Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP10_F_C21
(877 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z83228-4|CAB05735.2| 318|Caenorhabditis elegans Hypothetical pr... 33 0.20
Z69883-6|CAA93744.2| 461|Caenorhabditis elegans Hypothetical pr... 33 0.27
Z70780-6|CAA94823.1| 614|Caenorhabditis elegans Hypothetical pr... 33 0.35
AL021483-7|CAA16344.3| 218|Caenorhabditis elegans Hypothetical ... 33 0.35
AF125451-2|AAP82633.1| 167|Caenorhabditis elegans Hypothetical ... 32 0.47
AC006614-2|AAF39763.1| 254|Caenorhabditis elegans Drosophila od... 32 0.62
Z83227-4|CAB05729.2| 336|Caenorhabditis elegans Hypothetical pr... 31 0.82
Z82090-4|CAB05008.2| 543|Caenorhabditis elegans Hypothetical pr... 31 0.82
U63996-1|AAC47234.1| 336|Caenorhabditis elegans zinc finger pro... 31 0.82
U70850-3|AAB09122.3| 596|Caenorhabditis elegans Zinc finger plu... 31 1.1
AY289599-1|AAP43944.1| 596|Caenorhabditis elegans ZAG-1 protein. 31 1.1
AY224511-1|AAP37457.1| 596|Caenorhabditis elegans ZAG-1 protein. 31 1.1
AC006642-9|AAX88828.1| 339|Caenorhabditis elegans Laterally sym... 31 1.1
AC006642-8|AAF39827.2| 365|Caenorhabditis elegans Laterally sym... 31 1.1
AF003137-3|AAB93640.1| 625|Caenorhabditis elegans Hypothetical ... 30 1.9
Z49867-1|CAA90027.1| 312|Caenorhabditis elegans Hypothetical pr... 30 2.5
Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical pr... 29 3.3
U41039-3|AAK68627.2| 537|Caenorhabditis elegans Synapse defecti... 29 3.3
U97017-1|AAB52363.1| 2643|Caenorhabditis elegans Temporarily ass... 29 4.4
U23454-9|AAC46522.2| 249|Caenorhabditis elegans Hypothetical pr... 29 4.4
AL034392-4|CAA22307.2| 203|Caenorhabditis elegans Hypothetical ... 29 4.4
AF003137-2|AAB93641.2| 464|Caenorhabditis elegans Temporarily a... 29 4.4
Z71260-1|CAA95798.1| 744|Caenorhabditis elegans Hypothetical pr... 29 5.8
U60113-1|AAB03334.1| 715|Caenorhabditis elegans SEM-4 short for... 29 5.8
U60112-1|AAB03333.1| 744|Caenorhabditis elegans SEM-4 long form... 29 5.8
AL132860-29|CAB60505.2| 386|Caenorhabditis elegans Hypothetical... 29 5.8
Z96047-5|CAB09415.1| 379|Caenorhabditis elegans Hypothetical pr... 28 7.6
Z81047-4|CAB02831.3| 364|Caenorhabditis elegans Hypothetical pr... 28 7.6
Z68300-2|CAA92616.2| 440|Caenorhabditis elegans Hypothetical pr... 28 7.6
>Z83228-4|CAB05735.2| 318|Caenorhabditis elegans Hypothetical
protein F52F12.4 protein.
Length = 318
Score = 33.5 bits (73), Expect = 0.20
Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +3
Query: 609 QCNLC-KAIIRSDSYQKHLMRHQSATHLVCEVCGKLYRXR 725
QCN+C K + Q+H + H +C+VCG+ +R +
Sbjct: 38 QCNVCNKMFMNYKGLQQHSVIHTDTKPYICDVCGRGFRYK 77
>Z69883-6|CAA93744.2| 461|Caenorhabditis elegans Hypothetical
protein C27C12.2 protein.
