RFDRDRRRSPERRRSPPRRGRRYGRSRSRSMSPRRGGRW 141


>AE014297-55|AAF52146.1| 1260|Drosophila melanogaster CG9776-PA,
           isoform A protein.
          Length = 1260

 Score = 30.3 bits (65), Expect = 3.8
 Identities = 14/39 (35%), Positives = 19/39 (48%)
 Frame = -1

Query: 724 RXXRKRHASPKGRKADRYPGKRQGRNRRAHEGAXRGNAW 608
           R  R R  SP+ R++    G+R GR+R       RG  W
Sbjct: 103 RFDRDRRRSPERRRSPPRRGRRYGRSRSRSMSPRRGGRW 141


>U31961-5|AAA84404.1|  424|Drosophila melanogaster protein (
           Drosophila melanogasterbithorax complex (BX-C), complete
           sequence. ).
          Length = 424

 Score = 29.5 bits (63), Expect = 6.6
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = +3

Query: 294 ESXNARGEAVCVLGALPLPRSLTRCARSFGCG 389
           ES      +VC  G LP+P  L  C +  GCG
Sbjct: 340 ESYQTTSASVCHSGWLPVPGHLAGCGQRRGCG 371


>AE014297-2268|AAF55361.3|  417|Drosophila melanogaster CG10349-PA
           protein.
          Length = 417

 Score = 29.5 bits (63), Expect = 6.6
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = +3

Query: 294 ESXNARGEAVCVLGALPLPRSLTRCARSFGCG 389
           ES      +VC  G LP+P  L  C +  GCG
Sbjct: 333 ESYQTTSASVCHSGWLPVPGHLAGCGQRRGCG 364


>AE014296-3356|AAF51592.1| 2284|Drosophila melanogaster CG5847-PA
            protein.
          Length = 2284

 Score = 29.1 bits (62), Expect = 8.7
 Identities = 18/82 (21%), Positives = 34/82 (41%), Gaps = 2/82 (2%)
 Frame = +1

Query: 448  TQERTCEQKASKRPGTVKRPRCWRFSIGS-APLTSITKIDAQVRXGETRQDYKDTRRXPX 624
            + + +C+   +++P T  +P C+  S  S  P T  T    +   G T  D +     P 
Sbjct: 776  SSDPSCQPPTTRKPITTPKPNCYPGSTDSRCPQTPRTTQQPRCYPGSTDPDCQPATYLPP 835

Query: 625  KLPR-ALSCSDPAAYRDTCPPF 687
               R  ++ + P  Y  +  P+
Sbjct: 836  TTARTTITTAKPRCYPGSSDPY 857


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,691,628
Number of Sequences: 53049
Number of extensions: 588017
Number of successful extensions: 1431
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1269
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1429
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4403028645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)