Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_C07
         (930 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0686 - 30900748-30902167,30903442-30904742                       31   1.7  
09_03_0145 - 12749288-12751510                                         30   2.3  
06_01_0486 - 3455030-3455770                                           30   2.3  
03_01_0515 - 3864796-3865425                                           30   2.3  
10_02_0157 - 5954439-5954801,5956244-5956270,5956465-5956526,595...    29   5.3  
04_03_0804 - 19844059-19844777,19844914-19844995,19846580-19846585     29   5.3  
12_02_0299 - 17051570-17052474,17053542-17053755                       29   7.0  
05_07_0332 - 29332520-29332818,29333511-29333725,29334380-293344...    28   9.2  

>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 13/30 (43%), Positives = 13/30 (43%)
 Frame = +3

Query: 756 PXXXPXEXPPLXPPXFXPPXPVXXGIPXPP 845
           P   P   PP  PP   PP P   G P PP
Sbjct: 328 PPPPPKAAPPPPPPKGPPPPPPAKGPPPPP 357


>09_03_0145 - 12749288-12751510
          Length = 740

 Score = 30.3 bits (65), Expect = 2.3
 Identities = 14/32 (43%), Positives = 15/32 (46%), Gaps = 3/32 (9%)
 Frame = +3

Query: 768 PXEXPPLXPPXFXPPXPVXXGIP---XPPFFP 854
           P   PP  PP   PP P   G+P    PP FP
Sbjct: 28  PSPPPPPPPPGIQPPPPALPGMPHGRPPPPFP 59


>06_01_0486 - 3455030-3455770
          Length = 246

 Score = 30.3 bits (65), Expect = 2.3
 Identities = 13/35 (37%), Positives = 14/35 (40%)
 Frame = +3

Query: 756 PXXXPXEXPPLXPPXFXPPXPVXXGIPXPPFFPXW 860
           P   P   PP  PP   PP P     P PP  P +
Sbjct: 101 PPYIPPPTPPYVPPYIPPPTPPYVPPPTPPSPPPY 135


>03_01_0515 - 3864796-3865425
          Length = 209

 Score = 30.3 bits (65), Expect = 2.3
 Identities = 13/30 (43%), Positives = 13/30 (43%)
 Frame = +3

Query: 756 PXXXPXEXPPLXPPXFXPPXPVXXGIPXPP 845
           P   P   PP  PP   PP PV    P PP
Sbjct: 91  PPPPPAASPPPPPPSPPPPSPVKSSPPPPP 120


>10_02_0157 -
           5954439-5954801,5956244-5956270,5956465-5956526,
           5956971-5957592
          Length = 357

 Score = 29.1 bits (62), Expect = 5.3
 Identities = 17/55 (30%), Positives = 18/55 (32%)
 Frame = +3

Query: 756 PXXXPXEXPPLXPPXFXPPXPVXXGIPXPPFFPXWXXXWAXXXXXPPXXXVFPXS 920
           P   P   PP   P   PP P    I  PP  P      A     PP   + P S
Sbjct: 63  PPLPPLTPPPAIVPPALPPPPPLPAIVVPPALPPTPAI-AVPPALPPIPAIVPPS 116


>04_03_0804 - 19844059-19844777,19844914-19844995,19846580-19846585
          Length = 268

 Score = 29.1 bits (62), Expect = 5.3
 Identities = 17/50 (34%), Positives = 19/50 (38%), Gaps = 1/50 (2%)
 Frame = +3

Query: 750 KXPXXXPXEXPPLXPPXFXPPXPVXXGIPXP-PFFPXWXXXWAXXXXXPP 896
           K P   P E PP  PP   PP P    +P P P    +   W      PP
Sbjct: 139 KPPPCKPEE-PPKPPPEKPPPKPECKLVPYPYPVPYPYAGQWCCPKPEPP 187


>12_02_0299 - 17051570-17052474,17053542-17053755
          Length = 372

 Score = 28.7 bits (61), Expect = 7.0
 Identities = 21/73 (28%), Positives = 22/73 (30%), Gaps = 1/73 (1%)
 Frame = +1

Query: 706 PXXFXGXXXPXXDFKNXXXFXPXKXPLXGPPXFXHPXP-FXXEYLXPXFSPFGXXGGPXX 882
           P  F     P   F       P   P   PP    P P F   +L P FSP      P  
Sbjct: 236 PPPFLPFPLPPIPFLTPPSPPPPAFPFPLPPWPWAPPPAFPFPHLPPIFSPPSPPPPPPP 295

Query: 883 LXPPPXXGFSPXP 921
             P P     P P
Sbjct: 296 AFPFPFPQLPPLP 308


>05_07_0332 - 29332520-29332818,29333511-29333725,29334380-29334408,
            29334956-29335045,29335120-29335155,29335222-29336553,
            29337331-29337497,29337519-29337724,29337815-29338036,
            29338332-29338381,29338754-29338870,29339471-29339551,
            29339656-29339694,29340464-29340636,29340769-29340826,
            29340934-29340987,29341066-29341613,29341695-29341755,
            29342180-29342260,29342448-29342630,29342908-29343162,
            29343304-29343423,29343497-29344901,29344988-29345085,
            29345164-29345218,29345307-29345366,29346498-29346697
          Length = 2077

 Score = 28.3 bits (60), Expect = 9.2
 Identities = 13/26 (50%), Positives = 14/26 (53%)
 Frame = +3

Query: 768  PXEXPPLXPPXFXPPXPVXXGIPXPP 845
            P + PP  PP   PP PV  G P PP
Sbjct: 1923 PKQPPPHAPPPPPPPPPV-EGKPKPP 1947


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,869,204
Number of Sequences: 37544
Number of extensions: 166542
Number of successful extensions: 760
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 428
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 660
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2659245980
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)