Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP10_F_C08
(867 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL021474-2|CAA16309.3| 655|Caenorhabditis elegans Hypothetical ... 159 2e-39
Z50070-12|CAA90398.2| 554|Caenorhabditis elegans Hypothetical p... 144 5e-35
AL032651-3|CAB60582.1| 554|Caenorhabditis elegans Hypothetical ... 144 5e-35
Z47356-6|CAA87419.1| 554|Caenorhabditis elegans Hypothetical pr... 144 1e-34
AL032623-12|CAA21517.1| 147|Caenorhabditis elegans Hypothetical... 31 1.1
U40800-6|AAA81492.1| 171|Caenorhabditis elegans Hypothetical pr... 30 2.5
AF099921-1|AAC68807.1| 1286|Caenorhabditis elegans Hypothetical ... 28 7.5
U59212-1|AAB09671.1| 428|Caenorhabditis elegans transmembrane p... 28 9.9
U39677-5|AAN71843.1| 383|Caenorhabditis elegans Innexin protein... 28 9.9
U39677-4|AAN71842.1| 428|Caenorhabditis elegans Innexin protein... 28 9.9
U23411-1|AAC46730.2| 231|Caenorhabditis elegans Hypothetical pr... 28 9.9
AF106591-2|AAC78238.1| 263|Caenorhabditis elegans Hypothetical ... 28 9.9
>AL021474-2|CAA16309.3| 655|Caenorhabditis elegans Hypothetical
protein Y32F6A.3 protein.
Length = 655
Score = 159 bits (387), Expect = 2e-39
Identities = 78/171 (45%), Positives = 109/171 (63%)
Frame = +2
Query: 344 LGMTSAISTAGPKPIDIEKTNDLKVSLTPFGVFESEAEMHHRMEVLGALHRLVRQWIRDE 523
LG++ IS A P DI +T L +L FG +E + E RMEVL L+RLV++W+++
Sbjct: 12 LGVSQPISLAHPDSKDIAQTTLLIETLKKFGSYEPKEETEQRMEVLRNLNRLVKEWVKNV 71
Query: 524 SLRKNMPPSVADTVGGNIYTFGSYRLGVHHRGADIDALCVAPRHIERCDYFLTFYDLLKQ 703
+ K +P GG ++TFGSYRLGVH GADID L V PRHI+R D+F +F ++L
Sbjct: 72 TAMK-IPNGEGVNAGGKLFTFGSYRLGVHSSGADIDTLAVVPRHIDRSDFFTSFKEMLNN 130
Query: 704 QPQVKDLRXVEXAFVPVIKMNFDGIEIDLLFXRXPXXEIXDSFDLXDXMLL 856
P V +L VE AFVPV+K+ + G+E+D+LF R E+ D+ +L D LL
Sbjct: 131 DPNVTELHGVEEAFVPVMKLKYSGVELDILFARLALKEVPDTQELSDDNLL 181
>Z50070-12|CAA90398.2| 554|Caenorhabditis elegans Hypothetical
protein F43G6.5 protein.
Length = 554
Score = 144 bits (350), Expect = 5e-35
Identities = 72/173 (41%), Positives = 102/173 (58%)
Frame = +2
Query: 338 KTLGMTSAISTAGPKPIDIEKTNDLKVSLTPFGVFESEAEMHHRMEVLGALHRLVRQWIR 517
+T G++ ISTA P D+E T+ L+ +L + +E + E R++VL L+ V+QWI+
Sbjct: 17 RTFGVSQPISTALPNAKDLELTSSLQKTLNQYNSYEPQEETSQRVKVLQKLNGCVKQWIQ 76
Query: 518 DESLRKNMPPSVADTVGGNIYTFGSYRLGVHHRGADIDALCVAPRHIERCDYFLTFYDLL 697
+ P GG + FGSYRLGVH GADID L +APRH R D+F +F +L
Sbjct: 77 -KITEARYPKDQLFNAGGQLMAFGSYRLGVHSSGADIDTLVLAPRHATRADFFSSFKQML 135
Query: 698 KQQPQVKDLRXVEXAFVPVIKMNFDGIEIDLLFXRXPXXEIXDSFDLXDXMLL 856
+ P+V +L VE AFVP++ M + GIEID LF R E+ + D+ D LL
Sbjct: 136 AKDPEVTNLCAVENAFVPIMTMKYSGIEIDFLFARLALKEVPEDLDILDDALL 188
>AL032651-3|CAB60582.1| 554|Caenorhabditis elegans Hypothetical
protein F43G6.5 protein.
