Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP10_F_C22
(884 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z35719-7|CAA84796.1| 211|Caenorhabditis elegans Hypothetical pr... 124 8e-29
U80675-1|AAB38969.1| 211|Caenorhabditis elegans GTP binding pro... 124 8e-29
Z68302-3|CAA92630.1| 184|Caenorhabditis elegans Hypothetical pr... 104 1e-22
M55535-1|AAA28103.1| 187|Caenorhabditis elegans ras protein pro... 104 1e-22
U56933-1|AAB66712.1| 212|Caenorhabditis elegans GTP binding pro... 102 4e-22
U56930-1|AAB03320.1| 212|Caenorhabditis elegans R-ras1 homolog ... 102 4e-22
CU457742-2|CAM36363.1| 168|Caenorhabditis elegans Hypothetical ... 102 4e-22
CU457742-1|CAM36362.1| 212|Caenorhabditis elegans Hypothetical ... 102 4e-22
Z54236-8|CAA90983.1| 188|Caenorhabditis elegans Hypothetical pr... 100 1e-21
Z81039-10|CAB02777.2| 181|Caenorhabditis elegans Hypothetical p... 89 3e-18
AC024809-6|AAF59545.1| 213|Caenorhabditis elegans Ral (ras-rela... 85 8e-17
Z73103-10|CAA97427.2| 205|Caenorhabditis elegans Hypothetical p... 79 4e-15
Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical pr... 57 2e-08
Z22178-5|CAA80155.1| 207|Caenorhabditis elegans Hypothetical pr... 49 4e-06
X68492-1|CAA48506.1| 191|Caenorhabditis elegans small ras-relat... 48 9e-06
L04287-1|AAA28141.1| 191|Caenorhabditis elegans rac1 protein pr... 48 9e-06
L03711-1|AAA28140.1| 191|Caenorhabditis elegans rac1 protein pr... 48 9e-06
AF226867-1|AAF33846.1| 191|Caenorhabditis elegans cell-corpse e... 48 9e-06
AF038608-16|AAC25821.1| 191|Caenorhabditis elegans Cell death a... 48 9e-06
U23452-10|AAK31543.1| 191|Caenorhabditis elegans Hypothetical p... 48 1e-05
S82771-1|AAC05600.1| 191|Caenorhabditis elegans cdc42 homolog p... 48 1e-05
L36965-1|AAC37216.1| 192|Caenorhabditis elegans guanine nucleot... 47 2e-05
AL132952-3|CAB63379.1| 192|Caenorhabditis elegans Hypothetical ... 47 2e-05
L10078-1|AAA51433.1| 188|Caenorhabditis elegans guanine nucleot... 46 4e-05
U64600-3|AAK39204.1| 656|Caenorhabditis elegans Temporarily ass... 46 5e-05
Z79601-4|CAB01884.1| 210|Caenorhabditis elegans Hypothetical pr... 45 6e-05
AF101310-3|AAC69218.1| 205|Caenorhabditis elegans Rab family pr... 45 6e-05
AC024853-3|ABP57809.1| 244|Caenorhabditis elegans Hypothetical ... 45 8e-05
Z78417-3|CAB01691.1| 195|Caenorhabditis elegans Hypothetical pr... 44 1e-04
U82288-1|AAC47729.1| 195|Caenorhabditis elegans Rac-like GTPase... 44 1e-04
AF038608-15|AAC25820.1| 129|Caenorhabditis elegans Cell death a... 44 1e-04
U97191-2|AAB52431.1| 214|Caenorhabditis elegans Uncoordinated p... 44 2e-04
AL117202-19|CAB57899.1| 209|Caenorhabditis elegans Hypothetical... 43 3e-04
Z82276-7|CAB05247.2| 195|Caenorhabditis elegans Hypothetical pr... 42 4e-04
U55018-1|AAB40386.1| 195|Caenorhabditis elegans CeRac2 protein. 42 4e-04
Z66499-1|CAA91296.1| 207|Caenorhabditis elegans Hypothetical pr... 41 0.001
AC024875-5|AAM44401.1| 203|Caenorhabditis elegans Rab family pr... 41 0.001
Z81516-4|CAB04205.1| 208|Caenorhabditis elegans Hypothetical pr... 41 0.001
U68256-1|AAB16971.1| 123|Caenorhabditis elegans rab8-like protein. 39 0.005
AF106592-3|AAK21367.2| 211|Caenorhabditis elegans Rab family pr... 39 0.005
AB112929-1|BAD07034.1| 211|Caenorhabditis elegans Rab8 protein. 39 0.005
U80033-5|AAC48200.1| 201|Caenorhabditis elegans Rab family prot... 38 0.007
U68257-1|AAB16972.1| 124|Caenorhabditis elegans rab10-like prot... 38 0.007
AL021475-2|CAA16313.1| 187|Caenorhabditis elegans Hypothetical ... 38 0.010
AL031254-1|CAA20282.1| 395|Caenorhabditis elegans Hypothetical ... 37 0.017
Z66516-6|CAA91357.1| 209|Caenorhabditis elegans Hypothetical pr... 37 0.022
U97592-7|AAB52874.2| 332|Caenorhabditis elegans Sperm-specific ... 37 0.022
AC024859-6|AAK29982.1| 195|Caenorhabditis elegans Hypothetical ... 37 0.022
AL132865-6|CAB60605.1| 210|Caenorhabditis elegans Hypothetical ... 36 0.029
U39996-4|AAA81090.2| 266|Caenorhabditis elegans Hypothetical pr... 36 0.039
AL032621-1|CAA21489.1| 216|Caenorhabditis elegans Hypothetical ... 36 0.039
Z92830-4|CAB07357.1| 203|Caenorhabditis elegans Hypothetical pr... 36 0.051
Z72506-10|CAA96623.1| 364|Caenorhabditis elegans Hypothetical p... 36 0.051
Z72506-8|CAC42277.1| 199|Caenorhabditis elegans Hypothetical pr... 36 0.051
Z71263-8|CAA95826.1| 364|Caenorhabditis elegans Hypothetical pr... 36 0.051
Z11505-4|CAA77590.1| 205|Caenorhabditis elegans Hypothetical pr... 36 0.051
U68266-1|AAB16981.1| 219|Caenorhabditis elegans RAB-3 protein. 36 0.051
U68265-1|AAB16980.1| 219|Caenorhabditis elegans RAB-3 protein. 36 0.051
U28944-15|AAK68196.1| 219|Caenorhabditis elegans Rab family pro... 36 0.051
U28944-14|AAK68195.1| 233|Caenorhabditis elegans Rab family pro... 36 0.051
AB112928-1|BAD07033.1| 219|Caenorhabditis elegans Rab3 protein. 36 0.051
AL110500-4|CAB54484.1| 215|Caenorhabditis elegans Hypothetical ... 35 0.067
AB112930-1|BAD07035.1| 215|Caenorhabditis elegans Rab27 protein. 35 0.067
Z47808-1|CAA87774.2| 229|Caenorhabditis elegans Hypothetical pr... 34 0.12
AC024875-6|AAK29988.3| 193|Caenorhabditis elegans Rab family pr... 34 0.16
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 33 0.27
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 33 0.27
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 33 0.27
AF000192-2|AAB52888.1| 196|Caenorhabditis elegans Rab family pr... 33 0.27
AB162902-1|BAD32698.1| 196|Caenorhabditis elegans Rab37 protein. 33 0.27
U43283-2|AAC69020.1| 205|Caenorhabditis elegans Rab family prot... 33 0.36
U68258-1|AAB16973.1| 127|Caenorhabditis elegans rab11-like prot... 32 0.47
AF003139-1|AAB54158.1| 211|Caenorhabditis elegans Rab family pr... 32 0.47
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 31 1.1
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 31 1.1
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 31 1.1
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 31 1.1
Z92803-6|CAB07240.1| 215|Caenorhabditis elegans Hypothetical pr... 31 1.4
U68252-1|AAB16967.1| 66|Caenorhabditis elegans rab2-like protein. 31 1.4
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 31 1.4
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 31 1.4
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 31 1.4
Z93391-6|CAJ85753.1| 198|Caenorhabditis elegans Hypothetical pr... 30 2.5
Z49068-2|CAA88855.1| 389|Caenorhabditis elegans Hypothetical pr... 30 2.5
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 29 3.3
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 29 3.3
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 29 4.4
U00065-10|AAA50733.2| 382|Caenorhabditis elegans Hypothetical p... 29 5.8
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 28 7.7
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 28 7.7
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 28 7.7
>Z35719-7|CAA84796.1| 211|Caenorhabditis elegans Hypothetical
protein F17C8.4 protein.
Length = 211
Score = 124 bits (299), Expect = 8e-29
Identities = 59/91 (64%), Positives = 66/91 (72%)
Frame = +2
Query: 293 RPGPPNENLPTVKLXXXXXXXXXKSAITIQFFQKLFVTDYDPTIEDSYIQHTEVDGQWCI 472
RP + LP KL KS++TIQFFQK FV YDPTIED YIQH E+DG W I
Sbjct: 7 RPPEDDSKLPYYKLVVIGDGGVGKSSLTIQFFQKQFVDYYDPTIEDQYIQHCEIDGNWVI 66
Query: 473 LDVLDTAGQEEFSAMREQYMRKGDGFLIVFS 565
+DVLDTAGQEEFSAMREQY+R G GFL+VFS
Sbjct: 67 MDVLDTAGQEEFSAMREQYIRGGRGFLLVFS 97
Score = 29.1 bits (62), Expect = 4.4
Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = +1
Query: 574 TSRASXNXRH-FHTQILRVKDRDSYPMV 654
T R S H + Q+LRVKDR YP++
Sbjct: 99 TERKSFEEAHKLYNQVLRVKDRSEYPVL 126
>U80675-1|AAB38969.1| 211|Caenorhabditis elegans GTP binding
protein protein.