Length = 461
Score = 33.1 bits (72), Expect = 0.27
Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = +3
Query: 540 DEDSNQSEEMP-HVAYKEKKKLRIQCNLC-KAIIRSDSYQKHLMRHQSATHLVCEVCGKL 713
D ++S+E+ H+ +K QC +C +A RSD H+ H C++CG+
Sbjct: 382 DRRFSRSDELTRHIRIHTGQK-PFQCRICMRAFSRSDHLTTHVRTHTGEKPFSCDICGRK 440
Query: 714 Y 716
+
Sbjct: 441 F 441
>Z70780-6|CAA94823.1| 614|Caenorhabditis elegans Hypothetical
protein F46B6.7 protein.
Length = 614
Score = 32.7 bits (71), Expect = 0.35
Identities = 17/69 (24%), Positives = 33/69 (47%), Gaps = 3/69 (4%)
Frame = +3
Query: 492 LLHQAVTADFQI-DNANDEDSNQSEEMPHVAYKEKKKLRIQCNLCKAIIRSD--SYQKHL 662
L H T +F + N +D+ N + + + Y K+ C +C+ + + QKH+
Sbjct: 463 LEHMKTTHEFDLLKNVSDDKLNSYQRLRLINYIRKQNYHADCWVCQKTEFENPLALQKHI 522
Query: 663 MRHQSATHL 689
+ H+ +HL
Sbjct: 523 LEHKPLSHL 531
>AL021483-7|CAA16344.3| 218|Caenorhabditis elegans Hypothetical
protein Y38H8A.5 protein.
Length = 218
Score = 32.7 bits (71), Expect = 0.35
Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = +3
Query: 609 QCNLC-KAIIRSDSYQKHLMRHQSATHLVCEVCGK 710
+C C K RS + H+ HQ VCE+CGK
Sbjct: 109 KCKTCGKCFNRSSTLNTHVRIHQGFKPFVCEICGK 143
Score = 30.3 bits (65), Expect = 1.9
Identities = 13/45 (28%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Frame = +3
Query: 588 EKKKLRIQCNLC-KAIIRSDSYQKHLMRHQSATHLVCEVCGKLYR 719
E + + C +C K + +H+ H VC+VCGK +R
Sbjct: 46 ENSRKKFPCEICGKQFNAHYNLTRHMPVHTGERPFVCKVCGKAFR 90
>AF125451-2|AAP82633.1| 167|Caenorhabditis elegans Hypothetical
protein Y37E11B.1b protein.
Length = 167
Score = 32.3 bits (70), Expect = 0.47
Identities = 18/74 (24%), Positives = 35/74 (47%), Gaps = 6/74 (8%)
Frame = +3
Query: 573 HVAYKEKKKLRIQCNLC-KAIIRSDSYQKHLMRHQ-SATHLVCEVCGKLYRXR----QPD 734
H ++ + +++C+ C K ++ +KH + H ++CEVCGK Y + +
Sbjct: 30 HERIHDEAERKLECSTCQKRFHNAELLRKHQIVHDIPKKSIICEVCGKKYSSKSALAKHK 89
Query: 735 QTLTVXQXIIXPMC 776
+T + PMC
Sbjct: 90 RTHETDKRFTCPMC 103
>AC006614-2|AAF39763.1| 254|Caenorhabditis elegans Drosophila
odd-skipped-like protein2 protein.
Length = 254
Score = 31.9 bits (69), Expect = 0.62
Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = +3
Query: 612 CNLC-KAIIRSDSYQKHLMRHQSATHLVCEVCGK 710
C++C KA R D + H HQ CE+CGK
Sbjct: 154 CDVCGKAFRRQDHLRDHKYIHQKDRPFKCEICGK 187
>Z83227-4|CAB05729.2| 336|Caenorhabditis elegans Hypothetical
protein F45B8.4 protein.
