Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_C16
         (884 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0173 + 15414628-15414890,15415001-15415074,15416322-154164...    29   5.0  
02_04_0624 + 24538095-24538183,24538429-24538612,24538725-245388...    29   5.0  
05_06_0172 + 26138238-26138474,26138712-26139854                       28   8.7  

>10_08_0173 +
           15414628-15414890,15415001-15415074,15416322-15416401,
           15417186-15417231,15417334-15417368,15417751-15417771,
           15418418-15419133,15419292-15419324,15419517-15419813,
           15420213-15420659,15420738-15420886,15421408-15421697,
           15421774-15421898,15422006-15422156
          Length = 908

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 11/33 (33%), Positives = 21/33 (63%)
 Frame = -1

Query: 734 TGPPVFVKICXGAFLQRLDAVKEIIHAQLQSTY 636
           + PP  V +  G  + R+DAV++ + A++Q+ Y
Sbjct: 49  SAPPPLVGVPPGVLMARIDAVRDELAAEVQAKY 81


>02_04_0624 +
           24538095-24538183,24538429-24538612,24538725-24538886,
           24538988-24539225,24539301-24539370,24539439-24539530,
           24539799-24539836,24540018-24540039,24540462-24540618,
           24540702-24540753,24542144-24542207,24542279-24542362,
           24543418-24543543,24543622-24543818,24543903-24544091,
           24544186-24544434,24544507-24544556,24544977-24545059,
           24545164-24545449,24545751-24545794,24545878-24546626
          Length = 1074

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
 Frame = -2

Query: 328 LLAKFLFSEYLMGLVEAYLFPVDLAPKHRIVSVQHHENNHRTRG-HFSSTFSRNPVEFGN 152
           LL++FL SE+   L++  L  + +AP   +V  +  + N +      S        EF N
Sbjct: 71  LLSRFLSSEWRFNLIKGTLKTIYIAPMKALVQEKLRDWNMKLGSLGISCLEMTGDNEFYN 130

Query: 151 NQHLHDGSLM 122
            + +HD  L+
Sbjct: 131 TKSIHDADLI 140


>05_06_0172 + 26138238-26138474,26138712-26139854
          Length = 459

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = +1

Query: 190 KSDPEFDDCSRDAVQKLFDALGPGLPEIGMPPLDPL 297
           K D   DDC+    QK+F   G G     MPP+ P+
Sbjct: 216 KMDLFVDDCAAGEEQKVFQFQGIGTDAPAMPPVLPV 251


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,259,029
Number of Sequences: 37544
Number of extensions: 370602
Number of successful extensions: 823
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 813
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 823
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2503236492
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)