Length = 211
Score = 124 bits (299), Expect = 8e-29
Identities = 59/91 (64%), Positives = 66/91 (72%)
Frame = +2
Query: 293 RPGPPNENLPTVKLXXXXXXXXXKSAITIQFFQKLFVTDYDPTIEDSYIQHTEVDGQWCI 472
RP + LP KL KS++TIQFFQK FV YDPTIED YIQH E+DG W I
Sbjct: 7 RPPEDDSKLPYYKLVVIGDGGVGKSSLTIQFFQKQFVDYYDPTIEDQYIQHCEIDGNWVI 66
Query: 473 LDVLDTAGQEEFSAMREQYMRKGDGFLIVFS 565
+DVLDTAGQEEFSAMREQY+R G GFL+VFS
Sbjct: 67 MDVLDTAGQEEFSAMREQYIRGGRGFLLVFS 97
Score = 29.1 bits (62), Expect = 4.4
Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = +1
Query: 574 TSRASXNXRH-FHTQILRVKDRDSYPMV 654
T R S H + Q+LRVKDR YP++
Sbjct: 99 TERKSFEEAHKLYNQVLRVKDRSEYPVL 126
>Z68302-3|CAA92630.1| 184|Caenorhabditis elegans Hypothetical
protein ZK792.6 protein.
Length = 184
Score = 104 bits (249), Expect = 1e-22
Identities = 45/68 (66%), Positives = 57/68 (83%)
Frame = +2
Query: 362 KSAITIQFFQKLFVTDYDPTIEDSYIQHTEVDGQWCILDVLDTAGQEEFSAMREQYMRKG 541
KSA+TIQ Q FV +YDPTIEDSY + +DG+ C+LD+LDTAGQEE+SAMR+QYMR G
Sbjct: 16 KSALTIQLIQNHFVEEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTG 75
Query: 542 DGFLIVFS 565
+GFL+VF+
Sbjct: 76 EGFLLVFA 83
>M55535-1|AAA28103.1| 187|Caenorhabditis elegans ras protein
protein.
Length = 187
Score = 104 bits (249), Expect = 1e-22
Identities = 45/68 (66%), Positives = 57/68 (83%)
Frame = +2
Query: 362 KSAITIQFFQKLFVTDYDPTIEDSYIQHTEVDGQWCILDVLDTAGQEEFSAMREQYMRKG 541
KSA+TIQ Q FV +YDPTIEDSY + +DG+ C+LD+LDTAGQEE+SAMR+QYMR G
Sbjct: 19 KSALTIQLIQNHFVEEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTG 78
Query: 542 DGFLIVFS 565
+GFL+VF+
Sbjct: 79 EGFLLVFA 86
>U56933-1|AAB66712.1| 212|Caenorhabditis elegans GTP binding
protein protein.
Length = 212
Score = 102 bits (244), Expect = 4e-22
Identities = 47/68 (69%), Positives = 54/68 (79%)
Frame = +2
Query: 362 KSAITIQFFQKLFVTDYDPTIEDSYIQHTEVDGQWCILDVLDTAGQEEFSAMREQYMRKG 541
KSA+TIQF Q+ FV DYDPTIEDSY + VD C L++LDTAGQEEFS MREQY+R G
Sbjct: 30 KSALTIQFIQRYFVQDYDPTIEDSYTKQCFVDEDLCKLEILDTAGQEEFSTMREQYLRTG 89
Query: 542 DGFLIVFS 565
GFLIVF+
Sbjct: 90 SGFLIVFA 97
>U56930-1|AAB03320.1| 212|Caenorhabditis elegans R-ras1 homolog
protein.
Length = 212
Score = 102 bits (244), Expect = 4e-22
Identities = 47/68 (69%), Positives = 54/68 (79%)
Frame = +2
Query: 362 KSAITIQFFQKLFVTDYDPTIEDSYIQHTEVDGQWCILDVLDTAGQEEFSAMREQYMRKG 541
KSA+TIQF Q+ FV DYDPTIEDSY + VD C L++LDTAGQEEFS MREQY+R G
Sbjct: 30 KSALTIQFIQRYFVQDYDPTIEDSYTKQCFVDEDLCKLEILDTAGQEEFSTMREQYLRTG 89
Query: 542 DGFLIVFS 565
GFLIVF+
Sbjct: 90 SGFLIVFA 97
>CU457742-2|CAM36363.1| 168|Caenorhabditis elegans Hypothetical
protein C44C11.1b protein.
Length = 168
Score = 102 bits (244), Expect = 4e-22
Identities = 47/68 (69%), Positives = 54/68 (79%)
Frame = +2
Query: 362 KSAITIQFFQKLFVTDYDPTIEDSYIQHTEVDGQWCILDVLDTAGQEEFSAMREQYMRKG 541
KSA+TIQF Q+ FV DYDPTIEDSY + VD C L++LDTAGQEEFS MREQY+R G
Sbjct: 30 KSALTIQFIQRYFVQDYDPTIEDSYTKQCFVDEDLCKLEILDTAGQEEFSTMREQYLRTG 89
Query: 542 DGFLIVFS 565
GFLIVF+
Sbjct: 90 SGFLIVFA 97
>CU457742-1|CAM36362.1| 212|Caenorhabditis elegans Hypothetical
protein C44C11.1a protein.
Length = 212
Score = 102 bits (244), Expect = 4e-22
Identities = 47/68 (69%), Positives = 54/68 (79%)
Frame = +2
Query: 362 KSAITIQFFQKLFVTDYDPTIEDSYIQHTEVDGQWCILDVLDTAGQEEFSAMREQYMRKG 541
KSA+TIQF Q+ FV DYDPTIEDSY + VD C L++LDTAGQEEFS MREQY+R G
Sbjct: 30 KSALTIQFIQRYFVQDYDPTIEDSYTKQCFVDEDLCKLEILDTAGQEEFSTMREQYLRTG 89
Query: 542 DGFLIVFS 565
GFLIVF+
Sbjct: 90 SGFLIVFA 97
>Z54236-8|CAA90983.1| 188|Caenorhabditis elegans Hypothetical
protein C27B7.8 protein.
Length = 188
Score = 100 bits (240), Expect = 1e-21
Identities = 43/73 (58%), Positives = 58/73 (79%)
Frame = +2
Query: 362 KSAITIQFFQKLFVTDYDPTIEDSYIQHTEVDGQWCILDVLDTAGQEEFSAMREQYMRKG 541
KSA+T+QF Q +FV YDPTIEDSY + EVDGQ C+L++LDTAG E+F+AMR+ YM+ G
Sbjct: 16 KSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDGQQCMLEILDTAGTEQFTAMRDLYMKNG 75
Query: 542 DGFLIVFSXDGQA 580
GF++V+S Q+
Sbjct: 76 QGFVLVYSITAQS 88
>Z81039-10|CAB02777.2| 181|Caenorhabditis elegans Hypothetical
protein C25D7.7 protein.
Length = 181
Score = 89.4 bits (212), Expect = 3e-18
Identities = 38/72 (52%), Positives = 53/72 (73%)
Frame = +2
Query: 362 KSAITIQFFQKLFVTDYDPTIEDSYIQHTEVDGQWCILDVLDTAGQEEFSAMREQYMRKG 541
KSA+T+QF F+ YDPTIED Y + EVDGQ +L++LDTAG E+FS+MR+ Y++ G
Sbjct: 16 KSALTVQFVSSTFIEKYDPTIEDFYRKEIEVDGQPSVLEILDTAGTEQFSSMRDLYIKNG 75
Query: 542 DGFLIVFSXDGQ 577
GF++V+S Q
Sbjct: 76 QGFVVVYSITSQ 87
>AC024809-6|AAF59545.1| 213|Caenorhabditis elegans Ral (ras-related
gtpase) homologprotein 1 protein.
Length = 213
Score = 84.6 bits (200), Expect = 8e-17
Identities = 36/68 (52%), Positives = 51/68 (75%)
Frame = +2
Query: 362 KSAITIQFFQKLFVTDYDPTIEDSYIQHTEVDGQWCILDVLDTAGQEEFSAMREQYMRKG 541
KSA+T+QF FV +Y+PT DSY + +DG+ C +D+LDTAGQE++SA+R+ Y R G
Sbjct: 30 KSALTLQFMYDEFVEEYEPTKADSYRKKVVLDGEECSIDILDTAGQEDYSAIRDNYYRSG 89
Query: 542 DGFLIVFS 565
+GF+ VFS
Sbjct: 90 EGFICVFS 97
>Z73103-10|CAA97427.2| 205|Caenorhabditis elegans Hypothetical
protein C08F8.7 protein.
Length = 205
Score = 79.0 bits (186), Expect = 4e-15
Identities = 36/68 (52%), Positives = 50/68 (73%)
Frame = +2
Query: 362 KSAITIQFFQKLFVTDYDPTIEDSYIQHTEVDGQWCILDVLDTAGQEEFSAMREQYMRKG 541
KSA+T+Q+ Q +FV YD TIEDSY + ++VD + L++LDTAG E+F+ MRE Y R
Sbjct: 16 KSALTLQYVQGIFVHTYDATIEDSYRKLSKVDAENARLEILDTAGTEQFTGMRETYYRTA 75
Query: 542 DGFLIVFS 565
GF++VFS
Sbjct: 76 QGFVLVFS 83
>Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical
protein D1081.4 protein.
Length = 381
Score = 56.8 bits (131), Expect = 2e-08
Identities = 25/71 (35%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Frame = +2
Query: 362 KSAITIQFFQKLFVTDYDPTIED-SYIQHTEVDGQWCILDVLDTAGQEEFSAMREQYMRK 538
KSA+ QF FV DY PT+E+ ++I++ +G+ ++ ++D++G +F M+ Y+
Sbjct: 35 KSAMVSQFLWHKFVEDYRPTVEEFNWIEYEIEEGRVLMVQIIDSSGSRDFIGMKNLYIGT 94
Query: 539 GDGFLIVFSXD 571
D FL+VF+ D
Sbjct: 95 ADAFLVVFAAD 105
>Z22178-5|CAA80155.1| 207|Caenorhabditis elegans Hypothetical
protein F54C8.5 protein.
