Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_C24
         (926 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_01_0432 - 3144560-3144655,3144792-3144832,3145019-3145094,314...    32   0.56 
05_01_0356 + 2785410-2785670,2785843-2785960,2786800-2786891,278...    31   1.3  
07_03_1483 + 26881032-26882035,26882130-26882204,26882324-268828...    30   2.3  
04_04_0254 - 23951495-23951902,23952000-23952155,23952344-239524...    29   5.2  
07_01_0959 + 8055700-8055847,8056216-8056529,8057455-8057898           28   9.2  

>02_01_0432 -
           3144560-3144655,3144792-3144832,3145019-3145094,
           3145465-3145542,3146121-3146208,3146613-3146686,
           3147445-3147579,3147699-3147770,3148239-3148325,
           3148418-3148522,3149028-3149085,3149576-3149634,
           3149960-3150056,3150217-3150317,3150443-3150487,
           3150619-3150681,3151082-3151147,3151286-3151342,
           3151570-3151656,3152063-3152239,3152413-3152625
          Length = 624

 Score = 32.3 bits (70), Expect = 0.56
 Identities = 15/42 (35%), Positives = 19/42 (45%)
 Frame = -1

Query: 743 RXRLDEPIPLAPPNDRAQXVSERGNXXAPNTQTASPRGLADS 618
           R R   P+P APP  RA   + RG    P    +SP    D+
Sbjct: 23  RRRPAAPLPSAPPRPRALSAAPRGRVVCPAAPASSPASTTDA 64


>05_01_0356 +
           2785410-2785670,2785843-2785960,2786800-2786891,
           2787114-2787176,2787299-2787397,2787726-2787884,
           2788420-2788491,2788567-2788699,2788813-2788877,
           2789016-2789091,2789236-2789337,2789524-2789716,
           2790576-2790654,2792939-2793007,2793261-2793311,
           2793680-2793742,2793926-2794041,2794263-2794347,
           2794898-2794957,2795594-2795639,2796011-2796084,
           2796350-2796400,2796474-2796674,2796747-2796791,
           2797063-2797156,2797226-2797371,2797510-2797739,
           2798136-2798196,2798290-2798347,2799020-2799513
          Length = 1151

 Score = 31.1 bits (67), Expect = 1.3
 Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
 Frame = -2

Query: 295 REVSVLFVQSHELGSSRHGELVSAGT--RRHGDRSCCLASHHQRDCHAVVVDLFQ 137
           +E S++F Q+   G    G+ + A     R+ +  CC+ASH  +    + +DL Q
Sbjct: 624 KEFSLIFSQAPNRGGKAPGDSLDAQRWWNRYVEAQCCIASHDYKGGLDIYLDLMQ 678


>07_03_1483 +
           26881032-26882035,26882130-26882204,26882324-26882861,
           26883999-26884895,26885178-26885327,26885459-26885791,
           26886501-26886695,26887805-26887918
          Length = 1101

 Score = 30.3 bits (65), Expect = 2.3
 Identities = 13/23 (56%), Positives = 16/23 (69%), Gaps = 1/23 (4%)
 Frame = -3

Query: 156 LWLT-SSKALGLGIIICHPGCKL 91
           LWL  +S ++G G IICH GC L
Sbjct: 336 LWLVQNSNSIGQGYIICHLGCHL 358


>04_04_0254 -
           23951495-23951902,23952000-23952155,23952344-23952485,
           23952772-23953160,23953833-23953948,23954290-23954371
          Length = 430

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 18/54 (33%), Positives = 22/54 (40%), Gaps = 1/54 (1%)
 Frame = -2

Query: 223 GTRRHGDRSCCLASHHQRDCHAVVVDLFQSLG-PGYYYLPSWLQVAISLFIHNL 65
           G   HG   C L +H         +D     G  G  YL SWLQ+A+   I  L
Sbjct: 116 GENFHGKIGCILRNHSGISLKTFKLDYSGMCGFDGTSYLDSWLQIALKPGIEEL 169


>07_01_0959 + 8055700-8055847,8056216-8056529,8057455-8057898
          Length = 301

 Score = 28.3 bits (60), Expect = 9.2
 Identities = 13/34 (38%), Positives = 16/34 (47%)
 Frame = +1

Query: 694 ARSFGGASGIGSSRRYRVQXGXPPXXGXXPPKKI 795
           A+  GGA+ +G  RR R     PP     PP  I
Sbjct: 118 AKRRGGAAALGGERRRRYPHPPPPSFSPPPPSLI 151


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,238,721
Number of Sequences: 37544
Number of extensions: 340042
Number of successful extensions: 934
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 914
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 934
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2647531240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)