Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_C07
         (930 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC033786-1|AAH33786.2|  465|Homo sapiens ring finger protein 38 ...    31   6.0  
AL354935-3|CAO03541.1|  465|Homo sapiens ring finger protein 38 ...    31   6.0  
AL354935-2|CAO03540.1|  515|Homo sapiens ring finger protein 38 ...    31   6.0  
AL354935-1|CAH70194.1|  439|Homo sapiens ring finger protein 38 ...    31   6.0  
AL161792-4|CAO03554.1|  465|Homo sapiens ring finger protein 38 ...    31   6.0  
AL161792-3|CAO03553.1|  515|Homo sapiens ring finger protein 38 ...    31   6.0  
AL161792-1|CAI16895.1|  439|Homo sapiens ring finger protein 38 ...    31   6.0  
AK024996-1|BAB15050.1|  332|Homo sapiens protein ( Homo sapiens ...    31   6.0  
AF394047-1|AAM73697.1|  432|Homo sapiens RING finger protein 38 ...    31   6.0  

>BC033786-1|AAH33786.2|  465|Homo sapiens ring finger protein 38
           protein.
          Length = 465

 Score = 31.1 bits (67), Expect = 6.0
 Identities = 17/45 (37%), Positives = 18/45 (40%), Gaps = 4/45 (8%)
 Frame = +3

Query: 732 PXXGF*KXPXXXPXEXPPLXPPXFXPPXP----VXXGIPXPPFFP 854
           P  GF   P   P   PP  P  F    P    V  G+P PPF P
Sbjct: 270 PVGGFTYPPSAHPPTLPPSAPLQFLTHDPLHQEVSFGVPYPPFMP 314


>AL354935-3|CAO03541.1|  465|Homo sapiens ring finger protein 38
           protein.
          Length = 465

 Score = 31.1 bits (67), Expect = 6.0
 Identities = 17/45 (37%), Positives = 18/45 (40%), Gaps = 4/45 (8%)
 Frame = +3

Query: 732 PXXGF*KXPXXXPXEXPPLXPPXFXPPXP----VXXGIPXPPFFP 854
           P  GF   P   P   PP  P  F    P    V  G+P PPF P
Sbjct: 270 PVGGFTYPPSAHPPTLPPSAPLQFLTHDPLHQEVSFGVPYPPFMP 314


>AL354935-2|CAO03540.1|  515|Homo sapiens ring finger protein 38
           protein.
          Length = 515

 Score = 31.1 bits (67), Expect = 6.0
 Identities = 17/45 (37%), Positives = 18/45 (40%), Gaps = 4/45 (8%)
 Frame = +3

Query: 732 PXXGF*KXPXXXPXEXPPLXPPXFXPPXP----VXXGIPXPPFFP 854
           P  GF   P   P   PP  P  F    P    V  G+P PPF P
Sbjct: 320 PVGGFTYPPSAHPPTLPPSAPLQFLTHDPLHQEVSFGVPYPPFMP 364


>AL354935-1|CAH70194.1|  439|Homo sapiens ring finger protein 38
           protein.
          Length = 439

 Score = 31.1 bits (67), Expect = 6.0
 Identities = 17/45 (37%), Positives = 18/45 (40%), Gaps = 4/45 (8%)
 Frame = +3

Query: 732 PXXGF*KXPXXXPXEXPPLXPPXFXPPXP----VXXGIPXPPFFP 854
           P  GF   P   P   PP  P  F    P    V  G+P PPF P
Sbjct: 244 PVGGFTYPPSAHPPTLPPSAPLQFLTHDPLHQEVSFGVPYPPFMP 288


>AL161792-4|CAO03554.1|  465|Homo sapiens ring finger protein 38
           protein.
          Length = 465

 Score = 31.1 bits (67), Expect = 6.0
 Identities = 17/45 (37%), Positives = 18/45 (40%), Gaps = 4/45 (8%)
 Frame = +3

Query: 732 PXXGF*KXPXXXPXEXPPLXPPXFXPPXP----VXXGIPXPPFFP 854
           P  GF   P   P   PP  P  F    P    V  G+P PPF P
Sbjct: 270 PVGGFTYPPSAHPPTLPPSAPLQFLTHDPLHQEVSFGVPYPPFMP 314


>AL161792-3|CAO03553.1|  515|Homo sapiens ring finger protein 38
           protein.
          Length = 515

 Score = 31.1 bits (67), Expect = 6.0
 Identities = 17/45 (37%), Positives = 18/45 (40%), Gaps = 4/45 (8%)
 Frame = +3

Query: 732 PXXGF*KXPXXXPXEXPPLXPPXFXPPXP----VXXGIPXPPFFP 854
           P  GF   P   P   PP  P  F    P    V  G+P PPF P
Sbjct: 320 PVGGFTYPPSAHPPTLPPSAPLQFLTHDPLHQEVSFGVPYPPFMP 364


>AL161792-1|CAI16895.1|  439|Homo sapiens ring finger protein 38
           protein.
          Length = 439

 Score = 31.1 bits (67), Expect = 6.0
 Identities = 17/45 (37%), Positives = 18/45 (40%), Gaps = 4/45 (8%)
 Frame = +3

Query: 732 PXXGF*KXPXXXPXEXPPLXPPXFXPPXP----VXXGIPXPPFFP 854
           P  GF   P   P   PP  P  F    P    V  G+P PPF P
Sbjct: 244 PVGGFTYPPSAHPPTLPPSAPLQFLTHDPLHQEVSFGVPYPPFMP 288


>AK024996-1|BAB15050.1|  332|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ21343 fis, clone COL02679. ).
          Length = 332

 Score = 31.1 bits (67), Expect = 6.0
 Identities = 17/45 (37%), Positives = 18/45 (40%), Gaps = 4/45 (8%)
 Frame = +3

Query: 732 PXXGF*KXPXXXPXEXPPLXPPXFXPPXP----VXXGIPXPPFFP 854
           P  GF   P   P   PP  P  F    P    V  G+P PPF P
Sbjct: 137 PVGGFTYPPSAHPPTLPPSAPLQFLTHDPLHQEVSFGVPYPPFMP 181


>AF394047-1|AAM73697.1|  432|Homo sapiens RING finger protein 38
           protein.
          Length = 432

 Score = 31.1 bits (67), Expect = 6.0
 Identities = 17/45 (37%), Positives = 18/45 (40%), Gaps = 4/45 (8%)
 Frame = +3

Query: 732 PXXGF*KXPXXXPXEXPPLXPPXFXPPXP----VXXGIPXPPFFP 854
           P  GF   P   P   PP  P  F    P    V  G+P PPF P
Sbjct: 237 PVGGFTYPPSAHPPTLPPSAPLQFLTHDPLHQEVSFGVPYPPFMP 281


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,809,379
Number of Sequences: 237096
Number of extensions: 1009407
Number of successful extensions: 4295
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2117
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3755
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12158972418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)