Length = 336
Score = 31.5 bits (68), Expect = 0.82
Identities = 19/89 (21%), Positives = 38/89 (42%), Gaps = 1/89 (1%)
Frame = +3
Query: 462 FRNTAIDSDKLLHQAVTADFQIDNANDEDSNQSEEMPHVAYKEKKKLRIQCNLC-KAIIR 638
F+ ++ S LL + T + + +S+ H +K +C +C KA +
Sbjct: 163 FKRSSTLSTHLLIHSDTRPYPCEYCGKRFHQKSDMKKHTYIHTGEKPH-KCTVCGKAFSQ 221
Query: 639 SDSYQKHLMRHQSATHLVCEVCGKLYRXR 725
S + H +H C+VCG+ ++ +
Sbjct: 222 SSNLITHTRKHTGFKPFACDVCGRTFQRK 250
Score = 30.7 bits (66), Expect = 1.4
Identities = 13/42 (30%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Frame = +3
Query: 603 RIQCNLC-KAIIRSDSYQKHLMRHQSATHLVCEVCGKLYRXR 725
+ +C C K RS + HL+ H CE CGK + +
Sbjct: 153 QFECKQCGKTFKRSSTLSTHLLIHSDTRPYPCEYCGKRFHQK 194
>Z82090-4|CAB05008.2| 543|Caenorhabditis elegans Hypothetical
protein ZK337.2 protein.
Length = 543
Score = 31.5 bits (68), Expect = 0.82
Identities = 12/37 (32%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +3
Query: 609 QCNLC-KAIIRSDSYQKHLMRHQSATHLVCEVCGKLY 716
+CN+C K+ RSD +H+ H A C C +++
Sbjct: 370 KCNMCSKSFSRSDMLTRHMRLHTGAKPYSCPTCNQVF 406
>U63996-1|AAC47234.1| 336|Caenorhabditis elegans zinc finger
protein PAG-3 protein.
Length = 336
Score = 31.5 bits (68), Expect = 0.82
Identities = 19/89 (21%), Positives = 38/89 (42%), Gaps = 1/89 (1%)
Frame = +3
Query: 462 FRNTAIDSDKLLHQAVTADFQIDNANDEDSNQSEEMPHVAYKEKKKLRIQCNLC-KAIIR 638
F+ ++ S LL + T + + +S+ H +K +C +C KA +
Sbjct: 163 FKRSSTLSTHLLIHSDTRPYPCEYCGKRFHQKSDMKKHTYIHTGEKPH-KCTVCGKAFSQ 221
Query: 639 SDSYQKHLMRHQSATHLVCEVCGKLYRXR 725
S + H +H C+VCG+ ++ +
Sbjct: 222 SSNLITHTRKHTGFKPFACDVCGRTFQRK 250
Score = 30.7 bits (66), Expect = 1.4
Identities = 13/42 (30%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Frame = +3
Query: 603 RIQCNLC-KAIIRSDSYQKHLMRHQSATHLVCEVCGKLYRXR 725
+ +C C K RS + HL+ H CE CGK + +
Sbjct: 153 QFECKQCGKTFKRSSTLSTHLLIHSDTRPYPCEYCGKRFHQK 194
>U70850-3|AAB09122.3| 596|Caenorhabditis elegans Zinc finger plus
homeodomain, axonguidance protein 1 protein.
Length = 596
Score = 31.1 bits (67), Expect = 1.1
Identities = 17/69 (24%), Positives = 33/69 (47%), Gaps = 3/69 (4%)
Frame = +3
Query: 528 DNANDEDSNQSE--EMPHVAYKEKKKLRIQCNLCKAII-RSDSYQKHLMRHQSATHLVCE 698
D+A+ SN+S+ + P KE++ L C+ C + + S +H H C+
Sbjct: 454 DDASSLCSNESKLLKFPTTPLKEEEGL-FSCDQCDKVFGKQSSLARHKYEHSGQRPYKCD 512
Query: 699 VCGKLYRXR 725
+C K ++ +
Sbjct: 513 ICEKAFKHK 521
>AY289599-1|AAP43944.1| 596|Caenorhabditis elegans ZAG-1 protein.
Length = 596
Score = 31.1 bits (67), Expect = 1.1
Identities = 17/69 (24%), Positives = 33/69 (47%), Gaps = 3/69 (4%)
Frame = +3
Query: 528 DNANDEDSNQSE--EMPHVAYKEKKKLRIQCNLCKAII-RSDSYQKHLMRHQSATHLVCE 698
D+A+ SN+S+ + P KE++ L C+ C + + S +H H C+
Sbjct: 454 DDASSLCSNESKLLKFPTTPLKEEEGL-FSCDQCDKVFGKQSSLARHKYEHSGQRPYKCD 512
Query: 699 VCGKLYRXR 725
+C K ++ +
Sbjct: 513 ICEKAFKHK 521
>AY224511-1|AAP37457.1| 596|Caenorhabditis elegans ZAG-1 protein.
