Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP10_F_C08
(867 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC036014-1|AAH36014.1| 745|Homo sapiens poly(A) polymerase alph... 215 2e-55
BC000927-1|AAH00927.1| 285|Homo sapiens PAPOLA protein protein. 215 2e-55
BC113747-1|AAI13748.1| 736|Homo sapiens poly(A) polymerase gamm... 212 1e-54
BC111701-1|AAI11702.1| 736|Homo sapiens poly(A) polymerase gamm... 212 1e-54
BC110906-1|AAI10907.1| 506|Homo sapiens PAPOLG protein protein. 212 1e-54
BC016738-1|AAH16738.1| 496|Homo sapiens Unknown (protein for IM... 212 1e-54
AK023544-1|BAB14604.1| 675|Homo sapiens protein ( Homo sapiens ... 212 1e-54
AK021867-1|BAB13919.1| 501|Homo sapiens protein ( Homo sapiens ... 212 1e-54
AJ308101-1|CAC59751.1| 736|Homo sapiens poly(A) polymerase gamm... 212 1e-54
AF312211-1|AAK83701.1| 736|Homo sapiens neo-poly(A) polymerase ... 212 1e-54
AC012498-1|AAY14832.1| 465|Homo sapiens unknown protein. 212 1e-54
AY029162-1|AAK31791.1| 736|Homo sapiens SRP RNA 3' adenylating ... 210 4e-54
AF218840-1|AAF81013.1| 636|Homo sapiens testis-specific poly(A)... 194 3e-49
AC092610-3|AAS07561.1| 636|Homo sapiens unknown protein. 194 3e-49
AB284524-1|BAF41975.1| 637|Homo sapiens testis-specific poly(A)... 194 3e-49
BC036653-1|AAH36653.2| 637|Homo sapiens poly(A) polymerase beta... 194 5e-49
AJ426365-1|CAD32490.1| 101|Homo sapiens immunoglobulin lambda l... 31 4.1
DQ172572-1|ABA70877.1| 127|Homo sapiens immunoglobulin lambda l... 31 7.2
AY279352-1|AAQ62849.1| 197|Homo sapiens truncated zinc finger p... 31 7.2
BC022846-1|AAH22846.1| 510|Homo sapiens zinc finger and SCAN do... 30 9.5
AY280799-1|AAQ16303.1| 510|Homo sapiens zinc finger protein 447... 30 9.5
AK160376-1|BAD18719.1| 267|Homo sapiens FLJ00320 protein protein. 30 9.5
AK022957-1|BAB14332.1| 510|Homo sapiens protein ( Homo sapiens ... 30 9.5
>BC036014-1|AAH36014.1| 745|Homo sapiens poly(A) polymerase alpha
protein.
Length = 745
Score = 215 bits (524), Expect = 2e-55
Identities = 105/187 (56%), Positives = 127/187 (67%)
Frame = +2
Query: 296 PIKATNEHQNQQNLKTLGMTSAISTAGPKPIDIEKTNDLKVSLTPFGVFESEAEMHHRME 475
P+ Q Q K G+TS IS A PK D T L +L PFGVFE E E+ R+
Sbjct: 4 PVTTQGSQQTQPPQKHYGITSPISLAAPKETDCVLTQKLIETLKPFGVFEEEEELQRRIL 63
Query: 476 VLGALHRLVRQWIRDESLRKNMPPSVADTVGGNIYTFGSYRLGVHHRGADIDALCVAPRH 655
+LG L+ LV++WIR+ S KN+P SV + VGG I+TFGSYRLGVH +GADIDALCVAPRH
Sbjct: 64 ILGKLNNLVKEWIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRH 123
Query: 656 IERCDYFLTFYDLLKQQPQVKDLRXVEXAFVPVIKMNFDGIEIDLLFXRXPXXEIXDSFD 835
++R D+F +FYD LK Q +VKDLR VE AFVPVIK+ FDGIEID+LF R I + D
Sbjct: 124 VDRSDFFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLD 183
Query: 836 LXDXMLL 856
L D LL
Sbjct: 184 LRDDSLL 190
>BC000927-1|AAH00927.1| 285|Homo sapiens PAPOLA protein protein.
