Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP10_F_C04
(994 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 44 3e-05
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 44 4e-05
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 40 5e-04
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 37 0.005
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 35 0.020
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 32 0.14
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 31 0.19
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 29 1.3
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 29 1.3
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 28 1.8
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 44.4 bits (100), Expect = 3e-05
Identities = 38/137 (27%), Positives = 41/137 (29%)
Frame = +1
Query: 499 PXPXETXLAXXPPSXASXAPXXPRPPAPXGSXXAXXRPTQGARXXGXSPXXPRXXSPVXX 678
P P + A PP S AP R P P S A P P P +P
Sbjct: 352 PLPPQGRSAPPPPPPRS-APSTGRQPPPLSSSRAVSNPP------APPPAIPGRSAPALP 404
Query: 679 PXXAXHGXPXXXXTPXXXGPPXXPPSXPXRXRPXXXXAPPXRRXPPXPGGXXXPAPXPPP 858
P G TP PP PPS P P + P P P P P
Sbjct: 405 PL----GNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLP 460
Query: 859 HXPXRXPPXXXXPPLPP 909
PP P PP
Sbjct: 461 AGMPAAPPLPPAAPAPP 477
Score = 39.9 bits (89), Expect = 5e-04
Identities = 39/144 (27%), Positives = 42/144 (29%), Gaps = 7/144 (4%)
Frame = +1
Query: 499 PXPXETXLAXXPPSXASXAPXXPRPPAPXGSXXAXXRPTQGARXXGXSPXXPRXXSPVXX 678
P P P S P PP P S A P P PR +P
Sbjct: 315 PPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPR-SAP--- 370
Query: 679 PXXAXHGXPXXXXTPXXXGPPXXPPSXPXRXRPXXXXAPPXRR--XPPXPGGXXXPAPXP 852
P + PP PP+ P R P R PP P P P
Sbjct: 371 --STGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLP-PSA 427
Query: 853 PPHXPXRXPP-----XXXXPPLPP 909
PP P PP PPLPP
Sbjct: 428 PPSLPPSAPPSLPMGAPAAPPLPP 451
Score = 35.1 bits (77), Expect = 0.015
Identities = 28/124 (22%), Positives = 31/124 (25%), Gaps = 1/124 (0%)
Frame = +1
Query: 499 PXPXETXLAXXPPSXASXAPXXPRPPAPXGSXXAXXRPTQGARXXGXSPXXPRXXSPVXX 678
P P P S + PPAP + P P +P
Sbjct: 364 PPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSL 423
Query: 679 PXXAXHGXPXXXXTPXXXGPPXXPPSXPXR-XRPXXXXAPPXRRXPPXPGGXXXPAPXPP 855
P A P G P PP P P P P PAP P
Sbjct: 424 PPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPA 483
Query: 856 PHXP 867
P P
Sbjct: 484 PAAP 487
Score = 34.3 bits (75), Expect = 0.027
Identities = 33/139 (23%), Positives = 38/139 (27%), Gaps = 4/139 (2%)
Frame = +3
Query: 522 GXXXPLXRLPRSHXSQAPGPSRLXXXR----PPAHSRRXXXRVXPXXPAXXQPRXXTLXS 689
G P PRS S P L R PPA R P P +
Sbjct: 357 GRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPP 416