Length = 596
Score = 31.1 bits (67), Expect = 1.1
Identities = 17/69 (24%), Positives = 33/69 (47%), Gaps = 3/69 (4%)
Frame = +3
Query: 528 DNANDEDSNQSE--EMPHVAYKEKKKLRIQCNLCKAII-RSDSYQKHLMRHQSATHLVCE 698
D+A+ SN+S+ + P KE++ L C+ C + + S +H H C+
Sbjct: 454 DDASSLCSNESKLLKFPTTPLKEEEGL-FSCDQCDKVFGKQSSLARHKYEHSGQRPYKCD 512
Query: 699 VCGKLYRXR 725
+C K ++ +
Sbjct: 513 ICEKAFKHK 521
>AC006642-9|AAX88828.1| 339|Caenorhabditis elegans Laterally
symmetric (defectivein lateral asymmetry) protein 2,
isoform b protein.
Length = 339
Score = 31.1 bits (67), Expect = 1.1
Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +3
Query: 609 QCNLCKAIIRS-DSYQKHLMRHQSATHLVCEVCGKLYRXR 725
QCN+C I S Q+H + H C++C K +R +
Sbjct: 53 QCNVCNKIFVSYKGLQQHAVIHTDQKPFRCDICSKSFRFK 92
>AC006642-8|AAF39827.2| 365|Caenorhabditis elegans Laterally
symmetric (defectivein lateral asymmetry) protein 2,
isoform a protein.
Length = 365
Score = 31.1 bits (67), Expect = 1.1
Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +3
Query: 609 QCNLCKAIIRS-DSYQKHLMRHQSATHLVCEVCGKLYRXR 725
QCN+C I S Q+H + H C++C K +R +
Sbjct: 79 QCNVCNKIFVSYKGLQQHAVIHTDQKPFRCDICSKSFRFK 118
>AF003137-3|AAB93640.1| 625|Caenorhabditis elegans Hypothetical
protein C27A12.2 protein.
Length = 625
Score = 30.3 bits (65), Expect = 1.9
Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Frame = +3
Query: 501 QAVTADFQIDNANDEDSNQSEEMPHVAYKEKKKLRIQCNLCKAIIRSDS-YQKHLMRHQS 677
+A D+ ID A + + SE PH +++K L +C C + + S + H+ H
Sbjct: 420 RAENLDWIID-AVAKGVDVSEASPH--HRKKPTLH-KCEYCGRVDKYPSKIRAHMRTHTG 475
Query: 678 ATHLVCEVCGKLYRXRQP 731
CE+CG + + P
Sbjct: 476 EKPFKCEICGMAFSQKTP 493
>Z49867-1|CAA90027.1| 312|Caenorhabditis elegans Hypothetical
protein C33D3.3 protein.
Length = 312
Score = 29.9 bits (64), Expect = 2.5
Identities = 14/43 (32%), Positives = 20/43 (46%)
Frame = +3
Query: 609 QCNLCKAIIRSDSYQKHLMRHQSATHLVCEVCGKLYRXRQPDQ 737
+C+ C AII S Y + H T LVC C + + D+
Sbjct: 136 KCSHCTAIICSHCYPYNSYSHPKTTKLVCRNCHLYFHHYKTDR 178
>Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical
protein B0035.1b protein.
Length = 341
Score = 29.5 bits (63), Expect = 3.3
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +3
Query: 591 KKKLRIQCNLCKAIIRSDSYQKHLMRHQSATHLVCEVCGK 710
+KK ++ C R +K L++HQ A H C +C K
Sbjct: 3 RKKKKVDKPWCWYCNREFDDEKILIQHQKAKHFKCHICHK 42
>Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical
protein B0035.1a protein.