Length = 285
Score = 215 bits (524), Expect = 2e-55
Identities = 105/187 (56%), Positives = 127/187 (67%)
Frame = +2
Query: 296 PIKATNEHQNQQNLKTLGMTSAISTAGPKPIDIEKTNDLKVSLTPFGVFESEAEMHHRME 475
P+ Q Q K G+TS IS A PK D T L +L PFGVFE E E+ R+
Sbjct: 4 PVTTQGSQQTQPPQKHYGITSPISLAAPKETDCVLTQKLIETLKPFGVFEEEEELQRRIL 63
Query: 476 VLGALHRLVRQWIRDESLRKNMPPSVADTVGGNIYTFGSYRLGVHHRGADIDALCVAPRH 655
+LG L+ LV++WIR+ S KN+P SV + VGG I+TFGSYRLGVH +GADIDALCVAPRH
Sbjct: 64 ILGKLNNLVKEWIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRH 123
Query: 656 IERCDYFLTFYDLLKQQPQVKDLRXVEXAFVPVIKMNFDGIEIDLLFXRXPXXEIXDSFD 835
++R D+F +FYD LK Q +VKDLR VE AFVPVIK+ FDGIEID+LF R I + D
Sbjct: 124 VDRSDFFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLD 183
Query: 836 LXDXMLL 856
L D LL
Sbjct: 184 LRDDSLL 190
>BC113747-1|AAI13748.1| 736|Homo sapiens poly(A) polymerase gamma
protein.
Length = 736
Score = 212 bits (518), Expect = 1e-54
Identities = 102/174 (58%), Positives = 126/174 (72%)
Frame = +2
Query: 323 NQQNLKTLGMTSAISTAGPKPIDIEKTNDLKVSLTPFGVFESEAEMHHRMEVLGALHRLV 502
+Q+ K G+TS IS A PK ID T L ++ PFGVFE E E++HR+ VLG L+ LV
Sbjct: 12 SQRQQKHYGITSPISLASPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLV 71
Query: 503 RQWIRDESLRKNMPPSVADTVGGNIYTFGSYRLGVHHRGADIDALCVAPRHIERCDYFLT 682
++WI D S KN+PPSV TVGG I+TFGSYRLGVH +GADIDALCVAPRH+ER D+F +
Sbjct: 72 KEWISDVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERSDFFQS 131
Query: 683 FYDLLKQQPQVKDLRXVEXAFVPVIKMNFDGIEIDLLFXRXPXXEIXDSFDLXD 844
F++ LK Q +++LR VE AFVPVIK FDGIEIDL+F R I D+ DL D
Sbjct: 132 FFEKLKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRD 185
>BC111701-1|AAI11702.1| 736|Homo sapiens poly(A) polymerase gamma
protein.
Length = 736
Score = 212 bits (518), Expect = 1e-54
Identities = 102/174 (58%), Positives = 126/174 (72%)
Frame = +2
Query: 323 NQQNLKTLGMTSAISTAGPKPIDIEKTNDLKVSLTPFGVFESEAEMHHRMEVLGALHRLV 502
+Q+ K G+TS IS A PK ID T L ++ PFGVFE E E++HR+ VLG L+ LV
Sbjct: 12 SQRQQKHYGITSPISLASPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLV 71
Query: 503 RQWIRDESLRKNMPPSVADTVGGNIYTFGSYRLGVHHRGADIDALCVAPRHIERCDYFLT 682
++WI D S KN+PPSV TVGG I+TFGSYRLGVH +GADIDALCVAPRH+ER D+F +
Sbjct: 72 KEWISDVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERSDFFQS 131
Query: 683 FYDLLKQQPQVKDLRXVEXAFVPVIKMNFDGIEIDLLFXRXPXXEIXDSFDLXD 844
F++ LK Q +++LR VE AFVPVIK FDGIEIDL+F R I D+ DL D
Sbjct: 132 FFEKLKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRD 185
>BC110906-1|AAI10907.1| 506|Homo sapiens PAPOLG protein protein.
