Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_C12
         (1015 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            25   2.4  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    25   2.7  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    25   2.7  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    25   2.7  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    25   2.7  
AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    25   3.6  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 24.6 bits (51), Expect = 4.8
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = +3

Query: 909 PSRKPPXXXRXPPXPXXGPPP 971
           P+ +PP     PP P  GPPP
Sbjct: 577 PNAQPPPAP--PPPPPMGPPP 595



 Score = 22.6 bits (46), Expect(2) = 2.4
 Identities = 19/80 (23%), Positives = 21/80 (26%)
 Frame = +3

Query: 615 PXNPXXKGPRLXXGPXXPXGLXPPPXNXAFPQTXGPXPTPXRVXPXPXPXPIKXXXXXXX 794
           P      G  L  GP  P    PPP            P P  +   P             
Sbjct: 513 PHGAGYDGRDLTGGPLGPPP-PPPPGGAVLNIPPQFLPPPLNLLRAPFFPLNPAQLRFPA 571

Query: 795 XXXXXPLXXPPCVPXPXPPL 854
                P   PP  P P PP+
Sbjct: 572 GFPNLPNAQPPPAPPPPPPM 591



 Score = 21.0 bits (42), Expect(2) = 2.4
 Identities = 8/20 (40%), Positives = 9/20 (45%)
 Frame = +3

Query: 909 PSRKPPXXXRXPPXPXXGPP 968
           P+  PP     PP P  G P
Sbjct: 583 PAPPPPPPMGPPPSPLAGGP 602


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 25.4 bits (53), Expect = 2.7
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = -3

Query: 851 GGXGXGDTGGXXEGGXXPGG 792
           GG G G +GG   GG   GG
Sbjct: 853 GGAGGGSSGGGGSGGTSGGG 872


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 25.4 bits (53), Expect = 2.7
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = -1

Query: 568 GIPXVRGDGRDSRPLXELIPGRXXXNGXRGR 476
           G+    GD ++ RP    +PGR    G  GR
Sbjct: 530 GVMGTPGDAKEGRPGAPGLPGRDGEKGEPGR 560



 Score = 24.6 bits (51), Expect = 4.8
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = +3

Query: 615 PXNPXXKGPRLXXGPXXPXGL 677
           P  P  KGPR   GP  P G+
Sbjct: 410 PGAPGPKGPRGYEGPQGPKGM 430


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 25.4 bits (53), Expect = 2.7
 Identities = 21/65 (32%), Positives = 21/65 (32%)
 Frame = -3

Query: 974 GGGGXXXGXGRXPXXAGXFXGXGXRXXPXXXXXXXXXXPXKGGXGXGDTGGXXEGGXXPG 795
           GGGG   G G     AG F                      GG G G  GG   GG   G
Sbjct: 168 GGGGGGGGGG----GAGSFAAALRNLAKQADVKEDEPGAGGGGSGGGAPGG---GGGSSG 220

Query: 794 GEXPG 780
           G  PG
Sbjct: 221 GPGPG 225


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 25.4 bits (53), Expect = 2.7
 Identities = 19/61 (31%), Positives = 23/61 (37%), Gaps = 7/61 (11%)
 Frame = +3

Query: 606 PXGPX-NPXXKGPRLXXGPXXPXGLXPPPXNXAFP------QTXGPXPTPXRVXPXPXPX 764
           P GP  NP  +GP+   G     G    P +  +P       T GP   P  V P   P 
Sbjct: 105 PPGPKGNPGLRGPKGERGGMGDRGDPGLPGSLGYPGEKGDLGTPGPPGYPGDVGPKGEPG 164

Query: 765 P 767
           P
Sbjct: 165 P 165


>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 25.0 bits (52), Expect = 3.6
 Identities = 16/44 (36%), Positives = 16/44 (36%)
 Frame = -3

Query: 851 GGXGXGDTGGXXEGGXXPGGEXPGXXFYRXRXGXXXHPXRGWGG 720
           GG G GD G    G    GG   G    R R G       G GG
Sbjct: 55  GGYGGGDDGYGGGGRGGRGGRGGGRGRGRGRGGRDGGGGFGGGG 98


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 622,274
Number of Sequences: 2352
Number of extensions: 8786
Number of successful extensions: 33
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 563,979
effective HSP length: 65
effective length of database: 411,099
effective search space used: 111818928
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)