Length = 298
Score = 29.5 bits (63), Expect = 3.3
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +3
Query: 591 KKKLRIQCNLCKAIIRSDSYQKHLMRHQSATHLVCEVCGK 710
+KK ++ C R +K L++HQ A H C +C K
Sbjct: 3 RKKKKVDKPWCWYCNREFDDEKILIQHQKAKHFKCHICHK 42
>U41039-3|AAK68627.2| 537|Caenorhabditis elegans Synapse defective
protein 9, isoformc protein.
Length = 537
Score = 29.5 bits (63), Expect = 3.3
Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 4/39 (10%)
Frame = +3
Query: 621 CKAIIRSDSYQKHLMRHQSATH----LVCEVCGKLYRXR 725
C +S S K L +HQ H +CE CGK +R R
Sbjct: 22 CPQCPKSFSSTKLLQQHQQMFHTDKAFICETCGKAFRFR 60
>U97017-1|AAB52363.1| 2643|Caenorhabditis elegans Temporarily assigned
gene nameprotein 162 protein.
Length = 2643
Score = 29.1 bits (62), Expect = 4.4
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = +2
Query: 350 NIQDAIKTITGIEICETDSYPKCVCSNCFALLQGSC*IP 466
N+ D K + + +D +CVCS F L+ G C P
Sbjct: 1942 NVPDECKKCPSLCLRSSDKKFQCVCSQGFELVNGKCRSP 1980
>U23454-9|AAC46522.2| 249|Caenorhabditis elegans Hypothetical
protein C10A4.8 protein.
Length = 249
Score = 29.1 bits (62), Expect = 4.4
Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +3
Query: 573 HVAYKEKKKLR-IQCNLC-KAIIRSDSYQKHLMRHQSATHLVCEVCGKLYR 719
+V + +K L+ +C++C K RS++ H H CE CG+ +R
Sbjct: 156 YVDHSQKGNLKKYRCDVCDKTFSRSNTLITHKRIHTGEKPFKCEHCGRAFR 206
>AL034392-4|CAA22307.2| 203|Caenorhabditis elegans Hypothetical
protein Y40B1A.4 protein.
Length = 203
Score = 29.1 bits (62), Expect = 4.4
Identities = 13/35 (37%), Positives = 15/35 (42%)
Frame = +3
Query: 612 CNLCKAIIRSDSYQKHLMRHQSATHLVCEVCGKLY 716
CN K RSD Q+H H C CGK +
Sbjct: 142 CN--KKFTRSDELQRHRRTHTGEKRFACNHCGKKF 174
>AF003137-2|AAB93641.2| 464|Caenorhabditis elegans Temporarily
assigned gene nameprotein 146 protein.
Length = 464
Score = 29.1 bits (62), Expect = 4.4
Identities = 17/69 (24%), Positives = 31/69 (44%), Gaps = 6/69 (8%)
Frame = +3
Query: 543 EDSNQSEEMPHVAYKEKK---KLRI--QCNLCKAIIRSDS-YQKHLMRHQSATHLVCEVC 704
E+ + ++P Y++KK KL C +C ++ S +H+ H C++C
Sbjct: 31 EELEEIVKIPDSTYRKKKGNQKLPTVTTCEVCGVALKYPSRIMEHMRTHTGEKPYECDIC 90
Query: 705 GKLYRXRQP 731
G + R P
Sbjct: 91 GMRFTQRTP 99
>Z71260-1|CAA95798.1| 744|Caenorhabditis elegans Hypothetical
protein F15C11.1 protein.
Length = 744
Score = 28.7 bits (61), Expect = 5.8
Identities = 12/40 (30%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = +3
Query: 609 QCNLC-KAIIRSDSYQKHLMRHQSATHLVCEVCGKLYRXR 725
QC +C K S + Q H+ H C++CG+ + R
Sbjct: 590 QCGVCFKHFSSSSALQIHMRTHTGDKPFKCDMCGRAFTTR 629
>U60113-1|AAB03334.1| 715|Caenorhabditis elegans SEM-4 short form
protein.