Length = 554
Score = 144 bits (350), Expect = 5e-35
Identities = 72/173 (41%), Positives = 102/173 (58%)
Frame = +2
Query: 338 KTLGMTSAISTAGPKPIDIEKTNDLKVSLTPFGVFESEAEMHHRMEVLGALHRLVRQWIR 517
+T G++ ISTA P D+E T+ L+ +L + +E + E R++VL L+ V+QWI+
Sbjct: 17 RTFGVSQPISTALPNAKDLELTSSLQKTLNQYNSYEPQEETSQRVKVLQKLNGCVKQWIQ 76
Query: 518 DESLRKNMPPSVADTVGGNIYTFGSYRLGVHHRGADIDALCVAPRHIERCDYFLTFYDLL 697
+ P GG + FGSYRLGVH GADID L +APRH R D+F +F +L
Sbjct: 77 -KITEARYPKDQLFNAGGQLMAFGSYRLGVHSSGADIDTLVLAPRHATRADFFSSFKQML 135
Query: 698 KQQPQVKDLRXVEXAFVPVIKMNFDGIEIDLLFXRXPXXEIXDSFDLXDXMLL 856
+ P+V +L VE AFVP++ M + GIEID LF R E+ + D+ D LL
Sbjct: 136 AKDPEVTNLCAVENAFVPIMTMKYSGIEIDFLFARLALKEVPEDLDILDDALL 188
>Z47356-6|CAA87419.1| 554|Caenorhabditis elegans Hypothetical
protein T15H9.6 protein.
Length = 554
Score = 144 bits (348), Expect = 1e-34
Identities = 71/170 (41%), Positives = 106/170 (62%)
Frame = +2
Query: 347 GMTSAISTAGPKPIDIEKTNDLKVSLTPFGVFESEAEMHHRMEVLGALHRLVRQWIRDES 526
G++ ISTA PK D+ T+ L+ SL F FES+ E R++VL L LV+ W++ +
Sbjct: 15 GVSQPISTAFPKANDVALTSSLQSSLEEFKSFESKQETLLRIKVLKNLDGLVKDWVQKTT 74
Query: 527 LRKNMPPSVADTVGGNIYTFGSYRLGVHHRGADIDALCVAPRHIERCDYFLTFYDLLKQQ 706
+ + +P GG + FGSYRLGVH GADID++ VAPRHI R D+F +F D+L +
Sbjct: 75 ISR-IPKDQMFNAGGKLIPFGSYRLGVHSSGADIDSIVVAPRHITRSDFFNSFKDILAKN 133
Query: 707 PQVKDLRXVEXAFVPVIKMNFDGIEIDLLFXRXPXXEIXDSFDLXDXMLL 856
P+V +L VE AFVP++ + + G++ID+LF R + + ++ D LL
Sbjct: 134 PEVTELCAVEKAFVPIMTLKYSGVDIDILFARLALKSVPEDLNILDDSLL 183
>AL032623-12|CAA21517.1| 147|Caenorhabditis elegans Hypothetical
protein Y43F8B.12 protein.
Length = 147
Score = 31.1 bits (67), Expect = 1.1
Identities = 22/71 (30%), Positives = 35/71 (49%)
Frame = +2
Query: 221 FSNS*DPAKMSKMWPASQYSHTNTQPIKATNEHQNQQNLKTLGMTSAISTAGPKPIDIEK 400
F++S + K+SK W +Q HTN +K + Q LK++ + I K DI+
Sbjct: 54 FTDSTNSGKLSKAWAHAQNCHTNFYELKNMKKKLKQNILKSVSEMNNII----KKADIDM 109
Query: 401 TNDLKVSLTPF 433
N+ +L PF
Sbjct: 110 INN---NLKPF 117
>U40800-6|AAA81492.1| 171|Caenorhabditis elegans Hypothetical
protein D2096.6 protein.
