Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_C10
         (871 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.          26   0.39 
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    26   0.52 
L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.          24   1.6  
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    23   4.8  

>L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.
          Length = 149

 Score = 26.2 bits (55), Expect = 0.39
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = -1

Query: 613 IFILVLTKLNLAQKKILKNLVNKKHVVFQN 524
           ++I  LTKLN A ++    L N+K VVF +
Sbjct: 93  VYIEQLTKLNNAVEEKRPELTNRKSVVFHH 122


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 25.8 bits (54), Expect = 0.52
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = -1

Query: 613 IFILVLTKLNLAQKKILKNLVNKKHVVFQN 524
           ++I  LTKLN A ++    L N+K VVF +
Sbjct: 215 VYIEQLTKLNNAVEEKRPELTNRKGVVFHH 244


>L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.
          Length = 150

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = -1

Query: 613 IFILVLTKLNLAQKKILKNLVNKKHVVFQN 524
           ++I  LTKLN A ++    L N+K VVF +
Sbjct: 94  VYIEHLTKLNNAIEEKRFELTNRKGVVFHH 123


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 22.6 bits (46), Expect = 4.8
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = -2

Query: 120 LGNTSVILISSNTLLETKNINAXVNLKE 37
           +G+TS+   + N LL+ +NI      KE
Sbjct: 320 VGDTSLACWNENRLLDRRNIEVVAKNKE 347


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 203,147
Number of Sequences: 438
Number of extensions: 4212
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28159464
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)