Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_C09
         (902 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_01_0545 - 4756266-4757510                                           31   1.3  
04_04_0149 - 23123020-23123034,23123100-23123143,23123916-231239...    30   2.2  
07_01_1201 - 11419851-11419913,11420090-11420311                       29   5.1  
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095...    28   8.8  
10_02_0192 + 6517985-6518348,6518647-6518699,6519984-6520021,652...    28   8.8  
02_01_0300 + 2007414-2007665,2009268-2009320,2009409-2009453,200...    28   8.8  

>05_01_0545 - 4756266-4757510
          Length = 414

 Score = 31.1 bits (67), Expect = 1.3
 Identities = 26/87 (29%), Positives = 31/87 (35%), Gaps = 6/87 (6%)
 Frame = +2

Query: 629 EAPSCALLFPTLXAYRXTCPP-----FSLREAWRFLIAHAVXISXPGCXXFAPSWAV-CT 790
           E PSCA + P     R  C P      + R+   F  A  V  +   C  F PS  +   
Sbjct: 328 EPPSCARVVPAADGDRRNCLPNRPYQRTPRQCAAFYAAPPVDCAAFQCKPFVPSPLLPPP 387

Query: 791 NPPVXPXPXGPYXGXNRXLXPPPXKXR 871
            PP  P P  P         PPP   R
Sbjct: 388 PPPAYPGPLPPVYPVPYASPPPPPLYR 414


>04_04_0149 -
           23123020-23123034,23123100-23123143,23123916-23123937,
           23124003-23124068,23125100-23125734,23125966-23126035,
           23126150-23126209
          Length = 303

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
 Frame = +1

Query: 469 EQKASKRPGTVKRPRCWRFSIGSA-PLTSITKIDAQVRGGETRQDYKD--TRRFPLGSSL 639
           E KAS  P T   P     ++ S  P     ++D + +GG+  +D ++    R  LGSS 
Sbjct: 63  EAKASTSP-TGTEPNAGSMTVPSPHPPLPRRRLDVRSKGGDPEEDREERGAARQELGSSY 121

Query: 640 VRSPVSDP 663
           + SPV  P
Sbjct: 122 LDSPVHSP 129


>07_01_1201 - 11419851-11419913,11420090-11420311
          Length = 94

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
 Frame = +3

Query: 534 LRPPDEHHKNRRSSQRWRN--PTGL*RYQAFPPGKLPRALSCFRPXP 668
           L PP          Q+WR+  PTG   + +FP G LP A    +P P
Sbjct: 13  LLPPPPPLPALPQGQQWRSTGPTGKLCFCSFPAGALPPAAGAGQPAP 59


>10_08_0940 -
           21708557-21708733,21709058-21709142,21709330-21709551,
           21710640-21710815,21711883-21711946,21712433-21712507,
           21715114-21715199,21715297-21716715
          Length = 767

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = +3

Query: 294 NESAN---ARGEAVCVLGALPLPRSLTRCAR 377
           +ESAN   AR EAV  +G +P+   L RC+R
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464


>10_02_0192 +
           6517985-6518348,6518647-6518699,6519984-6520021,
           6522332-6522717,6523752-6523822,6524620-6524732,
           6525019-6525337,6525576-6525886,6526493-6527069,
           6530483-6530538,6531643-6532126
          Length = 923

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 19/58 (32%), Positives = 21/58 (36%)
 Frame = -2

Query: 772 WSERXTPGX*DTYSVSYEKAPRFPKGERRTGXPVSGQGRKQESARGSFPGGNAWYLYS 599
           WS     G   T   +       P+G RR G    G GR    A    PG  AW L S
Sbjct: 167 WSGGDDRGGRSTSVAARAPGRHSPQGRRRVG--AIGDGRMAPFAASGSPGAQAWPLGS 222


>02_01_0300 +
           2007414-2007665,2009268-2009320,2009409-2009453,
           2009559-2009661
          Length = 150

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = -2

Query: 694 ERRTGXPVSGQGRKQESARGSFPGGNA 614
           ERR   PVSGQ ++Q+  R +  GG A
Sbjct: 30  ERRAARPVSGQQQQQQRRRPTDVGGGA 56


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,886,016
Number of Sequences: 37544
Number of extensions: 525923
Number of successful extensions: 1392
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1341
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1390
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2553813320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)