Length = 207
Score = 49.2 bits (112), Expect = 4e-06
Identities = 24/70 (34%), Positives = 40/70 (57%)
Frame = +2
Query: 362 KSAITIQFFQKLFVTDYDPTIEDSYIQHTEVDGQWCILDVLDTAGQEEFSAMREQYMRKG 541
KSA+ ++F Q +F Y+ TIED + +H + L V DTAGQ+E++
Sbjct: 26 KSALVLRFTQNIFPERYESTIEDQHSKHIAAFHRDYHLRVTDTAGQQEYTVFPRSCSLDI 85
Query: 542 DGFLIVFSXD 571
+GF++V++ D
Sbjct: 86 NGFILVYAID 95
>X68492-1|CAA48506.1| 191|Caenorhabditis elegans small ras-related
protein protein.
Length = 191
Score = 48.0 bits (109), Expect = 9e-06
Identities = 24/73 (32%), Positives = 40/73 (54%)
Frame = +2
Query: 362 KSAITIQFFQKLFVTDYDPTIEDSYIQHTEVDGQWCILDVLDTAGQEEFSAMREQYMRKG 541
K+ + I + F +Y PT+ D+Y + VDG+ L + DTAGQE++ +R +
Sbjct: 16 KTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGRPINLGLWDTAGQEDYDRLRPLSYPQT 75
Query: 542 DGFLIVFSXDGQA 580
D FL+ F+ + A
Sbjct: 76 DVFLVCFALNNPA 88
>L04287-1|AAA28141.1| 191|Caenorhabditis elegans rac1 protein
protein.
Length = 191
Score = 48.0 bits (109), Expect = 9e-06
Identities = 24/73 (32%), Positives = 40/73 (54%)
Frame = +2
Query: 362 KSAITIQFFQKLFVTDYDPTIEDSYIQHTEVDGQWCILDVLDTAGQEEFSAMREQYMRKG 541
K+ + I + F +Y PT+ D+Y + VDG+ L + DTAGQE++ +R +
Sbjct: 16 KTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGRPINLGLWDTAGQEDYDRLRPLSYPQT 75
Query: 542 DGFLIVFSXDGQA 580
D FL+ F+ + A
Sbjct: 76 DVFLVCFALNNPA 88
>L03711-1|AAA28140.1| 191|Caenorhabditis elegans rac1 protein
protein.
Length = 191
Score = 48.0 bits (109), Expect = 9e-06
Identities = 24/73 (32%), Positives = 40/73 (54%)
Frame = +2
Query: 362 KSAITIQFFQKLFVTDYDPTIEDSYIQHTEVDGQWCILDVLDTAGQEEFSAMREQYMRKG 541
K+ + I + F +Y PT+ D+Y + VDG+ L + DTAGQE++ +R +
Sbjct: 16 KTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGRPINLGLWDTAGQEDYDRLRPLSYPQT 75
Query: 542 DGFLIVFSXDGQA 580
D FL+ F+ + A
Sbjct: 76 DVFLVCFALNNPA 88
>AF226867-1|AAF33846.1| 191|Caenorhabditis elegans cell-corpse
engulfment proteinCED-10 protein.
Length = 191
Score = 48.0 bits (109), Expect = 9e-06
Identities = 24/73 (32%), Positives = 40/73 (54%)
Frame = +2
Query: 362 KSAITIQFFQKLFVTDYDPTIEDSYIQHTEVDGQWCILDVLDTAGQEEFSAMREQYMRKG 541
K+ + I + F +Y PT+ D+Y + VDG+ L + DTAGQE++ +R +
Sbjct: 16 KTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGRPINLGLWDTAGQEDYDRLRPLSYPQT 75
Query: 542 DGFLIVFSXDGQA 580
D FL+ F+ + A
Sbjct: 76 DVFLVCFALNNPA 88
>AF038608-16|AAC25821.1| 191|Caenorhabditis elegans Cell death
abnormality protein10, isoform b protein.
Length = 191
Score = 48.0 bits (109), Expect = 9e-06
Identities = 24/73 (32%), Positives = 40/73 (54%)
Frame = +2
Query: 362 KSAITIQFFQKLFVTDYDPTIEDSYIQHTEVDGQWCILDVLDTAGQEEFSAMREQYMRKG 541
K+ + I + F +Y PT+ D+Y + VDG+ L + DTAGQE++ +R +
Sbjct: 16 KTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGRPINLGLWDTAGQEDYDRLRPLSYPQT 75
Query: 542 DGFLIVFSXDGQA 580
D FL+ F+ + A
Sbjct: 76 DVFLVCFALNNPA 88
>U23452-10|AAK31543.1| 191|Caenorhabditis elegans Hypothetical
protein R07G3.1 protein.
Length = 191
Score = 47.6 bits (108), Expect = 1e-05
Identities = 24/83 (28%), Positives = 41/83 (49%)
Frame = +2
Query: 317 LPTVKLXXXXXXXXXKSAITIQFFQKLFVTDYDPTIEDSYIQHTEVDGQWCILDVLDTAG 496
+ T+K K+ + I + F ++Y PT+ D+Y + G+ L + DTAG
Sbjct: 1 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAG 60
Query: 497 QEEFSAMREQYMRKGDGFLIVFS 565
QE++ +R + D FL+ FS
Sbjct: 61 QEDYDRLRPLSYPQTDVFLVCFS 83
>S82771-1|AAC05600.1| 191|Caenorhabditis elegans cdc42 homolog
protein.
Length = 191
Score = 47.6 bits (108), Expect = 1e-05
Identities = 24/83 (28%), Positives = 41/83 (49%)
Frame = +2
Query: 317 LPTVKLXXXXXXXXXKSAITIQFFQKLFVTDYDPTIEDSYIQHTEVDGQWCILDVLDTAG 496
+ T+K K+ + I + F ++Y PT+ D+Y + G+ L + DTAG
Sbjct: 1 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTAMIGGEPYTLGLFDTAG 60
Query: 497 QEEFSAMREQYMRKGDGFLIVFS 565
QE++ +R + D FL+ FS
Sbjct: 61 QEDYDRLRPLSYPQTDVFLVCFS 83
>L36965-1|AAC37216.1| 192|Caenorhabditis elegans guanine nucleotide
regulatory proteinprotein.
Length = 192
Score = 47.2 bits (107), Expect = 2e-05
Identities = 25/70 (35%), Positives = 38/70 (54%)
Frame = +2
Query: 362 KSAITIQFFQKLFVTDYDPTIEDSYIQHTEVDGQWCILDVLDTAGQEEFSAMREQYMRKG 541
K+ + I F + F Y PT+ ++Y+ EVDG+ L + DTAGQE++ +R
Sbjct: 18 KTCLLIVFSKDQFPDVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDT 77
Query: 542 DGFLIVFSXD 571
D L+ FS D
Sbjct: 78 DVILMCFSID 87
>AL132952-3|CAB63379.1| 192|Caenorhabditis elegans Hypothetical
protein Y51H4A.3 protein.
Length = 192
Score = 47.2 bits (107), Expect = 2e-05
Identities = 25/70 (35%), Positives = 38/70 (54%)
Frame = +2
Query: 362 KSAITIQFFQKLFVTDYDPTIEDSYIQHTEVDGQWCILDVLDTAGQEEFSAMREQYMRKG 541
K+ + I F + F Y PT+ ++Y+ EVDG+ L + DTAGQE++ +R
Sbjct: 18 KTCLLIVFSKDQFPDVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDT 77
Query: 542 DGFLIVFSXD 571
D L+ FS D
Sbjct: 78 DVILMCFSID 87
>L10078-1|AAA51433.1| 188|Caenorhabditis elegans guanine nucleotide
regulatory proteinprotein.
Length = 188
Score = 46.0 bits (104), Expect = 4e-05
Identities = 22/68 (32%), Positives = 37/68 (54%)
Frame = +2
Query: 362 KSAITIQFFQKLFVTDYDPTIEDSYIQHTEVDGQWCILDVLDTAGQEEFSAMREQYMRKG 541
K+ + I + F ++Y PT+ D+Y + G+ L + DTAGQE++ +R +
Sbjct: 13 KTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQT 72
Query: 542 DGFLIVFS 565
D FL+ FS
Sbjct: 73 DVFLVCFS 80
>U64600-3|AAK39204.1| 656|Caenorhabditis elegans Temporarily
assigned gene nameprotein 312 protein.
Length = 656
Score = 45.6 bits (103), Expect = 5e-05
Identities = 21/68 (30%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Frame = +2
Query: 362 KSAITIQFFQKLFVTDYDPTIE-DSYIQHTEVDGQWCILDVLDTAGQEEFSAMREQYMRK 538
KS+ ++ ++ F T+ D +++ VDG+ L + DTAGQE F ++ + Y R+
Sbjct: 474 KSSFVMRVIRRQFTNQLPSTLGVDFHVKTVNVDGRNVALQLWDTAGQERFRSLCKSYFRR 533
Query: 539 GDGFLIVF 562
DG ++V+
Sbjct: 534 ADGAILVY 541
>Z79601-4|CAB01884.1| 210|Caenorhabditis elegans Hypothetical
protein K09A9.2 protein.
Length = 210
Score = 45.2 bits (102), Expect = 6e-05
Identities = 27/68 (39%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Frame = +2
Query: 362 KSAITIQFFQKLFVTDYDPTIEDSY-IQHTEVDGQWCILDVLDTAGQEEFSAMREQYMRK 538
KS + QF +K F+ D TI + + EV GQ L + DTAGQE F A+ Y R
Sbjct: 24 KSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQERFRAVTRSYYRG 83
Query: 539 GDGFLIVF 562
G L+V+
Sbjct: 84 AAGALMVY 91
>AF101310-3|AAC69218.1| 205|Caenorhabditis elegans Rab family
protein 1 protein.
Length = 205
Score = 45.2 bits (102), Expect = 6e-05
Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Frame = +2
Query: 362 KSAITIQFFQKLFVTDYDPTIE-DSYIQHTEVDGQWCILDVLDTAGQEEFSAMREQYMRK 538
KS + ++F + Y TI D I+ E+DG+ L + DTAGQE F + Y R
Sbjct: 24 KSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRG 83
Query: 539 GDGFLIVFSXDGQ 577
G ++V+ Q
Sbjct: 84 AHGIIVVYDITDQ 96
>AC024853-3|ABP57809.1| 244|Caenorhabditis elegans Hypothetical
protein Y71F9AR.2 protein.
