Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_C06
         (916 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83128-1|CAB05635.1|   92|Caenorhabditis elegans Hypothetical pr...    96   3e-20
Z77131-1|CAB00854.1|   91|Caenorhabditis elegans Hypothetical pr...    90   2e-18

>Z83128-1|CAB05635.1|   92|Caenorhabditis elegans Hypothetical
           protein W01D2.1 protein.
          Length = 92

 Score = 96.3 bits (229), Expect = 3e-20
 Identities = 41/82 (50%), Positives = 53/82 (64%)
 Frame = +1

Query: 100 QASSKRRNKTHTLXRRCGRSSYHIQKSKCAXCGYPAAKLRSYHWSVKAXXXXXXXXXXMR 279
           QA  K+  K+HTL +RCG+SS+HIQK +CA CGYP AK R+Y+W  K+           R
Sbjct: 6   QAFGKKHVKSHTLCKRCGKSSFHIQKKRCASCGYPDAKKRTYNWGAKSIRRRTTGTGRTR 65

Query: 280 HLKIVRRRFRNGFKEGKPTPPK 345
           HL+ V  RFRNGF+EG    P+
Sbjct: 66  HLRDVNARFRNGFREGTTPKPR 87


>Z77131-1|CAB00854.1|   91|Caenorhabditis elegans Hypothetical
           protein C54C6.1 protein.
          Length = 91

 Score = 89.8 bits (213), Expect = 2e-18
 Identities = 39/80 (48%), Positives = 50/80 (62%)
 Frame = +1

Query: 100 QASSKRRNKTHTLXRRCGRSSYHIQKSKCAXCGYPAAKLRSYHWSVKAXXXXXXXXXXMR 279
           QA  K+  K+HTL +RCG+SS+HIQK +CA CGY  AK R+Y+W  K+           R
Sbjct: 6   QAFGKKHVKSHTLCKRCGKSSFHIQKKRCASCGYQDAKKRTYNWGAKSIRRRTTGTGRTR 65

Query: 280 HLKIVRRRFRNGFKEGKPTP 339
           HL+ V  RFRNGF+   P P
Sbjct: 66  HLRDVNARFRNGFRGTTPKP 85


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,533,837
Number of Sequences: 27780
Number of extensions: 174696
Number of successful extensions: 288
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 286
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 288
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2339274014
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)