Query: 690 XARXTPXXXDXPXXGPPXXASFXPXAXPPPPXXGPARPXXXPPSXXVXXXRPXPXASXXX 869
P PP P P P P+ P P + P P A+
Sbjct: 417 VPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAP 476
Query: 870 PXSPPXXXAPPXXPXAPGP 926
P +P A P A P
Sbjct: 477 PPAPAPAPAAPVASIAELP 495
Score = 32.7 bits (71), Expect = 0.083
Identities = 26/84 (30%), Positives = 30/84 (35%), Gaps = 4/84 (4%)
Frame = +3
Query: 735 PPXXASFXPXAXPPPPXXGPARPXXXPPSXXVXXXRPXPXASXXXPXSPPXXXAPPXXP- 911
PP S + P PP A P P S +P P +S +PP PP P
Sbjct: 340 PPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPP--APPPAIPG 397
Query: 912 -XAPG--PXXXRXRQSXAPXXXPP 974
AP P R S P PP
Sbjct: 398 RSAPALPPLGNASRTSTPPVPTPP 421
Score = 31.9 bits (69), Expect = 0.14
Identities = 22/70 (31%), Positives = 25/70 (35%)
Frame = +3
Query: 765 AXPPPPXXGPARPXXXPPSXXVXXXRPXPXASXXXPXSPPXXXAPPXXPXAPGPXXXRXR 944
A P PP +RP PS P P S SPP +PP P AP
Sbjct: 229 APPIPPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPP--NSPP-RPIAPVSMNPAIN 285
Query: 945 QSXAPXXXPP 974
+ P PP
Sbjct: 286 STSKPPLPPP 295
Score = 31.9 bits (69), Expect = 0.14
Identities = 19/67 (28%), Positives = 21/67 (31%)
Frame = +3
Query: 771 PPPPXXGPARPXXXPPSXXVXXXRPXPXASXXXPXSPPXXXAPPXXPXAPGPXXXRXRQS 950
P PP P+ P PPS P A P +P P P AP
Sbjct: 418 PTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPP 477
Query: 951 XAPXXXP 971
AP P
Sbjct: 478 PAPAPAP 484
Score = 29.9 bits (64), Expect = 0.58
Identities = 23/72 (31%), Positives = 23/72 (31%), Gaps = 8/72 (11%)
Frame = +1
Query: 718 TPXXXGPPXXPPSXPXRXRP---XXXXAPPXRRXPPXPGGXXXPAPXPPPH--XPXRXPP 882
TP P PPS P P AP PP G P PP P P
Sbjct: 223 TPTSTSAPPIPPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNP 282
Query: 883 ---XXXXPPLPP 909
PPLPP
Sbjct: 283 AINSTSKPPLPP 294
Score = 29.1 bits (62), Expect = 1.0
Identities = 32/128 (25%), Positives = 40/128 (31%), Gaps = 2/128 (1%)
Frame = +1
Query: 535 PSXASXAPXXPRPPAPXGSXXAXXR-PTQGARXXGXSPXXPRXXSPVXXPXXAXHGXPXX 711
PS ++ AP P PP G+ + P + +P P P +
Sbjct: 246 PSLSAPAPP-PIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPLPPPSSRVSAAAL 304
Query: 712 XXTPXXXGPPXXPPSXPXRXRPXXXXAPPXRRXPPXPGGXXXPAPXPPPHXP-XRXPPXX 888
PP PPS R +P PP P A P P R P
Sbjct: 305 AANKKRP-PPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAP-- 361
Query: 889 XXPPLPPR 912
PP PPR
Sbjct: 362 --PPPPPR 367
Score = 26.6 bits (56), Expect = 5.4
Identities = 30/138 (21%), Positives = 37/138 (26%)
Frame = +1
Query: 505 PXETXLAXXPPSXASXAPXXPRPPAPXGSXXAXXRPTQGARXXGXSPXXPRXXSPVXXPX 684
P T PPS S P P + P+ G PR +PV
Sbjct: 224 PTSTSAPPIPPSIPSSRPPERVPSLSAPAPPPIPPPSNGT-VSSPPNSPPRPIAPVSMNP 282
Query: 685 XAXHGXPXXXXTPXXXGPPXXPPSXPXRXRPXXXXAPPXRRXPPXPGGXXXPAPXPPPHX 864