Length = 244
Score = 44.8 bits (101), Expect = 8e-05
Identities = 22/72 (30%), Positives = 40/72 (55%)
Frame = +2
Query: 362 KSAITIQFFQKLFVTDYDPTIEDSYIQHTEVDGQWCILDVLDTAGQEEFSAMREQYMRKG 541
KSAI +++ K F+ +YD T+ED+Y + V GQ ++ ++DT MR ++
Sbjct: 22 KSAIAVKYITKRFIGEYDSTLEDNYCRQETVGGQSLMVWMMDTVENATKDEMR--WIAWA 79
Query: 542 DGFLIVFSXDGQ 577
D +++V+ Q
Sbjct: 80 DVYVVVYDVTSQ 91
>Z78417-3|CAB01691.1| 195|Caenorhabditis elegans Hypothetical
protein C35C5.4 protein.
Length = 195
Score = 44.4 bits (100), Expect = 1e-04
Identities = 22/68 (32%), Positives = 35/68 (51%)
Frame = +2
Query: 362 KSAITIQFFQKLFVTDYDPTIEDSYIQHTEVDGQWCILDVLDTAGQEEFSAMREQYMRKG 541
K+ + I + F Y PT+ D+Y +DG L + DTAGQE++ +R +
Sbjct: 20 KTCMLISYTTDSFPVQYVPTVFDNYSAQMSLDGNVVNLGLWDTAGQEDYDRLRPLSYPQT 79
Query: 542 DGFLIVFS 565
D F++ FS
Sbjct: 80 DVFILCFS 87
>U82288-1|AAC47729.1| 195|Caenorhabditis elegans Rac-like GTPase
protein.
Length = 195
Score = 44.4 bits (100), Expect = 1e-04
Identities = 22/68 (32%), Positives = 35/68 (51%)
Frame = +2
Query: 362 KSAITIQFFQKLFVTDYDPTIEDSYIQHTEVDGQWCILDVLDTAGQEEFSAMREQYMRKG 541
K+ + I + F Y PT+ D+Y +DG L + DTAGQE++ +R +
Sbjct: 20 KTCMLISYTTDSFPVQYVPTVFDNYSAQMSLDGNVVNLGLWDTAGQEDYDRLRPLSYPQT 79
Query: 542 DGFLIVFS 565
D F++ FS
Sbjct: 80 DVFILCFS 87
>AF038608-15|AAC25820.1| 129|Caenorhabditis elegans Cell death
abnormality protein10, isoform a protein.
Length = 129
Score = 44.4 bits (100), Expect = 1e-04
Identities = 20/58 (34%), Positives = 35/58 (60%)
Frame = +2
Query: 362 KSAITIQFFQKLFVTDYDPTIEDSYIQHTEVDGQWCILDVLDTAGQEEFSAMREQYMR 535
K+ + I + F +Y PT+ D+Y + VDG+ L + DTAGQE++ +RE+ ++
Sbjct: 16 KTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGRPINLGLWDTAGQEDYDRLRERRLQ 73
>U97191-2|AAB52431.1| 214|Caenorhabditis elegans Uncoordinated
protein 108 protein.
Length = 214
Score = 43.6 bits (98), Expect = 2e-04
Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Frame = +2
Query: 362 KSAITIQFFQKLFVTDYDPTIEDSY-IQHTEVDGQWCILDVLDTAGQEEFSAMREQYMRK 538
KS + +QF K F +D TI + + +DG+ L + DTAGQE F ++ Y R
Sbjct: 19 KSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGKQIKLQIWDTAGQESFRSITRSYYRG 78
Query: 539 GDGFLIVF 562
G L+V+
Sbjct: 79 AAGALLVY 86
>AL117202-19|CAB57899.1| 209|Caenorhabditis elegans Hypothetical
protein Y47D3A.25 protein.
Length = 209
Score = 42.7 bits (96), Expect = 3e-04
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Frame = +2
Query: 362 KSAITIQFFQKLFVTDYDPTIE-DSYIQHTEVDGQWCILDVLDTAGQEEFSAMREQYMRK 538
KS++ ++F F +Y TI D I+ +++GQ L + DTAGQE F + Y R
Sbjct: 23 KSSLLLRFADNTFSENYITTIGVDFKIRTMDINGQRVKLQIWDTAGQERFRTITSTYYRG 82
Query: 539 GDGFLIVF 562
G ++V+
Sbjct: 83 THGVVVVY 90
>Z82276-7|CAB05247.2| 195|Caenorhabditis elegans Hypothetical
protein K03D3.10 protein.
Length = 195
Score = 42.3 bits (95), Expect = 4e-04
Identities = 21/73 (28%), Positives = 38/73 (52%)
Frame = +2
Query: 362 KSAITIQFFQKLFVTDYDPTIEDSYIQHTEVDGQWCILDVLDTAGQEEFSAMREQYMRKG 541
K+ + + + F +Y T+ D+Y + VDG+ L + DTAGQ+++ R +
Sbjct: 16 KTCLLLSYTTNAFPGEYILTVFDTYSTNVMVDGRPINLSLWDTAGQDDYDQFRHLSFPQT 75
Query: 542 DGFLIVFSXDGQA 580
D FL+ F+ + A
Sbjct: 76 DVFLVCFALNNPA 88
>U55018-1|AAB40386.1| 195|Caenorhabditis elegans CeRac2 protein.
Length = 195
Score = 42.3 bits (95), Expect = 4e-04
Identities = 21/73 (28%), Positives = 38/73 (52%)
Frame = +2
Query: 362 KSAITIQFFQKLFVTDYDPTIEDSYIQHTEVDGQWCILDVLDTAGQEEFSAMREQYMRKG 541
K+ + + + F +Y T+ D+Y + VDG+ L + DTAGQ+++ R +
Sbjct: 16 KTCLLLSYTTNAFPGEYILTVFDTYSTNVMVDGRPINLSLWDTAGQDDYDQFRHLSFPQT 75
Query: 542 DGFLIVFSXDGQA 580
D FL+ F+ + A
Sbjct: 76 DVFLVCFALNNPA 88
>Z66499-1|CAA91296.1| 207|Caenorhabditis elegans Hypothetical
protein T01B7.3 protein.
Length = 207
Score = 41.1 bits (92), Expect = 0.001
Identities = 24/69 (34%), Positives = 41/69 (59%), Gaps = 2/69 (2%)
Frame = +2
Query: 362 KSAITIQFFQKLFVTDYDPTIEDSYIQHTEVDGQWCILD--VLDTAGQEEFSAMREQYMR 535
KS++ ++F + F + TI+ S+ Q+ V+ + C D + DTAGQE++ A+ Y R
Sbjct: 25 KSSLVLRFVENKFSCKHLSTIQASF-QNKTVNVEDCQADLHIWDTAGQEKYHALGPIYYR 83
Query: 536 KGDGFLIVF 562
+G L+VF
Sbjct: 84 GSNGVLLVF 92
>AC024875-5|AAM44401.1| 203|Caenorhabditis elegans Rab family
protein 18, isoform b protein.
Length = 203
Score = 41.1 bits (92), Expect = 0.001
Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 1/83 (1%)
Frame = +2
Query: 317 LPTVKLXXXXXXXXXKSAITIQFFQKLFVTDYDPTIE-DSYIQHTEVDGQWCILDVLDTA 493
L T+K+ KS++ ++F +F + TI D + +DG L + DTA
Sbjct: 9 LTTLKILIIGESGVGKSSLMLRFVDDVFDPEQAATIGVDFRVTSMAIDGNRVKLAIWDTA 68
Query: 494 GQEEFSAMREQYMRKGDGFLIVF 562
GQE F + Y R G + V+
Sbjct: 69 GQERFRTLTPSYYRGAQGVICVY 91
>Z81516-4|CAB04205.1| 208|Caenorhabditis elegans Hypothetical
protein F26H9.6 protein.
Length = 208
Score = 40.7 bits (91), Expect = 0.001
Identities = 25/96 (26%), Positives = 43/96 (44%), Gaps = 1/96 (1%)
Frame = +2
Query: 293 RPGPPNENLPTVKLXXXXXXXXXKSAITIQFFQKLFVTDYDPTIEDSYIQHTE-VDGQWC 469
RPG PN KL KS++ ++F + F + TI +++ T +D
Sbjct: 10 RPGGPNRTCQ-FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDATI 68
Query: 470 ILDVLDTAGQEEFSAMREQYMRKGDGFLIVFSXDGQ 577
++ DTAGQE + ++ Y R ++V+ Q
Sbjct: 69 KFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQ 104
>U68256-1|AAB16971.1| 123|Caenorhabditis elegans rab8-like protein.
Length = 123
Score = 38.7 bits (86), Expect = 0.005
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = +2
Query: 362 KSAITIQFFQKLFVTDYDPTIE-DSYIQHTEVDGQWCILDVLDTAGQEEFSAMREQYMRK 538
K+ + +F F + TI D I+ E+DG+ L + DTAGQE F + Y R
Sbjct: 21 KTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRG 80
Query: 539 GDGFLIVF 562
G ++V+
Sbjct: 81 AMGIILVY 88
>AF106592-3|AAK21367.2| 211|Caenorhabditis elegans Rab family
protein 8 protein.
Length = 211
Score = 38.7 bits (86), Expect = 0.005
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = +2
Query: 362 KSAITIQFFQKLFVTDYDPTIE-DSYIQHTEVDGQWCILDVLDTAGQEEFSAMREQYMRK 538
K+ + +F F + TI D I+ E+DG+ L + DTAGQE F + Y R
Sbjct: 21 KTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRG 80
Query: 539 GDGFLIVF 562
G ++V+
Sbjct: 81 AMGIILVY 88
>AB112929-1|BAD07034.1| 211|Caenorhabditis elegans Rab8 protein.
Length = 211
Score = 38.7 bits (86), Expect = 0.005
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = +2
Query: 362 KSAITIQFFQKLFVTDYDPTIE-DSYIQHTEVDGQWCILDVLDTAGQEEFSAMREQYMRK 538
K+ + +F F + TI D I+ E+DG+ L + DTAGQE F + Y R
Sbjct: 21 KTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRG 80
Query: 539 GDGFLIVF 562
G ++V+
Sbjct: 81 AMGIILVY 88
>U80033-5|AAC48200.1| 201|Caenorhabditis elegans Rab family protein
10 protein.
