Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_C05
         (903 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    25   0.94 
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    25   0.94 
DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    24   2.2  
DQ026034-1|AAY87893.1|  569|Apis mellifera nicotinic acetylcholi...    23   3.8  
DQ026033-1|AAY87892.1|  569|Apis mellifera nicotinic acetylcholi...    23   3.8  
X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor pro...    22   6.7  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    22   8.8  

>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 25.0 bits (52), Expect = 0.94
 Identities = 11/36 (30%), Positives = 20/36 (55%)
 Frame = -1

Query: 222 ELVSGFRQPCLQVVGIFDVNGHSWADKLKLKIISQF 115
           ++V+G R P    VG+F  +  SW ++ +   + QF
Sbjct: 152 KIVNGKRVPPTNWVGVFGGSAWSWREERQAYYLHQF 187


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 25.0 bits (52), Expect = 0.94
 Identities = 11/36 (30%), Positives = 20/36 (55%)
 Frame = -1

Query: 222 ELVSGFRQPCLQVVGIFDVNGHSWADKLKLKIISQF 115
           ++V+G R P    VG+F  +  SW ++ +   + QF
Sbjct: 152 KIVNGKRVPPTNWVGVFGGSAWSWREERQAYYLHQF 187


>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 23.8 bits (49), Expect = 2.2
 Identities = 8/14 (57%), Positives = 12/14 (85%)
 Frame = -1

Query: 246 GRHEVDHDELVSGF 205
           G H+VD DEL++G+
Sbjct: 122 GDHDVDKDELITGW 135


>DQ026034-1|AAY87893.1|  569|Apis mellifera nicotinic acetylcholine
           receptor alpha4subunit protein.
          Length = 569

 Score = 23.0 bits (47), Expect = 3.8
 Identities = 9/21 (42%), Positives = 16/21 (76%)
 Frame = -2

Query: 488 LVSIYLCLRIVVLSLSTLAPE 426
           LVSI +C+ +VVL++   +P+
Sbjct: 317 LVSISICVTVVVLNVHFRSPQ 337


>DQ026033-1|AAY87892.1|  569|Apis mellifera nicotinic acetylcholine
           receptor alpha4subunit protein.
          Length = 569

 Score = 23.0 bits (47), Expect = 3.8
 Identities = 9/21 (42%), Positives = 16/21 (76%)
 Frame = -2

Query: 488 LVSIYLCLRIVVLSLSTLAPE 426
           LVSI +C+ +VVL++   +P+
Sbjct: 317 LVSISICVTVVVLNVHFRSPQ 337


>X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor
           protein.
          Length = 168

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 10/25 (40%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
 Frame = +3

Query: 141 IYLPKNVHSHQRFRR-PEDKAGGSR 212
           +Y+P+    H R RR PE + G +R
Sbjct: 104 VYIPQPRPPHPRLRREPEAEPGNNR 128



 Score = 22.2 bits (45), Expect = 6.7
 Identities = 10/25 (40%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
 Frame = +3

Query: 141 IYLPKNVHSHQRFRR-PEDKAGGSR 212
           +Y+P+    H R RR PE + G +R
Sbjct: 130 VYIPQPRPPHPRLRREPEAEPGNNR 154


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 21.8 bits (44), Expect = 8.8
 Identities = 10/31 (32%), Positives = 14/31 (45%)
 Frame = +3

Query: 150 PKNVHSHQRFRRPEDKAGGSRRQARRDRLHG 242
           P  V   + FRR E     +  +A   R+HG
Sbjct: 589 PSTVEEREEFRRQERMRYAAPHKAFTYRMHG 619


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 198,482
Number of Sequences: 438
Number of extensions: 3585
Number of successful extensions: 13
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29267238
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)