Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_C22
         (884 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small...    42   2e-05
EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.            35   0.003
AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    25   4.1  
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.    24   5.4  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            24   7.1  
Z69980-1|CAA93820.1|  134|Anopheles gambiae GTP-binding protein ...    23   9.4  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         23   9.4  

>AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small
           GTPase protein.
          Length = 190

 Score = 42.3 bits (95), Expect = 2e-05
 Identities = 24/68 (35%), Positives = 35/68 (51%)
 Frame = +2

Query: 362 KSAITIQFFQKLFVTDYDPTIEDSYIQHTEVDGQWCILDVLDTAGQEEFSAMREQYMRKG 541
           K+ + I +    F  +Y PT  D+Y     VDG    L + DTAGQE++  +R     + 
Sbjct: 19  KTCMLISYTTDSFPGEYVPTSFDNYSAPMVVDGVQVSLGLWDTAGQEDYDRLRPLSYPQT 78

Query: 542 DGFLIVFS 565
           D FLI +S
Sbjct: 79  DVFLICYS 86


>EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.
          Length = 213

 Score = 35.1 bits (77), Expect = 0.003
 Identities = 22/92 (23%), Positives = 42/92 (45%), Gaps = 2/92 (2%)
 Frame = +2

Query: 293 RPGPPNEN-LPTVKLXXXXXXXXXKSAITIQFFQKLFVTDYDPTIEDSYIQHTE-VDGQW 466
           RP    +N +   KL         KS++ ++F +  F    + TI  +++  T  +D   
Sbjct: 13  RPNGATQNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTLCIDDTT 72

Query: 467 CILDVLDTAGQEEFSAMREQYMRKGDGFLIVF 562
              ++ DTAGQE + ++   Y R     ++V+
Sbjct: 73  VKFEIWDTAGQERYHSLAPMYYRGAQAAIVVY 104


>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
           protein.
          Length = 1253

 Score = 24.6 bits (51), Expect = 4.1
 Identities = 10/39 (25%), Positives = 20/39 (51%)
 Frame = +2

Query: 434 YIQHTEVDGQWCILDVLDTAGQEEFSAMREQYMRKGDGF 550
           Y+Q+ + + +W    +L    + E+SA  + Y    +GF
Sbjct: 491 YVQYDQGEDRWLCTLLLKQKFRVEYSAASDAYTHAPEGF 529


>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
          Length = 1036

 Score = 24.2 bits (50), Expect = 5.4
 Identities = 15/39 (38%), Positives = 18/39 (46%)
 Frame = +1

Query: 259 CGGTSSGLKNDSARATQRKSSYRETGGSR*WWSR*ECDH 375
           C    S +KN    AT R S YR    +  W+SR   DH
Sbjct: 64  CDNVISYIKNGKDSATIRISIYRNNERAVRWFSR-SFDH 101


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 23.8 bits (49), Expect = 7.1
 Identities = 11/31 (35%), Positives = 11/31 (35%)
 Frame = +3

Query: 735 PPXT*RPXPXDPPFXXXXAXPXXGPXHPXPP 827
           PP    P P  PP       P  GP    PP
Sbjct: 582 PPAPPPPPPMGPPPSPLAGGPLGGPAGSRPP 612


>Z69980-1|CAA93820.1|  134|Anopheles gambiae GTP-binding protein
           protein.
          Length = 134

 Score = 23.4 bits (48), Expect = 9.4
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +2

Query: 488 TAGQEEFSAMREQYMRKGDGFLIVFS 565
           +AGQE++  +R     + D FL+ FS
Sbjct: 1   SAGQEDYDRLRPLSYPQTDVFLVCFS 26


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 23.4 bits (48), Expect = 9.4
 Identities = 10/34 (29%), Positives = 17/34 (50%)
 Frame = -2

Query: 451 FCMLYVRVLNSRIIICHKQLLEELDGDRTLTYST 350
           FCM+Y  +L +R  +       + + +R   YST
Sbjct: 363 FCMVYTTLLQARATVASVFAQHDTELERIKRYST 396


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 760,962
Number of Sequences: 2352
Number of extensions: 13283
Number of successful extensions: 27
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 95093730
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)