Length = 201
Score = 38.3 bits (85), Expect = 0.007
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = +2
Query: 362 KSAITIQFFQKLFVTDYDPTIE-DSYIQHTEVDGQWCILDVLDTAGQEEFSAMREQYMRK 538
K+ I +F F T + TI D I+ E+ G+ L + DTAGQE F + Y R
Sbjct: 22 KTCILYRFSDDAFNTTFISTIGIDFKIKTIELKGKKIKLQIWDTAGQERFHTITTSYYRG 81
Query: 539 GDGFLIVF 562
G ++V+
Sbjct: 82 AMGIMLVY 89
>U68257-1|AAB16972.1| 124|Caenorhabditis elegans rab10-like
protein.
Length = 124
Score = 38.3 bits (85), Expect = 0.007
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = +2
Query: 362 KSAITIQFFQKLFVTDYDPTIE-DSYIQHTEVDGQWCILDVLDTAGQEEFSAMREQYMRK 538
K+ I +F F T + TI D I+ E+ G+ L + DTAGQE F + Y R
Sbjct: 22 KTCILYRFSDDAFNTTFISTIGIDFKIKTIELKGKKIKLQIWDTAGQERFHTITTSYYRG 81
Query: 539 GDGFLIVF 562
G ++V+
Sbjct: 82 AMGIMLVY 89
>AL021475-2|CAA16313.1| 187|Caenorhabditis elegans Hypothetical
protein Y32F6B.3 protein.
Length = 187
Score = 37.9 bits (84), Expect = 0.010
Identities = 19/80 (23%), Positives = 40/80 (50%)
Frame = +2
Query: 326 VKLXXXXXXXXXKSAITIQFFQKLFVTDYDPTIEDSYIQHTEVDGQWCILDVLDTAGQEE 505
+KL K+++ + + +K F+ +Y T+ D++ +D + +++ DTAGQ
Sbjct: 5 LKLVVVGDTYTGKTSLLVAYTKKQFLDNYTTTVFDNWAVSVHIDNKNYAVNLFDTAGQGN 64
Query: 506 FSAMREQYMRKGDGFLIVFS 565
+ +R + FL+ FS
Sbjct: 65 YEQIRCLSYPHANVFLVCFS 84
>AL031254-1|CAA20282.1| 395|Caenorhabditis elegans Hypothetical
protein 4R79.2 protein.
Length = 395
Score = 37.1 bits (82), Expect = 0.017
Identities = 14/30 (46%), Positives = 22/30 (73%)
Frame = +2
Query: 473 LDVLDTAGQEEFSAMREQYMRKGDGFLIVF 562
+ + DTAGQE F ++ +QY RK DG +++F
Sbjct: 254 MQLWDTAGQERFRSITKQYFRKADGVVLMF 283
>Z66516-6|CAA91357.1| 209|Caenorhabditis elegans Hypothetical
protein W03C9.3 protein.
Length = 209
Score = 36.7 bits (81), Expect = 0.022
Identities = 19/74 (25%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Frame = +2
Query: 362 KSAITIQFFQKLFVTDYDPTIEDSYI-QHTEVDGQWCILDVLDTAGQEEFSAMREQYMRK 538
K+++ Q+ + F Y TI ++ + +D + L + DTAGQE F ++ + R
Sbjct: 22 KTSLMNQYVNRRFSNQYKATIGADFLTRDVNIDDRTVTLQIWDTAGQERFQSLGVAFYRG 81
Query: 539 GDGFLIVFSXDGQA 580
D ++ F A
Sbjct: 82 ADCCVLAFDVTNAA 95
>U97592-7|AAB52874.2| 332|Caenorhabditis elegans Sperm-specific
family, class rprotein 2 protein.
Length = 332
Score = 36.7 bits (81), Expect = 0.022
Identities = 23/70 (32%), Positives = 33/70 (47%)
Frame = +2
Query: 362 KSAITIQFFQKLFVTDYDPTIEDSYIQHTEVDGQWCILDVLDTAGQEEFSAMREQYMRKG 541
K+ I ++ F + Y TIED + + + G LD+LDT F MR +
Sbjct: 30 KTNIIRRYLYNEFSSKYKETIEDLHSREFRIQGVPLPLDILDT--NFNFPDMRRLSIASA 87
Query: 542 DGFLIVFSXD 571
FL+VFS D
Sbjct: 88 SAFLLVFSVD 97
>AC024859-6|AAK29982.1| 195|Caenorhabditis elegans Hypothetical
protein Y71H2AM.12 protein.
Length = 195
Score = 36.7 bits (81), Expect = 0.022
Identities = 28/86 (32%), Positives = 39/86 (45%), Gaps = 3/86 (3%)
Frame = +2
Query: 311 ENLPTVKLXXXXXXXXXKSAITIQFFQKLFVTDYDPTIEDSYIQHTEV---DGQWCILDV 481
+ + TVK+ K+A+ F F TD TI + +H V DGQ L +
Sbjct: 2 DTIKTVKVVVVGESGAGKTALLTCFLDNTFETDPLTTIGIDF-KHKIVQLNDGQSIRLQL 60
Query: 482 LDTAGQEEFSAMREQYMRKGDGFLIV 559
DTAGQE F + Y+R L+V
Sbjct: 61 WDTAGQERFRQLAPAYIRSARVALLV 86
>AL132865-6|CAB60605.1| 210|Caenorhabditis elegans Hypothetical
protein Y62E10A.9 protein.
Length = 210
Score = 36.3 bits (80), Expect = 0.029
Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Frame = +2
Query: 362 KSAITIQFFQKLFVTDYDPTIEDSYIQHT-EVDGQWCILDVLDTAGQEEFSAMREQYMRK 538
K+ + +F FV TI + T VDG+ L + DT GQE F + + Y R
Sbjct: 23 KTCVVQRFRNGTFVDRQGTTIGVDFTMKTLVVDGKRVKLQIWDTGGQERFRTITQSYYRS 82
Query: 539 GDGFLIVF 562
+G ++ +
Sbjct: 83 ANGIVLCY 90
>U39996-4|AAA81090.2| 266|Caenorhabditis elegans Hypothetical
protein C56E6.2 protein.
Length = 266
Score = 35.9 bits (79), Expect = 0.039
Identities = 17/30 (56%), Positives = 18/30 (60%)
Frame = +2
Query: 473 LDVLDTAGQEEFSAMREQYMRKGDGFLIVF 562
L V DTAGQE F M YMR D LIV+
Sbjct: 107 LQVWDTAGQERFRCMVPMYMRNADAALIVY 136
>AL032621-1|CAA21489.1| 216|Caenorhabditis elegans Hypothetical
protein Y45F3A.2 protein.
Length = 216
Score = 35.9 bits (79), Expect = 0.039
Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Frame = +2
Query: 362 KSAITIQFFQKLFVTDYDPTIE-DSYIQHTEVDGQWCILDVLDTAGQEEFSAMREQYMRK 538
K+ + +F Q +F TI D I+ +V L + DTAGQE F ++ + Y R
Sbjct: 20 KTCLVRKFTQGIFPPGQSATIGVDFMIKTVKVGNDKIKLQIWDTAGQERFRSITQSYYRS 79
Query: 539 GDGFLIVFSXDGQ 577
++V+ Q
Sbjct: 80 AHAIVLVYDVSCQ 92
>Z92830-4|CAB07357.1| 203|Caenorhabditis elegans Hypothetical
protein F11A5.4 protein.
Length = 203
Score = 35.5 bits (78), Expect = 0.051
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Frame = +2
Query: 362 KSAITIQFFQKLFVTDYDPTIEDSY-IQHTEVDGQWCILDVLDTAGQEEFSAMREQYMRK 538
KS + ++F K F + + T+ + ++ E+D + L V DT GQE F ++ Y R
Sbjct: 19 KSNLLLRFIGKPFDSIHPSTLGIEFGFRNLEIDRKKVKLHVWDTCGQERFRSLVGSYYRH 78
Query: 539 GDGFLIVF 562
G L+V+
Sbjct: 79 AIGALLVY 86
>Z72506-10|CAA96623.1| 364|Caenorhabditis elegans Hypothetical
protein F52A8.6a protein.
Length = 364
Score = 35.5 bits (78), Expect = 0.051
Identities = 20/55 (36%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Frame = +2
Query: 410 YDPTIEDSY-IQHTEVDGQWCILDVLDTAGQEEFS--AMREQYMRKGDGFLIVFS 565
Y+PTIED+Y + E D IL + DTAG + +++ Y++ D F++V+S
Sbjct: 200 YEPTIEDTYQVLLEEPDKAREILILHDTAGVSNYGPIELKKAYVQAADAFVLVYS 254
>Z72506-8|CAC42277.1| 199|Caenorhabditis elegans Hypothetical
protein F52A8.6c protein.
Length = 199
Score = 35.5 bits (78), Expect = 0.051
Identities = 20/55 (36%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Frame = +2
Query: 410 YDPTIEDSY-IQHTEVDGQWCILDVLDTAGQEEFS--AMREQYMRKGDGFLIVFS 565
Y+PTIED+Y + E D IL + DTAG + +++ Y++ D F++V+S
Sbjct: 35 YEPTIEDTYQVLLEEPDKAREILILHDTAGVSNYGPIELKKAYVQAADAFVLVYS 89
>Z71263-8|CAA95826.1| 364|Caenorhabditis elegans Hypothetical
protein F52A8.6a protein.
Length = 364
Score = 35.5 bits (78), Expect = 0.051
Identities = 20/55 (36%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Frame = +2
Query: 410 YDPTIEDSY-IQHTEVDGQWCILDVLDTAGQEEFS--AMREQYMRKGDGFLIVFS 565
Y+PTIED+Y + E D IL + DTAG + +++ Y++ D F++V+S
Sbjct: 200 YEPTIEDTYQVLLEEPDKAREILILHDTAGVSNYGPIELKKAYVQAADAFVLVYS 254
>Z11505-4|CAA77590.1| 205|Caenorhabditis elegans Hypothetical
protein F59B2.7 protein.