Length = 171
Score = 29.9 bits (64), Expect = 2.5
Identities = 18/63 (28%), Positives = 30/63 (47%)
Frame = +2
Query: 185 PTGEHFNITPNLFSNS*DPAKMSKMWPASQYSHTNTQPIKATNEHQNQQNLKTLGMTSAI 364
P +N P + +N D AKM+ WPA+ S P+KA ++ + +G I
Sbjct: 103 PATPFYNYVPPVPANWPDVAKMTANWPAAAVS----VPVKARKPTKSDDEEEEVGKMGGI 158
Query: 365 STA 373
S++
Sbjct: 159 SSS 161
>AF099921-1|AAC68807.1| 1286|Caenorhabditis elegans Hypothetical
protein M01E10.2 protein.
Length = 1286
Score = 28.3 bits (60), Expect = 7.5
Identities = 13/47 (27%), Positives = 23/47 (48%)
Frame = -1
Query: 183 ESSIRTGDVLMNRNSNSTDSNFVSKENKRPQTDPTTFPPQRAKSNSN 43
ES++ + V+M ++ N +K + P P+TF P S+ N
Sbjct: 487 ESTVTSKPVIMFTTESTVVHNLPTKPSSAPTLHPSTFSPPLVTSSEN 533
>U59212-1|AAB09671.1| 428|Caenorhabditis elegans transmembrane
protein protein.
Length = 428
Score = 27.9 bits (59), Expect = 9.9
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -1
Query: 345 KVFRFCWFWCSFVAFIGWV 289
K+F F WFW VAF+ V
Sbjct: 274 KIFLFLWFWYFMVAFVSAV 292
>U39677-5|AAN71843.1| 383|Caenorhabditis elegans Innexin protein 1,
isoform b protein.
Length = 383
Score = 27.9 bits (59), Expect = 9.9
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -1
Query: 345 KVFRFCWFWCSFVAFIGWV 289
K+F F WFW VAF+ V
Sbjct: 274 KIFLFLWFWYFMVAFVSAV 292
>U39677-4|AAN71842.1| 428|Caenorhabditis elegans Innexin protein 1,
isoform a protein.
Length = 428
Score = 27.9 bits (59), Expect = 9.9
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -1
Query: 345 KVFRFCWFWCSFVAFIGWV 289
K+F F WFW VAF+ V
Sbjct: 274 KIFLFLWFWYFMVAFVSAV 292
>U23411-1|AAC46730.2| 231|Caenorhabditis elegans Hypothetical
protein T25E4.1 protein.
Length = 231
Score = 27.9 bits (59), Expect = 9.9
Identities = 14/48 (29%), Positives = 25/48 (52%)
Frame = +2
Query: 185 PTGEHFNITPNLFSNS*DPAKMSKMWPASQYSHTNTQPIKATNEHQNQ 328
P +N P + +N D A+M+ WPA+ + P+KA + +N+
Sbjct: 162 PATPFYNYVPPVPANWPDVARMTANWPAAAVA----MPLKARKQQKNE 205
>AF106591-2|AAC78238.1| 263|Caenorhabditis elegans Hypothetical
protein T01A4.2 protein.
Length = 263
Score = 27.9 bits (59), Expect = 9.9
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +1
Query: 82 WIRLRPFVLFGYKIRVSAVAVSVHQDITCSNRRF 183
WI ++F + +R+ V + H+ +T SNR+F
Sbjct: 2 WINSTRTLIFNHFVRIVLVLLLSHEVVTKSNRKF 35
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,901,190
Number of Sequences: 27780
Number of extensions: 382423
Number of successful extensions: 1199
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1108
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1195
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2171433726
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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