Length = 506
Score = 212 bits (518), Expect = 1e-54
Identities = 102/174 (58%), Positives = 126/174 (72%)
Frame = +2
Query: 323 NQQNLKTLGMTSAISTAGPKPIDIEKTNDLKVSLTPFGVFESEAEMHHRMEVLGALHRLV 502
+Q+ K G+TS IS A PK ID T L ++ PFGVFE E E++HR+ VLG L+ LV
Sbjct: 12 SQRQQKHYGITSPISLASPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLV 71
Query: 503 RQWIRDESLRKNMPPSVADTVGGNIYTFGSYRLGVHHRGADIDALCVAPRHIERCDYFLT 682
++WI D S KN+PPSV TVGG I+TFGSYRLGVH +GADIDALCVAPRH+ER D+F +
Sbjct: 72 KEWISDVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERSDFFQS 131
Query: 683 FYDLLKQQPQVKDLRXVEXAFVPVIKMNFDGIEIDLLFXRXPXXEIXDSFDLXD 844
F++ LK Q +++LR VE AFVPVIK FDGIEIDL+F R I D+ DL D
Sbjct: 132 FFEKLKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRD 185
>BC016738-1|AAH16738.1| 496|Homo sapiens Unknown (protein for
IMAGE:4106370) protein.
Length = 496
Score = 212 bits (518), Expect = 1e-54
Identities = 102/174 (58%), Positives = 126/174 (72%)
Frame = +2
Query: 323 NQQNLKTLGMTSAISTAGPKPIDIEKTNDLKVSLTPFGVFESEAEMHHRMEVLGALHRLV 502
+Q+ K G+TS IS A PK ID T L ++ PFGVFE E E++HR+ VLG L+ LV
Sbjct: 12 SQRQQKHYGITSPISLASPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLV 71
Query: 503 RQWIRDESLRKNMPPSVADTVGGNIYTFGSYRLGVHHRGADIDALCVAPRHIERCDYFLT 682
++WI D S KN+PPSV TVGG I+TFGSYRLGVH +GADIDALCVAPRH+ER D+F +
Sbjct: 72 KEWISDVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERSDFFQS 131
Query: 683 FYDLLKQQPQVKDLRXVEXAFVPVIKMNFDGIEIDLLFXRXPXXEIXDSFDLXD 844
F++ LK Q +++LR VE AFVPVIK FDGIEIDL+F R I D+ DL D
Sbjct: 132 FFEKLKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRD 185
>AK023544-1|BAB14604.1| 675|Homo sapiens protein ( Homo sapiens
cDNA FLJ13482 fis, clone PLACE1003885, moderately
similar to POLY(A) POLYMERASE (EC 2.7.7.19). ).
Length = 675
Score = 212 bits (518), Expect = 1e-54
Identities = 102/174 (58%), Positives = 126/174 (72%)
Frame = +2
Query: 323 NQQNLKTLGMTSAISTAGPKPIDIEKTNDLKVSLTPFGVFESEAEMHHRMEVLGALHRLV 502
+Q+ K G+TS IS A PK ID T L ++ PFGVFE E E++HR+ VLG L+ LV
Sbjct: 9 SQRQQKHYGITSPISLASPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLV 68
Query: 503 RQWIRDESLRKNMPPSVADTVGGNIYTFGSYRLGVHHRGADIDALCVAPRHIERCDYFLT 682
++WI D S KN+PPSV TVGG I+TFGSYRLGVH +GADIDALCVAPRH+ER D+F +
Sbjct: 69 KEWISDVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERSDFFQS 128
Query: 683 FYDLLKQQPQVKDLRXVEXAFVPVIKMNFDGIEIDLLFXRXPXXEIXDSFDLXD 844
F++ LK Q +++LR VE AFVPVIK FDGIEIDL+F R I D+ DL D
Sbjct: 129 FFEKLKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRD 182
>AK021867-1|BAB13919.1| 501|Homo sapiens protein ( Homo sapiens
cDNA FLJ11805 fis, clone HEMBA1006278, moderately
similar to POLY(A) POLYMERASE (EC 2.7.7.19). ).
