Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_C08
         (867 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           28   0.42 
AY146753-1|AAO12068.1|  311|Anopheles gambiae odorant-binding pr...    24   6.9  
AY146750-1|AAO12065.1|  311|Anopheles gambiae odorant-binding pr...    24   6.9  
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    23   9.1  

>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 27.9 bits (59), Expect = 0.42
 Identities = 14/53 (26%), Positives = 22/53 (41%)
 Frame = +2

Query: 176 EDSPTGEHFNITPNLFSNS*DPAKMSKMWPASQYSHTNTQPIKATNEHQNQQN 334
           +D PTG   N  PN+FS   +  +        Q  H + Q  +   +H  Q +
Sbjct: 612 DDFPTGPDPNFNPNIFSEDEEDQQHLLQQQQQQQQHQHHQAHQHQGQHHAQHH 664


>AY146753-1|AAO12068.1|  311|Anopheles gambiae odorant-binding
           protein AgamOBP34 protein.
          Length = 311

 Score = 23.8 bits (49), Expect = 6.9
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = -3

Query: 367 RNCRGHAQGLQILLVLVFI 311
           +NC G ++GL+ LL  VF+
Sbjct: 265 QNCFGESRGLEYLLHTVFV 283


>AY146750-1|AAO12065.1|  311|Anopheles gambiae odorant-binding
           protein AgamOBP37 protein.
          Length = 311

 Score = 23.8 bits (49), Expect = 6.9
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = -3

Query: 367 RNCRGHAQGLQILLVLVFI 311
           +NC G ++GL+ LL  VF+
Sbjct: 265 QNCFGESRGLEYLLHTVFV 283


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 23.4 bits (48), Expect = 9.1
 Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
 Frame = +2

Query: 284 TNTQPIKATN-EHQNQQNLKTLGMTSAISTAGP-KPID--IEKTNDLKVS 421
           T + PI+    + Q QQN         ISTAGP  P D  IE+ N L ++
Sbjct: 687 TRSPPIELHELQQQQQQNGGPTATIMMISTAGPHHPHDLLIEENNMLNMT 736


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 821,457
Number of Sequences: 2352
Number of extensions: 17581
Number of successful extensions: 47
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 47
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 92613024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)