P + R P + R PP G + PPP
Sbjct: 283 AINSTSKPPLPPPSSRVSAAALAANKKRPPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPP 342
Query: 865 PXRXPPXXXXPPLPPRXR 918
P PLPP+ R
Sbjct: 343 PRSNAAGSI--PLPPQGR 358
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 43.6 bits (98), Expect = 4e-05
Identities = 43/153 (28%), Positives = 49/153 (32%), Gaps = 9/153 (5%)
Frame = +1
Query: 475 VSLPSXXGPXPXETXLAXXPPSXASXAPXXPRP----PAPXGSXXAXXRPTQGARXXGXS 642
V PS P P + A P + P P P P P S A P +
Sbjct: 1085 VPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSG-----A 1139
Query: 643 PXXPRXXSPVXXPXXAXHGXPXXXXTPXXXGPPXXPPSX--PXRXRPXXXX--APPXRRX 810
P P+ S P A G P P PP PS P +P PP
Sbjct: 1140 PPVPKP-SVAAPPVPAPSGAPPVPK-PSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEA 1197
Query: 811 PPXPGGXXXPAPXPPPHXPXRXP-PXXXXPPLP 906
PP P P PPP P P PP+P
Sbjct: 1198 PPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVP 1230
Score = 41.9 bits (94), Expect = 1e-04
Identities = 45/161 (27%), Positives = 53/161 (32%), Gaps = 16/161 (9%)
Frame = +1
Query: 475 VSLPSXXGPXPXETXLAXXPPSXASXAPXXPRP-PAPXGSXXAXXRPTQGARXXGXS--P 645
+ +PS P P T P S +S AP P P PAP + P+ S P
Sbjct: 1034 IPVPSTAPPVPIPTSTPPVPKS-SSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIP 1092
Query: 646 XXPRXX---SPVXXPXXAXHGXPXXXXTPXXX-----GPPXXPPSX-PXRXRPXXXXAP- 795
P+ PV P A P P PP PS P +P P
Sbjct: 1093 PVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPV 1152
Query: 796 --PXRRXP-PXPGGXXXPAPXPPPHXPXRXPPXXXXPPLPP 909
P P P P P P P P P PP+PP
Sbjct: 1153 PAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPP 1193
Score = 38.7 bits (86), Expect = 0.001
Identities = 35/147 (23%), Positives = 41/147 (27%), Gaps = 4/147 (2%)
Frame = +1
Query: 478 SLPSXXGPXPXETXLAXXP-PSXASXAPXXPRPPA--PXGSXXAXXRPTQGARXXGXSPX 648
S+P+ G P P P + AP P+P P + P
Sbjct: 1075 SIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVP 1134
Query: 649 XPRXXSPVXXPXXAXHGXPXXXXTPXXXGPPXXPPSXPXRXRPXXXXAPPXRRXPPXPG- 825
P PV P A P P P P P P PP P
Sbjct: 1135 VPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPP 1194
Query: 826 GXXXPAPXPPPHXPXRXPPXXXXPPLP 906
P P P P PP PP+P
Sbjct: 1195 SEAPPVPKPSVGVPP-VPPPSTAPPVP 1220
Score = 38.7 bits (86), Expect = 0.001
Identities = 38/151 (25%), Positives = 45/151 (29%), Gaps = 7/151 (4%)
Frame = +1
Query: 475 VSLPSXXGPXPXETXLAXXPPSXASXAPXXPRPP--APXGSXXAXXRPTQGARXXGXSPX 648
V PS P + +A P S AP P+P AP + P
Sbjct: 1094 VPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVP 1153
Query: 649 XPRXXSPVXXPXXAXHGXPXXXXTPXXXGPPXXPPSXPXRXRPXXXXAPPXRRX-----P 813
P PV P A P P PP P+ P APP + P