Length = 715
Score = 28.7 bits (61), Expect = 5.8
Identities = 12/40 (30%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = +3
Query: 609 QCNLC-KAIIRSDSYQKHLMRHQSATHLVCEVCGKLYRXR 725
QC +C K S + Q H+ H C++CG+ + R
Sbjct: 561 QCGVCFKHFSSSSALQIHMRTHTGDKPFKCDMCGRAFTTR 600
>U60112-1|AAB03333.1| 744|Caenorhabditis elegans SEM-4 long form
protein.
Length = 744
Score = 28.7 bits (61), Expect = 5.8
Identities = 12/40 (30%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = +3
Query: 609 QCNLC-KAIIRSDSYQKHLMRHQSATHLVCEVCGKLYRXR 725
QC +C K S + Q H+ H C++CG+ + R
Sbjct: 590 QCGVCFKHFSSSSALQIHMRTHTGDKPFKCDMCGRAFTTR 629
>AL132860-29|CAB60505.2| 386|Caenorhabditis elegans Hypothetical
protein Y56A3A.28 protein.
Length = 386
Score = 28.7 bits (61), Expect = 5.8
Identities = 10/41 (24%), Positives = 19/41 (46%)
Frame = +3
Query: 597 KLRIQCNLCKAIIRSDSYQKHLMRHQSATHLVCEVCGKLYR 719
K +++C C ++ ++ H H C+ CGK +R
Sbjct: 207 KPKMECPTCGLVLYRHNFAAHFRIHTGEQPYGCDYCGKRFR 247
>Z96047-5|CAB09415.1| 379|Caenorhabditis elegans Hypothetical
protein DY3.6 protein.
Length = 379
Score = 28.3 bits (60), Expect = 7.6
Identities = 20/84 (23%), Positives = 37/84 (44%), Gaps = 1/84 (1%)
Frame = +3
Query: 531 NANDEDSNQSEEMPHVAYKEKKKLRIQC-NLCKAIIRSDSYQKHLMRHQSATHLVCEVCG 707
+A D DSN + +PH K K I C ++ +A R D + + +C+V
Sbjct: 100 SAEDSDSNDKDWIPHCFVKSTSKEFIGCTSMSEAFHRLD--LARAVNDVRRFNFICKVVQ 157
Query: 708 KLYRXRQPDQTLTVXQXIIXPMCA 779
L + P+ + T + ++ + A
Sbjct: 158 ILVEEKLPNLSATARKSLLGILSA 181
>Z81047-4|CAB02831.3| 364|Caenorhabditis elegans Hypothetical
protein C41G6.6 protein.
Length = 364
Score = 28.3 bits (60), Expect = 7.6
Identities = 22/87 (25%), Positives = 37/87 (42%), Gaps = 7/87 (8%)
Frame = -2
Query: 372 VFIASCILKVFLLEKI---Y*YPSIRQILQILSPCTEFEGDCEFCLSFWDNLTLRFFLSN 202
+F+ + FL++K Y Y + C EFE +C F + F + T++++ N
Sbjct: 1 MFVIKLFVFCFLVKKFQFQYKYDDYDSTNFLQEKC-EFEPECIFPMGFITSATVKYYPMN 59
Query: 201 FKNIYEDIR----CTFYNRYLTVFFLN 133
+ DI+ C LT F N
Sbjct: 60 CSRVCADIQIEQHCDLSVEQLTYLFRN 86
>Z68300-2|CAA92616.2| 440|Caenorhabditis elegans Hypothetical
protein T22B3.1 protein.
Length = 440
Score = 28.3 bits (60), Expect = 7.6
Identities = 14/49 (28%), Positives = 26/49 (53%), Gaps = 4/49 (8%)
Frame = +3
Query: 552 NQSEEMPHVAY-KEKKKLRIQCNLCKAIIRS---DSYQKHLMRHQSATH 686
N+ E P A+ K +C +C+ +++S ++ +HLMRH S +
Sbjct: 348 NRKTEHPVWAFFKRTGDGNAECIICQGVVKSPCSSNFMRHLMRHHSTEY 396
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,122,756
Number of Sequences: 27780
Number of extensions: 375126
Number of successful extensions: 1225
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1165
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1221
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2202903780
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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