Length = 501
Score = 212 bits (518), Expect = 1e-54
Identities = 102/174 (58%), Positives = 126/174 (72%)
Frame = +2
Query: 323 NQQNLKTLGMTSAISTAGPKPIDIEKTNDLKVSLTPFGVFESEAEMHHRMEVLGALHRLV 502
+Q+ K G+TS IS A PK ID T L ++ PFGVFE E E++HR+ VLG L+ LV
Sbjct: 12 SQRQQKHYGITSPISLASPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLV 71
Query: 503 RQWIRDESLRKNMPPSVADTVGGNIYTFGSYRLGVHHRGADIDALCVAPRHIERCDYFLT 682
++WI D S KN+PPSV TVGG I+TFGSYRLGVH +GADIDALCVAPRH+ER D+F +
Sbjct: 72 KEWISDVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERSDFFQS 131
Query: 683 FYDLLKQQPQVKDLRXVEXAFVPVIKMNFDGIEIDLLFXRXPXXEIXDSFDLXD 844
F++ LK Q +++LR VE AFVPVIK FDGIEIDL+F R I D+ DL D
Sbjct: 132 FFEKLKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRD 185
>AJ308101-1|CAC59751.1| 736|Homo sapiens poly(A) polymerase gamma
protein.
Length = 736
Score = 212 bits (518), Expect = 1e-54
Identities = 102/174 (58%), Positives = 126/174 (72%)
Frame = +2
Query: 323 NQQNLKTLGMTSAISTAGPKPIDIEKTNDLKVSLTPFGVFESEAEMHHRMEVLGALHRLV 502
+Q+ K G+TS IS A PK ID T L ++ PFGVFE E E++HR+ VLG L+ LV
Sbjct: 12 SQRQQKHYGITSPISLASPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLV 71
Query: 503 RQWIRDESLRKNMPPSVADTVGGNIYTFGSYRLGVHHRGADIDALCVAPRHIERCDYFLT 682
++WI D S KN+PPSV TVGG I+TFGSYRLGVH +GADIDALCVAPRH+ER D+F +
Sbjct: 72 KEWISDVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERSDFFQS 131
Query: 683 FYDLLKQQPQVKDLRXVEXAFVPVIKMNFDGIEIDLLFXRXPXXEIXDSFDLXD 844
F++ LK Q +++LR VE AFVPVIK FDGIEIDL+F R I D+ DL D
Sbjct: 132 FFEKLKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRD 185
>AF312211-1|AAK83701.1| 736|Homo sapiens neo-poly(A) polymerase
protein.
Length = 736
Score = 212 bits (518), Expect = 1e-54
Identities = 102/174 (58%), Positives = 126/174 (72%)
Frame = +2
Query: 323 NQQNLKTLGMTSAISTAGPKPIDIEKTNDLKVSLTPFGVFESEAEMHHRMEVLGALHRLV 502
+Q+ K G+TS IS A PK ID T L ++ PFGVFE E E++HR+ VLG L+ LV
Sbjct: 12 SQRQQKHYGITSPISLASPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLV 71
Query: 503 RQWIRDESLRKNMPPSVADTVGGNIYTFGSYRLGVHHRGADIDALCVAPRHIERCDYFLT 682
++WI D S KN+PPSV TVGG I+TFGSYRLGVH +GADIDALCVAPRH+ER D+F +
Sbjct: 72 KEWISDVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERSDFFQS 131
Query: 683 FYDLLKQQPQVKDLRXVEXAFVPVIKMNFDGIEIDLLFXRXPXXEIXDSFDLXD 844
F++ LK Q +++LR VE AFVPVIK FDGIEIDL+F R I D+ DL D
Sbjct: 132 FFEKLKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRD 185
>AC012498-1|AAY14832.1| 465|Homo sapiens unknown protein.