Sbjct: 1154 APSGAPPVPKPSVAAPPVP----APSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPP 1209
Query: 814 PXPGGXXXPAPXPPPHXPXRXPPXXXXPPLP 906
P P P P P P PP+P
Sbjct: 1210 VPPPSTAPPVPTPSAGLPPVPVPTAKAPPVP 1240
Score = 37.9 bits (84), Expect = 0.002
Identities = 40/148 (27%), Positives = 45/148 (30%), Gaps = 11/148 (7%)
Frame = +1
Query: 499 PXPXETXLAXXPPSXASXAPXXPR-PPAPXGSXXAXXRPTQGARXX-----GXSPXXPRX 660
P P + PS A P PP P S A P +P P+
Sbjct: 1067 PAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKP 1126
Query: 661 XSPVXXPXXAXHGXPXXXXTPXXXGPPXXPPSX-PXRXRPXXXXAP---PXRRXPPXPGG 828
S P G P P PP PS P +P P P PP P
Sbjct: 1127 -SVAAPPVPVPSGAPPVPK-PSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKP 1184
Query: 829 XXXPAPXPPPHXPXRXP-PXXXXPPLPP 909
P PPP P P PP+PP
Sbjct: 1185 AAGVPPVPPPSEAPPVPKPSVGVPPVPP 1212
Score = 36.3 bits (80), Expect = 0.007
Identities = 37/137 (27%), Positives = 38/137 (27%), Gaps = 1/137 (0%)
Frame = +1
Query: 499 PXPXETXLAXXPPSXASXAPXXPR-PPAPXGSXXAXXRPTQGARXXGXSPXXPRXXSPVX 675
P P PS A P PP P S A P P P
Sbjct: 1025 PLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGA-- 1082
Query: 676 XPXXAXHGXPXXXXTPXXXGPPXXPPSXPXRXRPXXXXAPPXRRXPPXPGGXXXPAPXPP 855
P A G P P PP PS P APP P P P P P
Sbjct: 1083 PPVPAPSGIPPVPK-PSVAAPPVPKPSVAVPPVPAPSGAPPV----PKPSVAAPPVPVPS 1137
Query: 856 PHXPXRXPPXXXXPPLP 906
P P PP+P
Sbjct: 1138 GAPPV-PKPSVAAPPVP 1153
Score = 33.1 bits (72), Expect = 0.062
Identities = 34/145 (23%), Positives = 39/145 (26%), Gaps = 4/145 (2%)
Frame = +1
Query: 475 VSLPSXXGPXPXETXLAXXPPSXASXAPXXPRPPAPXGSXXAXXRPTQGARXXGXSPXXP 654
V PS P P + +A P S AP P+P A + +P P
Sbjct: 1114 VPAPSGAPPVPKPS-VAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVP 1172
Query: 655 RXXS---PVXXPXXAXHGXPXXXXTPXXXGPPXXPPSXPXRXRPXXXXAPPXRRXP-PXP 822
S PV P P P P P P P P P P
Sbjct: 1173 APSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVP 1232
Query: 823 GGXXXPAPXPPPHXPXRXPPXXXXP 897
P P P P P P
Sbjct: 1233 TAKAPPVPAPSSEAPSVSTPRSSVP 1257
Score = 31.9 bits (69), Expect = 0.14
Identities = 20/65 (30%), Positives = 22/65 (33%), Gaps = 2/65 (3%)
Frame = +1
Query: 718 TPXXXGPPXXPPSXPXRXRPXXXXAPPXRRXPPXP--GGXXXPAPXPPPHXPXRXPPXXX 891
+P P PPS P A P R PP P P P P P P
Sbjct: 981 SPTSEPPKDHPPSAPLSKPVSTSPAAPLARVPPVPKLSSKAPPVPLPSADAPP-IPVPST 1039
Query: 892 XPPLP 906
PP+P
Sbjct: 1040 APPVP 1044
Score = 29.5 bits (63), Expect = 0.77
Identities = 20/68 (29%), Positives = 22/68 (32%)
Frame = +3
Query: 771 PPPPXXGPARPXXXPPSXXVXXXRPXPXASXXXPXSPPXXXAPPXXPXAPGPXXXRXRQS 950
PP P P PPS P P S P PP APP + G +
Sbjct: 1179 PPVPKPAAGVPPVPPPSEAP----PVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTA 1234
Query: 951 XAPXXXPP 974
AP P
Sbjct: 1235 KAPPVPAP 1242
