Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_C14
         (894 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_05_0034 + 8431753-8431790,8431940-8432063,8432726-8433038,843...    30   2.9  
02_04_0482 + 23291986-23292181,23292289-23292317,23293500-232936...    29   5.0  

>10_05_0034 +
           8431753-8431790,8431940-8432063,8432726-8433038,
           8433189-8433251,8433778-8434058
          Length = 272

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 17/61 (27%), Positives = 28/61 (45%)
 Frame = +1

Query: 172 ENRHSTEQDRRQLPSNRLPPIEELTLGLKQKLHLQARARAAPYYIRKQEPVDLVERLLEQ 351
           +++ ST QD +  PSN  P    +      K    A  +    Y  K+ P+D +E+L+  
Sbjct: 148 KSKRSTHQDSKGHPSNTDPGPSRIINRRVTKSESSANTQLLVQYFSKRYPIDHLEQLMTG 207

Query: 352 R 354
           R
Sbjct: 208 R 208


>02_04_0482 +
           23291986-23292181,23292289-23292317,23293500-23293602,
           23293855-23293979,23294788-23294920,23295468-23295739,
           23295806-23295873,23296126-23296265,23296443-23296529,
           23296610-23297118,23297203-23298020,23298054-23298252,
           23299084-23299228,23299260-23299314,23301184-23301310,
           23301399-23301468,23301980-23302085,23302168-23302279,
           23302775-23302897,23303000-23303159,23303283-23303359,
           23303457-23303509,23303683-23303737,23304032-23304706
          Length = 1478

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 13/40 (32%), Positives = 19/40 (47%)
 Frame = +3

Query: 441 KHSICESVEHVVKSLVCMKRVGLQWCYMRRACXKRMAICD 560
           +H+ C        S + +  V L+W +  RAC  R  ICD
Sbjct: 91  RHAFCHGPAFPTLSKILLGHVALKWLHQIRAC-ARKEICD 129


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,307,282
Number of Sequences: 37544
Number of extensions: 305480
Number of successful extensions: 717
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 704
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 717
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2518669100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)