Length = 465
Score = 212 bits (518), Expect = 1e-54
Identities = 102/174 (58%), Positives = 126/174 (72%)
Frame = +2
Query: 323 NQQNLKTLGMTSAISTAGPKPIDIEKTNDLKVSLTPFGVFESEAEMHHRMEVLGALHRLV 502
+Q+ K G+TS IS A PK ID T L ++ PFGVFE E E++HR+ VLG L+ LV
Sbjct: 12 SQRQQKHYGITSPISLASPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLV 71
Query: 503 RQWIRDESLRKNMPPSVADTVGGNIYTFGSYRLGVHHRGADIDALCVAPRHIERCDYFLT 682
++WI D S KN+PPSV TVGG I+TFGSYRLGVH +GADIDALCVAPRH+ER D+F +
Sbjct: 72 KEWISDVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERSDFFQS 131
Query: 683 FYDLLKQQPQVKDLRXVEXAFVPVIKMNFDGIEIDLLFXRXPXXEIXDSFDLXD 844
F++ LK Q +++LR VE AFVPVIK FDGIEIDL+F R I D+ DL D
Sbjct: 132 FFEKLKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRD 185
>AY029162-1|AAK31791.1| 736|Homo sapiens SRP RNA 3' adenylating
enzyme/pap2 protein.
Length = 736
Score = 210 bits (514), Expect = 4e-54
Identities = 101/174 (58%), Positives = 126/174 (72%)
Frame = +2
Query: 323 NQQNLKTLGMTSAISTAGPKPIDIEKTNDLKVSLTPFGVFESEAEMHHRMEVLGALHRLV 502
+Q+ K G+TS IS A P+ ID T L ++ PFGVFE E E++HR+ VLG L+ LV
Sbjct: 12 SQRQQKHYGITSPISLASPEEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLV 71
Query: 503 RQWIRDESLRKNMPPSVADTVGGNIYTFGSYRLGVHHRGADIDALCVAPRHIERCDYFLT 682
++WI D S KN+PPSV TVGG I+TFGSYRLGVH +GADIDALCVAPRH+ER D+F +
Sbjct: 72 KEWISDVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERSDFFQS 131
Query: 683 FYDLLKQQPQVKDLRXVEXAFVPVIKMNFDGIEIDLLFXRXPXXEIXDSFDLXD 844
F++ LK Q +++LR VE AFVPVIK FDGIEIDL+F R I D+ DL D
Sbjct: 132 FFEKLKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRD 185
>AF218840-1|AAF81013.1| 636|Homo sapiens testis-specific poly(A)
polymerase protein.
Length = 636
Score = 194 bits (474), Expect = 3e-49
Identities = 97/170 (57%), Positives = 119/170 (70%)
Frame = +2
Query: 347 GMTSAISTAGPKPIDIEKTNDLKVSLTPFGVFESEAEMHHRMEVLGALHRLVRQWIRDES 526
G++S IS A PK D T L +L PFGVFE E E+ R+ VL L+ LV++WIR+ S
Sbjct: 21 GVSSPISLAVPKETDCLLTQRLIETLRPFGVFEEEEELQRRILVLEKLNNLVKEWIREIS 80
Query: 527 LRKNMPPSVADTVGGNIYTFGSYRLGVHHRGADIDALCVAPRHIERCDYFLTFYDLLKQQ 706
K++P SV + VGG I+TFGSYRLGVH +GADIDALCVAP H++R D+F +FY LK Q
Sbjct: 81 ESKSLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPSHVDRSDFFTSFYAKLKLQ 140
Query: 707 PQVKDLRXVEXAFVPVIKMNFDGIEIDLLFXRXPXXEIXDSFDLXDXMLL 856
+VKDLR VE AFVPVIK+ FDGIEID+LF R I + DL D LL
Sbjct: 141 EEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLL 190
>AC092610-3|AAS07561.1| 636|Homo sapiens unknown protein.
Length = 636
Score = 194 bits (474), Expect = 3e-49
Identities = 97/170 (57%), Positives = 119/170 (70%)
Frame = +2
Query: 347 GMTSAISTAGPKPIDIEKTNDLKVSLTPFGVFESEAEMHHRMEVLGALHRLVRQWIRDES 526
G++S IS A PK D T L +L PFGVFE E E+ R+ VL L+ LV++WIR+ S
Sbjct: 21 GVSSPISLAVPKETDCLLTQRLIETLRPFGVFEEEEELQRRILVLEKLNNLVKEWIREIS 80
Query: 527 LRKNMPPSVADTVGGNIYTFGSYRLGVHHRGADIDALCVAPRHIERCDYFLTFYDLLKQQ 706
K++P SV + VGG I+TFGSYRLGVH +GADIDALCVAP H++R D+F +FY LK Q
Sbjct: 81 ESKSLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPSHVDRSDFFTSFYAKLKLQ 140
Query: 707 PQVKDLRXVEXAFVPVIKMNFDGIEIDLLFXRXPXXEIXDSFDLXDXMLL 856
+VKDLR VE AFVPVIK+ FDGIEID+LF R I + DL D LL
Sbjct: 141 EEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLL 190
>AB284524-1|BAF41975.1| 637|Homo sapiens testis-specific poly(A)
polymerase protein.