Score = 29.1 bits (62), Expect = 1.0
Identities = 33/142 (23%), Positives = 39/142 (27%)
Frame = +3
Query: 546 LPRSHXSQAPGPSRLXXXRPPAHSRRXXXRVXPXXPAXXQPRXXTLXSXARXTPXXXDXP 725
LP S+ +P S PP+ P P P L S A P
Sbjct: 973 LPVSNILSSP-TSEPPKDHPPSAPLSKPVSTSPAAPLARVPPVPKLSSKAPPVPLPS--- 1028
Query: 726 XXGPPXXASFXPXAXPPPPXXGPARPXXXPPSXXVXXXRPXPXASXXXPXSPPXXXAPPX 905
PP P PP P P S P P S P P APP
Sbjct: 1029 ADAPPIPV---PSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPV 1085
Query: 906 XPXAPGPXXXRXRQSXAPXXXP 971
+ P + + P P
Sbjct: 1086 PAPSGIPPVPKPSVAAPPVPKP 1107
Score = 27.1 bits (57), Expect = 4.1
Identities = 34/156 (21%), Positives = 42/156 (26%), Gaps = 10/156 (6%)
Frame = +3
Query: 534 PLXRLPRSHXSQAPGPSRLXXXRPPAHSRRXXX--RVXPXXPAXXQPRXXTLXSXARXTP 707
P P+ H AP S+ P A R ++ P P T
Sbjct: 982 PTSEPPKDHPPSAP-LSKPVSTSPAAPLARVPPVPKLSSKAPPVPLPSADAPPIPVPSTA 1040
Query: 708 XXXDXPXXGPPXXASFXPXAXPPPPXXGPAR-------PXXXPPSXXVXXXRPXPXASXX 866
P PP S PPP P+ P PP P P S
Sbjct: 1041 PPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVA 1100
Query: 867 XPXSP-PXXXAPPXXPXAPGPXXXRXRQSXAPXXXP 971
P P P PP + P + + P P
Sbjct: 1101 APPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVP 1136
Score = 27.1 bits (57), Expect = 4.1
Identities = 23/86 (26%), Positives = 26/86 (30%), Gaps = 6/86 (6%)
Frame = +3
Query: 735 PPXXASFXPXAXPPPPXXGPARPXXXPPSXXVXXXRPX------PXASXXXPXSPPXXXA 896
PP A P PP P A P PS +P P S P P A
Sbjct: 1112 PPVPA---PSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAA 1168
Query: 897 PPXXPXAPGPXXXRXRQSXAPXXXPP 974
PP + G + P PP
Sbjct: 1169 PPVPAPSSGIPPVPKPAAGVPPVPPP 1194
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 39.9 bits (89), Expect = 5e-04
Identities = 39/145 (26%), Positives = 40/145 (27%), Gaps = 3/145 (2%)
Frame = +1
Query: 484 PSXXGPXPXETXLAXXPPSXASXAPXXPRPPAPX-GSXXAXXRPTQGARXXGXSPXXPRX 660
P P T P S + RP P G A P R G S
Sbjct: 67 PKSFAAPPVPTGAPSLPTSSNNTQQAEERPSMPALGGLFAGGMPK--LRHIGKSSASAAP 124
Query: 661 XSPVXXPXXAXHGXPXXXXTPXXXGPPXXPPSXPXRXRPXXXXAPPXRRXPPXPGGXXXP 840
S P P P PP P S P P APP P P P
Sbjct: 125 PSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAP----PIPSKAPPIPSSLPPPAQPAAP 180
Query: 841 APXPP--PHXPXRXPPXXXXPPLPP 909
PP P P PP P PP
Sbjct: 181 VKSPPSAPSLPSAVPPMPPKVPPPP 205
Score = 35.1 bits (77), Expect = 0.015
Identities = 21/66 (31%), Positives = 22/66 (33%), Gaps = 2/66 (3%)
Frame = +3
Query: 735 PPXXASFXPXAXPPPPXXGPARPXXXPPSXXVXXXRPXPXASXXXPXSPPXXXA--PPXX 908
PP A P PP P P P PP P A P S P + PP
Sbjct: 139 PPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMP 198
Query: 909 PXAPGP 926
P P P
Sbjct: 199 PKVPPP 204
Score = 30.3 bits (65), Expect = 0.44