Length = 205
Score = 35.5 bits (78), Expect = 0.051
Identities = 23/86 (26%), Positives = 38/86 (44%), Gaps = 1/86 (1%)
Frame = +2
Query: 308 NENLPTVKLXXXXXXXXXKSAITIQFFQKLFVTDYDPTIEDSYIQHTE-VDGQWCILDVL 484
N L KL K++I +F F Y TI ++ T ++ + L +
Sbjct: 6 NNALKKFKLVFLGEQSVGKTSIITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLW 65
Query: 485 DTAGQEEFSAMREQYMRKGDGFLIVF 562
DTAGQE F ++ Y+R ++V+
Sbjct: 66 DTAGQERFRSLIPSYIRDSSVAVVVY 91
>U68266-1|AAB16981.1| 219|Caenorhabditis elegans RAB-3 protein.
Length = 219
Score = 35.5 bits (78), Expect = 0.051
Identities = 22/91 (24%), Positives = 41/91 (45%), Gaps = 2/91 (2%)
Frame = +2
Query: 296 PGPPNENLPTV-KLXXXXXXXXXKSAITIQFFQKLFVTDYDPTIEDSYIQHTEVDGQWCI 472
PG P++N + KL K++ ++ F + + T+ + T G +
Sbjct: 12 PGQPDQNFDYMFKLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTVFRGDKRV 71
Query: 473 -LDVLDTAGQEEFSAMREQYMRKGDGFLIVF 562
L + DTAGQE + + Y R GF++++
Sbjct: 72 KLQIWDTAGQERYRTITTAYYRGAMGFILMY 102
>U68265-1|AAB16980.1| 219|Caenorhabditis elegans RAB-3 protein.
Length = 219
Score = 35.5 bits (78), Expect = 0.051
Identities = 22/91 (24%), Positives = 41/91 (45%), Gaps = 2/91 (2%)
Frame = +2
Query: 296 PGPPNENLPTV-KLXXXXXXXXXKSAITIQFFQKLFVTDYDPTIEDSYIQHTEVDGQWCI 472
PG P++N + KL K++ ++ F + + T+ + T G +
Sbjct: 12 PGQPDQNFDYMFKLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTVFRGDKRV 71
Query: 473 -LDVLDTAGQEEFSAMREQYMRKGDGFLIVF 562
L + DTAGQE + + Y R GF++++
Sbjct: 72 KLQIWDTAGQERYRTITTAYYRGAMGFILMY 102
>U28944-15|AAK68196.1| 219|Caenorhabditis elegans Rab family
protein 3, isoform b protein.
Length = 219
Score = 35.5 bits (78), Expect = 0.051
Identities = 22/91 (24%), Positives = 41/91 (45%), Gaps = 2/91 (2%)
Frame = +2
Query: 296 PGPPNENLPTV-KLXXXXXXXXXKSAITIQFFQKLFVTDYDPTIEDSYIQHTEVDGQWCI 472
PG P++N + KL K++ ++ F + + T+ + T G +
Sbjct: 12 PGQPDQNFDYMFKLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTVFRGDKRV 71
Query: 473 -LDVLDTAGQEEFSAMREQYMRKGDGFLIVF 562
L + DTAGQE + + Y R GF++++
Sbjct: 72 KLQIWDTAGQERYRTITTAYYRGAMGFILMY 102
>U28944-14|AAK68195.1| 233|Caenorhabditis elegans Rab family
protein 3, isoform a protein.
Length = 233
Score = 35.5 bits (78), Expect = 0.051
Identities = 22/91 (24%), Positives = 41/91 (45%), Gaps = 2/91 (2%)
Frame = +2
Query: 296 PGPPNENLPTV-KLXXXXXXXXXKSAITIQFFQKLFVTDYDPTIEDSYIQHTEVDGQWCI 472
PG P++N + KL K++ ++ F + + T+ + T G +
Sbjct: 26 PGQPDQNFDYMFKLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTVFRGDKRV 85
Query: 473 -LDVLDTAGQEEFSAMREQYMRKGDGFLIVF 562
L + DTAGQE + + Y R GF++++
Sbjct: 86 KLQIWDTAGQERYRTITTAYYRGAMGFILMY 116
>AB112928-1|BAD07033.1| 219|Caenorhabditis elegans Rab3 protein.
Length = 219
Score = 35.5 bits (78), Expect = 0.051
Identities = 22/91 (24%), Positives = 41/91 (45%), Gaps = 2/91 (2%)
Frame = +2
Query: 296 PGPPNENLPTV-KLXXXXXXXXXKSAITIQFFQKLFVTDYDPTIEDSYIQHTEVDGQWCI 472
PG P++N + KL K++ ++ F + + T+ + T G +
Sbjct: 12 PGQPDQNFDYMFKLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTVFRGDKRV 71
Query: 473 -LDVLDTAGQEEFSAMREQYMRKGDGFLIVF 562
L + DTAGQE + + Y R GF++++
Sbjct: 72 KLQIWDTAGQERYRTITTAYYRGAMGFILMY 102
>AL110500-4|CAB54484.1| 215|Caenorhabditis elegans Hypothetical
protein Y87G2A.4 protein.
Length = 215
Score = 35.1 bits (77), Expect = 0.067
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +2
Query: 458 GQWCILDVLDTAGQEEFSAMREQYMRKGDGFLIVF 562
GQ +L + DTAGQE F ++ + R GF+++F
Sbjct: 62 GQRVLLQLWDTAGQERFRSLTTAFFRDAMGFILIF 96
>AB112930-1|BAD07035.1| 215|Caenorhabditis elegans Rab27 protein.
Length = 215
Score = 35.1 bits (77), Expect = 0.067
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +2
Query: 458 GQWCILDVLDTAGQEEFSAMREQYMRKGDGFLIVF 562
GQ +L + DTAGQE F ++ + R GF+++F
Sbjct: 62 GQRVLLQLWDTAGQERFRSLTTAFFRDAMGFILIF 96
>Z47808-1|CAA87774.2| 229|Caenorhabditis elegans Hypothetical
protein D2013.1 protein.
Length = 229
Score = 34.3 bits (75), Expect = 0.12
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Frame = +2
Query: 362 KSAITIQFFQKLFVTDYDPTIE-DSYIQHTEV-DGQWCILDVLDTAGQEEFSAMREQYMR 535
KS++ F + DPT+ D Y + E+ G L + DTAGQE+F ++ + Y R
Sbjct: 30 KSSLLRYFTEGKMAEISDPTVGVDFYARMIELRPGYRVKLQLWDTAGQEKFRSITKSYYR 89
Query: 536 KGDGFLIVF 562
G L ++
Sbjct: 90 NSVGVLAIY 98
>AC024875-6|AAK29988.3| 193|Caenorhabditis elegans Rab family
protein 18, isoform a protein.
Length = 193
Score = 33.9 bits (74), Expect = 0.16
Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Frame = +2
Query: 377 IQFFQKLFVTDYDPTIE-DSYIQHTEVDGQWCILDVLDTAGQEEFSAMREQYMRKGDGFL 553
++F +F + TI D + +DG L + DTAGQE F + Y R G +
Sbjct: 2 LRFVDDVFDPEQAATIGVDFRVTSMAIDGNRVKLAIWDTAGQERFRTLTPSYYRGAQGVI 61
Query: 554 IVF 562
V+
Sbjct: 62 CVY 64
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 33.1 bits (72), Expect = 0.27
Identities = 19/57 (33%), Positives = 19/57 (33%), Gaps = 3/57 (5%)
Frame = +3
Query: 723 PXAXPPXT*RPXPXDPPFXXXX---AXPXXGPXHPXPPXXXGTXXPPNPXSGXXXPP 884
P PP T P P PP P P PP G PP P G PP
Sbjct: 716 PPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 772
Score = 31.5 bits (68), Expect = 0.83
Identities = 17/46 (36%), Positives = 17/46 (36%)
Frame = +3
Query: 723 PXAXPPXT*RPXPXDPPFXXXXAXPXXGPXHPXPPXXXGTXXPPNP 860
P PP T P P PP P G P PP G PP P
Sbjct: 732 PGGLPPITGGPPPPPPP---GGLPPISGGPPPPPPPPGGCPPPPPP 774
Score = 31.5 bits (68), Expect = 0.83
Identities = 21/76 (27%), Positives = 23/76 (30%)
Frame = +2
Query: 656 GXAPXXTXCTPPXCXRPPXXXPPXRXTPPYLKTXXXGPXVQXXXRXPXXWSGSSXTPPXX 835
G P T PP PP PP PP G P + G PP
Sbjct: 733 GGLPPITGGPPPP--PPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 790
Query: 836 GDXXPPKPXFXEXXPP 883
G P P + PP
Sbjct: 791 GMFAPMAPVIPDYLPP 806
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 33.1 bits (72), Expect = 0.27
Identities = 19/57 (33%), Positives = 19/57 (33%), Gaps = 3/57 (5%)
Frame = +3
Query: 723 PXAXPPXT*RPXPXDPPFXXXX---AXPXXGPXHPXPPXXXGTXXPPNPXSGXXXPP 884
P PP T P P PP P P PP G PP P G PP
Sbjct: 716 PPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 772
Score = 31.5 bits (68), Expect = 0.83
Identities = 17/46 (36%), Positives = 17/46 (36%)
Frame = +3
Query: 723 PXAXPPXT*RPXPXDPPFXXXXAXPXXGPXHPXPPXXXGTXXPPNP 860
P PP T P P PP P G P PP G PP P
Sbjct: 732 PGGLPPITGGPPPPPPP---GGLPPISGGPPPPPPPPGGCPPPPPP 774
Score = 31.5 bits (68), Expect = 0.83
Identities = 21/76 (27%), Positives = 23/76 (30%)
Frame = +2
Query: 656 GXAPXXTXCTPPXCXRPPXXXPPXRXTPPYLKTXXXGPXVQXXXRXPXXWSGSSXTPPXX 835
G P T PP PP PP PP G P + G PP
Sbjct: 733 GGLPPITGGPPPP--PPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 790
Query: 836 GDXXPPKPXFXEXXPP 883
G P P + PP
Sbjct: 791 GMFAPMAPVIPDYLPP 806
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 33.1 bits (72), Expect = 0.27
Identities = 19/57 (33%), Positives = 19/57 (33%), Gaps = 3/57 (5%)
Frame = +3
Query: 723 PXAXPPXT*RPXPXDPPFXXXX---AXPXXGPXHPXPPXXXGTXXPPNPXSGXXXPP 884
P PP T P P PP P P PP G PP P G PP
Sbjct: 299 PPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 355
Score = 31.5 bits (68), Expect = 0.83
Identities = 17/46 (36%), Positives = 17/46 (36%)
Frame = +3
Query: 723 PXAXPPXT*RPXPXDPPFXXXXAXPXXGPXHPXPPXXXGTXXPPNP 860
P PP T P P PP P G P PP G PP P
Sbjct: 315 PGGLPPITGGPPPPPPP---GGLPPISGGPPPPPPPPGGCPPPPPP 357
Score = 31.5 bits (68), Expect = 0.83
Identities = 21/76 (27%), Positives = 23/76 (30%)
Frame = +2
Query: 656 GXAPXXTXCTPPXCXRPPXXXPPXRXTPPYLKTXXXGPXVQXXXRXPXXWSGSSXTPPXX 835
G P T PP PP PP PP G P + G PP
Sbjct: 316 GGLPPITGGPPPP--PPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 373
Query: 836 GDXXPPKPXFXEXXPP 883
G P P + PP
Sbjct: 374 GMFAPMAPVIPDYLPP 389
>AF000192-2|AAB52888.1| 196|Caenorhabditis elegans Rab family
protein 37 protein.