Length = 637
Score = 194 bits (474), Expect = 3e-49
Identities = 97/170 (57%), Positives = 119/170 (70%)
Frame = +2
Query: 347 GMTSAISTAGPKPIDIEKTNDLKVSLTPFGVFESEAEMHHRMEVLGALHRLVRQWIRDES 526
G++S IS A PK D T L +L PFGVFE E E+ R+ VL L+ LV++WIR+ S
Sbjct: 22 GVSSPISLAVPKETDCLLTQRLIETLRPFGVFEEEEELQRRILVLEKLNNLVKEWIREIS 81
Query: 527 LRKNMPPSVADTVGGNIYTFGSYRLGVHHRGADIDALCVAPRHIERCDYFLTFYDLLKQQ 706
K++P SV + VGG I+TFGSYRLGVH +GADIDALCVAP H++R D+F +FY LK Q
Sbjct: 82 ESKSLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPSHVDRSDFFTSFYAKLKLQ 141
Query: 707 PQVKDLRXVEXAFVPVIKMNFDGIEIDLLFXRXPXXEIXDSFDLXDXMLL 856
+VKDLR VE AFVPVIK+ FDGIEID+LF R I + DL D LL
Sbjct: 142 EEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLL 191
>BC036653-1|AAH36653.2| 637|Homo sapiens poly(A) polymerase beta
(testis specific) protein.
Length = 637
Score = 194 bits (472), Expect = 5e-49
Identities = 96/170 (56%), Positives = 119/170 (70%)
Frame = +2
Query: 347 GMTSAISTAGPKPIDIEKTNDLKVSLTPFGVFESEAEMHHRMEVLGALHRLVRQWIRDES 526
G++S IS A PK D T L +L PFGVFE E E+ R+ VL L+ LV++WIR+ S
Sbjct: 22 GVSSPISLAVPKETDCLLTQRLIETLRPFGVFEEEEELQRRILVLDKLNNLVKEWIREIS 81
Query: 527 LRKNMPPSVADTVGGNIYTFGSYRLGVHHRGADIDALCVAPRHIERCDYFLTFYDLLKQQ 706
K++P SV + VGG I+TFGSYRLGVH +GADIDALCVAP H++R D+F +FY LK Q
Sbjct: 82 ESKSLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPSHVDRSDFFTSFYAKLKLQ 141
Query: 707 PQVKDLRXVEXAFVPVIKMNFDGIEIDLLFXRXPXXEIXDSFDLXDXMLL 856
+VKDLR V+ AFVPVIK+ FDGIEID+LF R I + DL D LL
Sbjct: 142 EEVKDLRAVQEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLL 191
>AJ426365-1|CAD32490.1| 101|Homo sapiens immunoglobulin lambda
light chain variable region protein.
Length = 101
Score = 31.5 bits (68), Expect = 4.1
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = -1
Query: 189 VGESSIRTGDVLMNRNSNSTDSNFVSKENKRPQTDPT 79
V ES +T + RNS+S SN+V +RP + PT
Sbjct: 3 VSESPGKTVTISCTRNSDSAASNYVQGSQQRPGSSPT 39
>DQ172572-1|ABA70877.1| 127|Homo sapiens immunoglobulin lambda
light chain variable region protein.
Length = 127
Score = 30.7 bits (66), Expect = 7.2
Identities = 17/38 (44%), Positives = 20/38 (52%)
Frame = -1
Query: 189 VGESSIRTGDVLMNRNSNSTDSNFVSKENKRPQTDPTT 76
V ES +T + RNS S SNFV RP + PTT
Sbjct: 10 VSESPGKTVTISCTRNSGSIASNFVQWYQHRPGSCPTT 47
>AY279352-1|AAQ62849.1| 197|Homo sapiens truncated zinc finger
protein 447 isoform protein.
