Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_C21
         (877 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_06_0277 - 21983049-21983080,21983250-21984788,21986619-219866...    34   0.17 
12_02_0588 - 20842209-20842337,20842464-20842560,20842620-208427...    30   2.1  
02_02_0351 + 9257204-9261388                                           30   2.8  
09_02_0408 - 8638298-8638594,8638717-8639103,8639415-8640413,864...    29   6.5  

>09_06_0277 -
           21983049-21983080,21983250-21984788,21986619-21986655,
           21987612-21987665,21987781-21987893,21988272-21988660,
           21988783-21988903,21989245-21989342,21989963-21990153
          Length = 857

 Score = 33.9 bits (74), Expect = 0.17
 Identities = 16/40 (40%), Positives = 21/40 (52%)
 Frame = +3

Query: 591 KKKLRIQCNLCKAIIRSDSYQKHLMRHQSATHLVCEVCGK 710
           KKK R++   C    R    +K L++HQ A H  C VC K
Sbjct: 3   KKKKRVEKVFCYYCDREFDDEKILVQHQKAKHFKCHVCHK 42


>12_02_0588 -
           20842209-20842337,20842464-20842560,20842620-20842733,
           20843140-20843749,20844739-20845462,20845542-20845620,
           20845783-20845865,20846148-20846226,20846332-20846420,
           20846499-20846591,20847288-20847337,20847417-20847600,
           20849227-20849542,20849626-20849657
          Length = 892

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 16/44 (36%), Positives = 22/44 (50%)
 Frame = +3

Query: 693 CEVCGKLYRXRQPDQTLTVXQXIIXPMCAKYVHXEADSMSX*KY 824
           C VC K+YR  +      V   +   +C K+VH E D +S  KY
Sbjct: 276 CPVCLKVYRDSE------VIPMVCCDVCEKWVHIECDGISEEKY 313


>02_02_0351 + 9257204-9261388
          Length = 1394

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 21/86 (24%), Positives = 39/86 (45%), Gaps = 4/86 (4%)
 Frame = +3

Query: 399  LIPIPNVFVATALPFSKGAVKFRNTAIDSDKLLHQAVTADFQIDNANDEDSNQSEEMPHV 578
            L PIP+  + T +  S+         +  +KL+          DN +  +    EEMPHV
Sbjct: 970  LPPIPHTSMLTCVIVSERKTDLLR--LQENKLISHGYRGALVFDNLDKVEDMSIEEMPHV 1027

Query: 579  AYKEKKKL----RIQCNLCKAIIRSD 644
            +  + +KL    R+    C++++ S+
Sbjct: 1028 SLTDLQKLSSLTRLAVKGCESMLFSE 1053


>09_02_0408 - 8638298-8638594,8638717-8639103,8639415-8640413,
            8640501-8640655,8640768-8640855,8640941-8641044,
            8641199-8641421,8641536-8641620,8641706-8642097,
            8642962-8643150
          Length = 972

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 21/71 (29%), Positives = 30/71 (42%), Gaps = 2/71 (2%)
 Frame = +3

Query: 543  EDSNQSEEMPHVAYKEKKKLRIQCNLCKAIIRSDSYQKHLMRHQSATHLVCEVCG--KLY 716
            ED     E     Y E +KL +Q    + ++  D Y K  +R + A      VC    L 
Sbjct: 852  EDLQPLGEKLRANYVETQKLLLQVAGHRDLLEGDPYLKQRLRLRDAYITTLNVCQAYTLK 911

Query: 717  RXRQPDQTLTV 749
            R R PD  +T+
Sbjct: 912  RIRDPDYHVTL 922


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,635,225
Number of Sequences: 37544
Number of extensions: 371187
Number of successful extensions: 998
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 977
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 998
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2467979640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)