Length = 196
Score = 33.1 bits (72), Expect = 0.27
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +2
Query: 473 LDVLDTAGQEEFSAMREQYMRKGDGFLIVFSXDGQA 580
L + DTAGQE F ++ Y R D L+V+ +A
Sbjct: 54 LQIWDTAGQERFRSVTTSYYRDADALLLVYDIANRA 89
>AB162902-1|BAD32698.1| 196|Caenorhabditis elegans Rab37 protein.
Length = 196
Score = 33.1 bits (72), Expect = 0.27
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +2
Query: 473 LDVLDTAGQEEFSAMREQYMRKGDGFLIVFSXDGQA 580
L + DTAGQE F ++ Y R D L+V+ +A
Sbjct: 54 LQIWDTAGQERFRSVTTSYYRDADALLLVYDIANRA 89
>U43283-2|AAC69020.1| 205|Caenorhabditis elegans Rab family protein
6.2 protein.
Length = 205
Score = 32.7 bits (71), Expect = 0.36
Identities = 21/83 (25%), Positives = 37/83 (44%), Gaps = 1/83 (1%)
Frame = +2
Query: 317 LPTVKLXXXXXXXXXKSAITIQFFQKLFVTDYDPTIEDSYIQHTE-VDGQWCILDVLDTA 493
L KL K+++ +F F Y TI ++ T ++ + L + DTA
Sbjct: 8 LKKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 67
Query: 494 GQEEFSAMREQYMRKGDGFLIVF 562
GQE F ++ Y+R ++V+
Sbjct: 68 GQERFRSLIPSYIRDSTVAVVVY 90
>U68258-1|AAB16973.1| 127|Caenorhabditis elegans rab11-like
protein.
Length = 127
Score = 32.3 bits (70), Expect = 0.47
Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +2
Query: 362 KSAITIQFFQKLFVTDYDPTIEDSYIQHT-EVDGQWCILDVLDTAGQEEFSAMREQYMRK 538
KS + +F + F + TI + + V+G+ + DTAGQE + A+ Y R
Sbjct: 24 KSNLLSRFTRNEFHLESKSTIGVEFATRSISVEGKTVKAQIWDTAGQERYRAITSAYYRG 83
Query: 539 GDGFLIVF 562
G L+V+
Sbjct: 84 AVGALLVY 91
>AF003139-1|AAB54158.1| 211|Caenorhabditis elegans Rab family
protein 11.1 protein.
Length = 211
Score = 32.3 bits (70), Expect = 0.47
Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +2
Query: 362 KSAITIQFFQKLFVTDYDPTIEDSYIQHT-EVDGQWCILDVLDTAGQEEFSAMREQYMRK 538
KS + +F + F + TI + + V+G+ + DTAGQE + A+ Y R
Sbjct: 24 KSNLLSRFTRNEFNLESKSTIGVEFATRSISVEGKTVKAQIWDTAGQERYRAITSAYYRG 83
Query: 539 GDGFLIVF 562
G L+V+
Sbjct: 84 AVGALLVY 91
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical
protein W01B6.7 protein.
Length = 301
Score = 31.1 bits (67), Expect = 1.1
Identities = 25/87 (28%), Positives = 26/87 (29%), Gaps = 6/87 (6%)
Frame = +3
Query: 618 PQG*GQRLVSDGXGGXXGXXXAPPXXAXGRRXLXRPXAXPPXT*RPXPXDPPFXXXXAXP 797
P G G G G G AP G P PP +P P PP A P
Sbjct: 106 PPGPGGSPGKPGKPGKPGAPGAPGNPGKGASAPCEPVTQPPC--QPCPGGPPGPAGPAGP 163
Query: 798 XX------GPXHPXPPXXXGTXXPPNP 860
P P P G PP P
Sbjct: 164 PGPPGPDGNPGSPAGPSGPGPAGPPGP 190
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 31.1 bits (67), Expect = 1.1
Identities = 25/87 (28%), Positives = 26/87 (29%), Gaps = 6/87 (6%)
Frame = +3
Query: 618 PQG*GQRLVSDGXGGXXGXXXAPPXXAXGRRXLXRPXAXPPXT*RPXPXDPPFXXXXAXP 797
P G G G G G AP G P PP +P P PP A P
Sbjct: 106 PPGPGGSPGKPGKPGKPGAPGAPGNPGKGASAPCEPVTQPPC--QPCPGGPPGPAGPAGP 163
Query: 798 XX------GPXHPXPPXXXGTXXPPNP 860
P P P G PP P
Sbjct: 164 PGPPGPDGNPGSPAGPSGPGPAGPPGP 190
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 2 (col-2) gene, complete
cds. ).
Length = 301
Score = 31.1 bits (67), Expect = 1.1
Identities = 25/87 (28%), Positives = 26/87 (29%), Gaps = 6/87 (6%)
Frame = +3
Query: 618 PQG*GQRLVSDGXGGXXGXXXAPPXXAXGRRXLXRPXAXPPXT*RPXPXDPPFXXXXAXP 797
P G G G G G AP G P PP +P P PP A P
Sbjct: 106 PPGPGGSPGKPGKPGKPGAPGAPGNPGKGASAPCEPVTQPPC--QPCPGGPPGPAGPAGP 163
Query: 798 XX------GPXHPXPPXXXGTXXPPNP 860
P P P G PP P
Sbjct: 164 PGPPGPDGNPGSPAGPSGPGPAGPPGP 190
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 31.1 bits (67), Expect = 1.1
Identities = 25/87 (28%), Positives = 26/87 (29%), Gaps = 6/87 (6%)
Frame = +3
Query: 618 PQG*GQRLVSDGXGGXXGXXXAPPXXAXGRRXLXRPXAXPPXT*RPXPXDPPFXXXXAXP 797
P G G G G G AP G P PP +P P PP A P
Sbjct: 106 PPGPGGSPGKPGKPGKPGAPGAPGNPGKGASAPCEPVTQPPC--QPCPGGPPGPAGPAGP 163
Query: 798 XX------GPXHPXPPXXXGTXXPPNP 860
P P P G PP P
Sbjct: 164 PGPPGPDGNPGSPAGPSGPGPAGPPGP 190
>Z92803-6|CAB07240.1| 215|Caenorhabditis elegans Hypothetical
protein K01G5.4 protein.
Length = 215
Score = 30.7 bits (66), Expect = 1.4
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +2
Query: 476 DVLDTAGQEEFSAMREQYMRKGDGFLIVF 562
+V DTAGQE+F +R+ Y +G +I+F
Sbjct: 61 NVWDTAGQEKFGGLRDGYYIQGQCAIIMF 89
>U68252-1|AAB16967.1| 66|Caenorhabditis elegans rab2-like protein.