Identities = 13/41 (31%), Positives = 15/41 (36%)
Frame = +1
Query: 790 APPXRRXPPXPGGXXXPAPXPPPHXPXRXPPXXXXPPLPPR 912
APP PP P P PP P PP+P +
Sbjct: 123 APPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSK 163
Score = 29.9 bits (64), Expect = 0.58
Identities = 21/62 (33%), Positives = 23/62 (37%)
Frame = +3
Query: 735 PPXXASFXPXAXPPPPXXGPARPXXXPPSXXVXXXRPXPXASXXXPXSPPXXXAPPXXPX 914
P A P + PP P RP PPS P P + P S P PP P
Sbjct: 125 PSAPAPPTPQSELRPPTSAPPRPSIPPPSP--ASAPPIPSKAPPIPSSLP----PPAQPA 178
Query: 915 AP 920
AP
Sbjct: 179 AP 180
Score = 29.5 bits (63), Expect = 0.77
Identities = 18/59 (30%), Positives = 19/59 (32%)
Frame = +3
Query: 723 PXXGPPXXASFXPXAXPPPPXXGPARPXXXPPSXXVXXXRPXPXASXXXPXSPPXXXAP 899
P PP + P PP PA P PPS P P PP AP
Sbjct: 154 PASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPP--PPLSQAP 210
Score = 29.5 bits (63), Expect = 0.77
Identities = 19/64 (29%), Positives = 21/64 (32%), Gaps = 4/64 (6%)
Frame = +3
Query: 723 PXXGPPXXASFXPXAXPPPPXXGP----ARPXXXPPSXXVXXXRPXPXASXXXPXSPPXX 890
P PP +S P A P P P + P PP P A S P
Sbjct: 161 PSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPPLSQAPVANTSSRPSS 220
Query: 891 XAPP 902
APP
Sbjct: 221 FAPP 224
Score = 27.5 bits (58), Expect = 3.1
Identities = 21/82 (25%), Positives = 26/82 (31%), Gaps = 4/82 (4%)
Frame = +3
Query: 693 ARXTPXXXDXPXXGPPXXASFXPXAX---PPPPXXGPARPXXXPPSXXVXXXRPXPXASX 863
A TP P P S P + PP P P P PP P ++
Sbjct: 129 APPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAP 188
Query: 864 XXPXS-PPXXXAPPXXPXAPGP 926
P + PP P P + P
Sbjct: 189 SLPSAVPPMPPKVPPPPLSQAP 210
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 36.7 bits (81), Expect = 0.005
Identities = 23/59 (38%), Positives = 23/59 (38%), Gaps = 1/59 (1%)
Frame = -3
Query: 911 RGGRGGX-XXXGGXRXGX*GGGXGAGXXXPPGXGGXRRXGGAXSXXGRXRXGXEGGXXG 738
RGGRGG GG G G G G G G GG R G R G GG G
Sbjct: 8 RGGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGG 66
Score = 27.1 bits (57), Expect = 4.1
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = -3
Query: 911 RGGRGGXXXXGGXRXGX*GGGXGA 840
RGGRGG G R G GG GA
Sbjct: 44 RGGRGGRGGARGGRGGSSGGRGGA 67
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 34.7 bits (76), Expect = 0.020
Identities = 23/59 (38%), Positives = 23/59 (38%)
Frame = -3
Query: 911 RGGRGGXXXXGGXRXGX*GGGXGAGXXXPPGXGGXRRXGGAXSXXGRXRXGXEGGXXGG 735
RGGRGG R G G G G G GG R G G R G GG GG
Sbjct: 137 RGGRGGF------RGGRGGSRGGFGGNSRGGFGGGSRGGFGGGSRGGSRGGFRGGSRGG 189
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 31.9 bits (69), Expect = 0.14
Identities = 21/59 (35%), Positives = 21/59 (35%)
Frame = +1
Query: 748 PPSXPXRXRPXXXXAPPXRRXPPXPGGXXXPAPXPPPHXPXRXPPXXXXPPLPPRXRXG 924