Length = 197
Score = 30.7 bits (66), Expect = 7.2
Identities = 22/69 (31%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Frame = +2
Query: 332 NLKTLGMTSAISTAGPKPIDIEKTNDLKVSLTPFGVFE-SEAEMHHRMEVLGALHRLVRQ 508
+L T G + + P+ I DL+ S F F EA H + L LH L RQ
Sbjct: 19 DLPTPGSAAGVQQEEPETIPERTPADLEFSRLRFREFVYQEAAGPH--QTLARLHELCRQ 76
Query: 509 WIRDESLRK 535
W+ E+ K
Sbjct: 77 WLMPEACSK 85
>BC022846-1|AAH22846.1| 510|Homo sapiens zinc finger and SCAN
domain containing 18 protein.
Length = 510
Score = 30.3 bits (65), Expect = 9.5
Identities = 22/69 (31%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Frame = +2
Query: 332 NLKTLGMTSAISTAGPKPIDIEKTNDLKVSLTPFGVFE-SEAEMHHRMEVLGALHRLVRQ 508
+L T G + + P+ I DL+ S F F EA H + L LH L RQ
Sbjct: 19 DLPTPGSAAGVQQEEPETIPERTPADLEFSRLRFREFVYQEAAGPH--QTLARLHELCRQ 76
Query: 509 WIRDESLRK 535
W+ E+ K
Sbjct: 77 WLMPEARSK 85
>AY280799-1|AAQ16303.1| 510|Homo sapiens zinc finger protein 447
protein.
Length = 510
Score = 30.3 bits (65), Expect = 9.5
Identities = 22/69 (31%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Frame = +2
Query: 332 NLKTLGMTSAISTAGPKPIDIEKTNDLKVSLTPFGVFE-SEAEMHHRMEVLGALHRLVRQ 508
+L T G + + P+ I DL+ S F F EA H + L LH L RQ
Sbjct: 19 DLPTPGSAAGVQQEEPETIPERTPADLEFSRLRFREFVYQEAAGPH--QTLARLHELCRQ 76
Query: 509 WIRDESLRK 535
W+ E+ K
Sbjct: 77 WLMPEARSK 85
>AK160376-1|BAD18719.1| 267|Homo sapiens FLJ00320 protein protein.
Length = 267
Score = 30.3 bits (65), Expect = 9.5
Identities = 22/69 (31%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Frame = +2
Query: 332 NLKTLGMTSAISTAGPKPIDIEKTNDLKVSLTPFGVFE-SEAEMHHRMEVLGALHRLVRQ 508
+L T G + + P+ I DL+ S F F EA H + L LH L RQ
Sbjct: 89 DLPTPGSAAGVQQEEPETIPERTPADLEFSRLRFREFVYQEAAGPH--QTLARLHELCRQ 146
Query: 509 WIRDESLRK 535
W+ E+ K
Sbjct: 147 WLMPEARSK 155
>AK022957-1|BAB14332.1| 510|Homo sapiens protein ( Homo sapiens
cDNA FLJ12895 fis, clone NT2RP2004187, weakly similar to
ZINC FINGER PROTEIN 38. ).
Length = 510
Score = 30.3 bits (65), Expect = 9.5
Identities = 22/69 (31%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Frame = +2
Query: 332 NLKTLGMTSAISTAGPKPIDIEKTNDLKVSLTPFGVFE-SEAEMHHRMEVLGALHRLVRQ 508
+L T G + + P+ I DL+ S F F EA H + L LH L RQ
Sbjct: 19 DLPTPGSAAGVQQEEPETIPERTPADLEFSRLRFREFVYQEAAGPH--QTLARLHELCRQ 76
Query: 509 WIRDESLRK 535
W+ E+ K
Sbjct: 77 WLMPEARSK 85
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,744,503
Number of Sequences: 237096
Number of extensions: 2363704
Number of successful extensions: 5246
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 4967
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5244
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 11095746082
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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