Length = 66
Score = 30.7 bits (66), Expect = 1.4
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +2
Query: 362 KSAITIQFFQKLFVTDYDPTIEDSY-IQHTEVDGQWCILDVLDTAGQE 502
KS + +QF K F +D TI + + +DG+ L + DTAGQE
Sbjct: 19 KSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGKQIKLQMWDTAGQE 66
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 30.7 bits (66), Expect = 1.4
Identities = 20/67 (29%), Positives = 24/67 (35%)
Frame = +3
Query: 684 PPXXAXGRRXLXRPXAXPPXT*RPXPXDPPFXXXXAXPXXGPXHPXPPXXXGTXXPPNPX 863
PP G L + PP P PP + P P PP G+ PP P
Sbjct: 239 PPPPPKGSPPLAGSGSPPPP---PAAGSPPPPRTGSPPPPPTGSPPPPPAGGS--PPPPR 293
Query: 864 SGXXXPP 884
+G PP
Sbjct: 294 AGSPPPP 300
Score = 29.5 bits (63), Expect = 3.3
Identities = 23/88 (26%), Positives = 29/88 (32%), Gaps = 1/88 (1%)
Frame = +3
Query: 624 G*GQRLVSDGXGGXXGXXXAPPXXAXGRRXLXR-PXAXPPXT*RPXPXDPPFXXXXAXPX 800
G Q + + G GG G R + P A P P PP + P
Sbjct: 198 GGNQGVTASGFGGQQQGFGQQQQTQNGFRGKRQAPPAGSPPPPPPPKGSPPLAGSGSPPP 257
Query: 801 XGPXHPXPPXXXGTXXPPNPXSGXXXPP 884
PP G+ PP P +G PP
Sbjct: 258 PPAAGSPPPPRTGS--PPPPPTGSPPPP 283
Score = 29.5 bits (63), Expect = 3.3
Identities = 23/74 (31%), Positives = 25/74 (33%), Gaps = 2/74 (2%)
Frame = +3
Query: 669 GXXXAPPXXAXGRRXLXRPXAXPPXT*RPXPXDPPFXXXXAXPXXG-PXHPXPP-XXXGT 842
G PP A G R + PP P PP P G P P PP T
Sbjct: 251 GSGSPPPPPAAGSPPPPRTGSPPPPP-TGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPT 309
Query: 843 XXPPNPXSGXXXPP 884
P P +G PP
Sbjct: 310 GSLPPPQAGGSPPP 323
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 30.7 bits (66), Expect = 1.4
Identities = 20/67 (29%), Positives = 24/67 (35%)
Frame = +3
Query: 684 PPXXAXGRRXLXRPXAXPPXT*RPXPXDPPFXXXXAXPXXGPXHPXPPXXXGTXXPPNPX 863
PP G L + PP P PP + P P PP G+ PP P
Sbjct: 260 PPPPPKGSPPLAGSGSPPPP---PAAGSPPPPRTGSPPPPPTGSPPPPPAGGS--PPPPR 314
Query: 864 SGXXXPP 884
+G PP
Sbjct: 315 AGSPPPP 321
Score = 29.5 bits (63), Expect = 3.3
Identities = 23/88 (26%), Positives = 29/88 (32%), Gaps = 1/88 (1%)
Frame = +3
Query: 624 G*GQRLVSDGXGGXXGXXXAPPXXAXGRRXLXR-PXAXPPXT*RPXPXDPPFXXXXAXPX 800
G Q + + G GG G R + P A P P PP + P
Sbjct: 219 GGNQGVTASGFGGQQQGFGQQQQTQNGFRGKRQAPPAGSPPPPPPPKGSPPLAGSGSPPP 278
Query: 801 XGPXHPXPPXXXGTXXPPNPXSGXXXPP 884
PP G+ PP P +G PP
Sbjct: 279 PPAAGSPPPPRTGS--PPPPPTGSPPPP 304
Score = 29.5 bits (63), Expect = 3.3
Identities = 23/74 (31%), Positives = 25/74 (33%), Gaps = 2/74 (2%)
Frame = +3
Query: 669 GXXXAPPXXAXGRRXLXRPXAXPPXT*RPXPXDPPFXXXXAXPXXG-PXHPXPP-XXXGT 842
G PP A G R + PP P PP P G P P PP T
Sbjct: 272 GSGSPPPPPAAGSPPPPRTGSPPPPP-TGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPT 330
Query: 843 XXPPNPXSGXXXPP 884
P P +G PP
Sbjct: 331 GSLPPPQAGGSPPP 344
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 30.7 bits (66), Expect = 1.4
Identities = 20/67 (29%), Positives = 24/67 (35%)
Frame = +3
Query: 684 PPXXAXGRRXLXRPXAXPPXT*RPXPXDPPFXXXXAXPXXGPXHPXPPXXXGTXXPPNPX 863
PP G L + PP P PP + P P PP G+ PP P
Sbjct: 245 PPPPPKGSPPLAGSGSPPPP---PAAGSPPPPRTGSPPPPPTGSPPPPPAGGS--PPPPR 299
Query: 864 SGXXXPP 884
+G PP
Sbjct: 300 AGSPPPP 306
Score = 29.5 bits (63), Expect = 3.3
Identities = 23/88 (26%), Positives = 29/88 (32%), Gaps = 1/88 (1%)
Frame = +3
Query: 624 G*GQRLVSDGXGGXXGXXXAPPXXAXGRRXLXR-PXAXPPXT*RPXPXDPPFXXXXAXPX 800
G Q + + G GG G R + P A P P PP + P
Sbjct: 204 GGNQGVTASGFGGQQQGFGQQQQTQNGFRGKRQAPPAGSPPPPPPPKGSPPLAGSGSPPP 263
Query: 801 XGPXHPXPPXXXGTXXPPNPXSGXXXPP 884
PP G+ PP P +G PP
Sbjct: 264 PPAAGSPPPPRTGS--PPPPPTGSPPPP 289
Score = 29.5 bits (63), Expect = 3.3
Identities = 23/74 (31%), Positives = 25/74 (33%), Gaps = 2/74 (2%)
Frame = +3
Query: 669 GXXXAPPXXAXGRRXLXRPXAXPPXT*RPXPXDPPFXXXXAXPXXG-PXHPXPP-XXXGT 842
G PP A G R + PP P PP P G P P PP T
Sbjct: 257 GSGSPPPPPAAGSPPPPRTGSPPPPP-TGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPT 315
Query: 843 XXPPNPXSGXXXPP 884
P P +G PP
Sbjct: 316 GSLPPPQAGGSPPP 329
>Z93391-6|CAJ85753.1| 198|Caenorhabditis elegans Hypothetical
protein W04G5.2 protein.
Length = 198
Score = 29.9 bits (64), Expect = 2.5
Identities = 23/86 (26%), Positives = 34/86 (39%), Gaps = 1/86 (1%)
Frame = +2
Query: 308 NENLPTVKLXXXXXXXXXKSAITIQFFQKLFVTDYDPTIEDSYIQHT-EVDGQWCILDVL 484
NE K+ KS + +F + F PTI + V+G+ + +
Sbjct: 3 NEYYYLFKIVLIGNPGVGKSNLLSRFTRNEFNLKSKPTIGVEFATKIISVEGKAVKVQIW 62
Query: 485 DTAGQEEFSAMREQYMRKGDGFLIVF 562
DTAG E F Y R G L+V+
Sbjct: 63 DTAGMERFRCGASSYYRGALGALLVY 88
>Z49068-2|CAA88855.1| 389|Caenorhabditis elegans Hypothetical
protein K01C8.2 protein.
Length = 389
Score = 29.9 bits (64), Expect = 2.5
Identities = 12/52 (23%), Positives = 22/52 (42%)
Frame = -3
Query: 576 CPSXENTMRKPSPFRMYCSRIALNSSCPAVSSTSRMHH*PSTSVCCM*ESSI 421
CP+ N + ++C+ + N+ CPA S + +CC S +
Sbjct: 25 CPNNANPLVSNGGTNLFCTSVGSNTDCPASSICVTAANGQGVLICCSQPSGV 76
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 29.5 bits (63), Expect = 3.3
Identities = 19/55 (34%), Positives = 19/55 (34%), Gaps = 5/55 (9%)
Frame = +3
Query: 735 PPXT*RPXPX---DPPFXXXXAXPXXGPXH--PXPPXXXGTXXPPNPXSGXXXPP 884
PP P P PP P GP P PP G PP P G PP
Sbjct: 53 PPGQSIPKPSFFIPPPVPNGFIPPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPP 107
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 29.5 bits (63), Expect = 3.3
Identities = 15/42 (35%), Positives = 16/42 (38%)
Frame = +3
Query: 759 PXDPPFXXXXAXPXXGPXHPXPPXXXGTXXPPNPXSGXXXPP 884
P PP A P P P P G+ PP P G PP
Sbjct: 182 PPGPPGPDGNAGPAGAPGVPGPDGDAGSPPPPGP-PGPPGPP 222
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 29.1 bits (62), Expect = 4.4
Identities = 20/67 (29%), Positives = 22/67 (32%)
Frame = -2
Query: 883 GGXXFPEXGFGGXXVPXXXGGXG*XGPXXGXAXXXLNGGSXGXGLQVXGGXAXGRXXXRR 704
GG G+GG GG G G G + GG G G GG G
Sbjct: 166 GGGGMGGGGYGGGG-DGGYGGGGFGGGGMGGYGGGMGGGGYGGGGMGGGGYGGGGDGGYG 224
Query: 703 PXAXXGG 683
P GG
Sbjct: 225 PSGGYGG 231
>U00065-10|AAA50733.2| 382|Caenorhabditis elegans Hypothetical
protein D1044.1 protein.
Length = 382
Score = 28.7 bits (61), Expect = 5.8
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = -2
Query: 388 EELDGDRTLTYSTITYYHQFHGRKIFVGWPWPSHFSSQN 272
E ++ RTLT +T+Y F G + F G+P P + +N
Sbjct: 90 ENMEILRTLTAQEVTFYSDFSGIQ-FSGFPIPRSYYGEN 127
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 28.3 bits (60), Expect = 7.7
Identities = 21/69 (30%), Positives = 21/69 (30%)
Frame = +3
Query: 660 GXXGXXXAPPXXAXGRRXLXRPXAXPPXT*RPXPXDPPFXXXXAXPXXGPXHPXPPXXXG 839
G G PP G R P PP P P P P P PP G
Sbjct: 326 GPPGMGGMPPPPPPGMRY---PGGMPPP---PPPRYPSAGPGMYPPPPPSRPPAPPSGHG 379
Query: 840 TXXPPNPXS 866
PP P S
Sbjct: 380 MIPPPPPPS 388
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 28.3 bits (60), Expect = 7.7
Identities = 21/69 (30%), Positives = 21/69 (30%)
Frame = +3
Query: 660 GXXGXXXAPPXXAXGRRXLXRPXAXPPXT*RPXPXDPPFXXXXAXPXXGPXHPXPPXXXG 839
G G PP G R P PP P P P P P PP G
Sbjct: 336 GPPGMGGMPPPPPPGMRY---PGGMPPP---PPPRYPSAGPGMYPPPPPSRPPAPPSGHG 389
Query: 840 TXXPPNPXS 866
PP P S
Sbjct: 390 MIPPPPPPS 398
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 28.3 bits (60), Expect = 7.7
Identities = 18/63 (28%), Positives = 21/63 (33%)
Frame = +3
Query: 681 APPXXAXGRRXLXRPXAXPPXT*RPXPXDPPFXXXXAXPXXGPXHPXPPXXXGTXXPPNP 860
A P + G RP P T P P + P PP GT PP P
Sbjct: 19 AAPRFSVGETASRRPPPPPKGTGTPPPPPTGEPQDLSGEGNASRRPPPPPK-GTGTPPPP 77
Query: 861 XSG 869
+G
Sbjct: 78 PTG 80
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,754,866
Number of Sequences: 27780
Number of extensions: 336606
Number of successful extensions: 1127
Number of sequences better than 10.0: 91
Number of HSP's better than 10.0 without gapping: 860
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1016
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2234373834
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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