Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_C18
         (846 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0467 - 3524598-3524837,3524939-3525466,3526242-3526892,352...    31   0.87 
05_05_0286 - 23863234-23863777,23863933-23864107,23864184-238643...    28   8.1  

>07_01_0467 - 3524598-3524837,3524939-3525466,3526242-3526892,
            3527015-3527500,3527580-3527792,3527885-3528174,
            3528276-3528418,3528633-3528855,3528983-3529160,
            3529598-3529867
          Length = 1073

 Score = 31.5 bits (68), Expect = 0.87
 Identities = 19/65 (29%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
 Frame = +1

Query: 271  AAKCEASVGNFLGEAEHYISAARQFIKAEMKLKSMKFYSPERENLEAGIGCFLQ-ALNKY 447
            +A+ EASV + +  +EH      + I   ++ K+ +  S +++N + G+  FL  AL+  
Sbjct: 815  SAEKEASVADSIKPSEHVTFINTKAISCPLENKASQPTSSKKKNRKGGLSLFLSGALDDT 874

Query: 448  PEKSP 462
            P+ SP
Sbjct: 875  PKPSP 879


>05_05_0286 -
           23863234-23863777,23863933-23864107,23864184-23864377,
           23865315-23865322
          Length = 306

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 29/112 (25%), Positives = 49/112 (43%), Gaps = 3/112 (2%)
 Frame = +1

Query: 184 SEATNEFIALAIQCEHSEQPTFAGHSYVGAAKCEASVGNFLGEAE---HYISAARQFIKA 354
           +E T++ I L  + + +E+P F  H+Y    + E  +   +        Y+S    F K 
Sbjct: 23  NECTDQLINLMTKLKINEKPEFYSHAYQRGERWEYDMTVKINPPRGRLFYVSII--FTKT 80

Query: 355 EMKLKSMKFYSPERENLEAGIGCFLQALNKYPEKSPIRTSLLMELASNLSTL 510
                S   Y P RE  E    C LQ ++ + +      S+ ME A ++S+L
Sbjct: 81  GCNTLSYS-YHPMREPGED--YCTLQNVDYHEQPVKATMSIWMEAADDMSSL 129


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,393,773
Number of Sequences: 37544
Number of extensions: 362201
Number of successful extensions: 926
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 907
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 926
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2350456800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)