PP P P AP PP P P P PPP PP PP PP G
Sbjct: 733 PPPPPAVIVPTPAPAP-IPVPPPAPIMGGPPPPPPPPGVAGAGPP--PPPPPPPAVSAG 788
Score = 28.3 bits (60), Expect = 1.8
Identities = 14/46 (30%), Positives = 14/46 (30%)
Frame = +1
Query: 721 PXXXGPPXXPPSXPXRXRPXXXXAPPXRRXPPXPGGXXXPAPXPPP 858
P P P P PP PP G P P PPP
Sbjct: 737 PAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 27.1 bits (57), Expect = 4.1
Identities = 15/52 (28%), Positives = 15/52 (28%)
Frame = +3
Query: 771 PPPPXXGPARPXXXPPSXXVXXXRPXPXASXXXPXSPPXXXAPPXXPXAPGP 926
PPPP P P V P P P A P P P P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 26.2 bits (55), Expect = 7.2
Identities = 22/71 (30%), Positives = 22/71 (30%), Gaps = 4/71 (5%)
Frame = +1
Query: 652 PRXXSPVXXPXXAXHGXPXXXXTPXXXGPPXXPPSXPXRXRPXXXXAPPXRRXPPXP--- 822
P V P A P P GPP PP P A P PP P
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPP------PGVAGAGPPPPPPPPPAVS 786
Query: 823 -GGXXXPAPXP 852
GG AP P
Sbjct: 787 AGGSRYYAPAP 797
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 31.5 bits (68), Expect = 0.19
Identities = 18/59 (30%), Positives = 20/59 (33%), Gaps = 1/59 (1%)
Frame = +3
Query: 753 FXPXAXPPPPXXGPARPXXX-PPSXXVXXXRPXPXASXXXPXSPPXXXAPPXXPXAPGP 926
F A P P RP PP P P + P +PP PP P P P
Sbjct: 1678 FGGMAPAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
Score = 29.9 bits (64), Expect = 0.58
Identities = 17/57 (29%), Positives = 18/57 (31%)
Frame = +1
Query: 736 PPXXPPSXPXRXRPXXXXAPPXRRXPPXPGGXXXPAPXPPPHXPXRXPPXXXXPPLP 906
PP P S PP PP P P P PP P P P +P
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPPSA--PPMPAGPPSAPPPPLPASSAPSVP 1744
Score = 27.5 bits (58), Expect = 3.1
Identities = 20/73 (27%), Positives = 21/73 (28%)
Frame = +1
Query: 634 GXSPXXPRXXSPVXXPXXAXHGXPXXXXTPXXXGPPXXPPSXPXRXRPXXXXAPPXRRXP 813
G +P P PV A P P PP P P P PP P
Sbjct: 1680 GMAPAHPVSTPPVRPQSAA----PPQMSAPTPPPPPMSVPPPPSA--PPMPAGPPSAPPP 1733
Query: 814 PXPGGXXXPAPXP 852
P P P P
Sbjct: 1734 PLPASSAPSVPNP 1746
Score = 26.2 bits (55), Expect = 7.2
Identities = 15/56 (26%), Positives = 17/56 (30%)
Frame = +3
Query: 759 PXAXPPPPXXGPARPXXXPPSXXVXXXRPXPXASXXXPXSPPXXXAPPXXPXAPGP 926
P + PP P P PP V P P +PP P P P
Sbjct: 1694 PQSAAPPQMSAPTPP---PPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 28.7 bits (61), Expect = 1.3
Identities = 29/119 (24%), Positives = 32/119 (26%), Gaps = 3/119 (2%)
Frame = +1
Query: 532 PPSXASXAPXXP---RPPAPXGSXXAXXRPTQGARXXGXSPXXPRXXSPVXXPXXAXHGX 702
PPS A+ A P PP P A A R SP P
Sbjct: 173 PPSAAAPATSLPSDYNPPPPPPPPPAVEDQAADANEPDDYYSSGRAVSPEIPPTYTPK-- 230
Query: 703 PXXXXTPXXXGPPXXPPSXPXRXRPXXXXAPPXRRXPPXPGGXXXPAPXPPPHXPXRXP 879
P PP PP+ P + P R P P P P R P
Sbjct: 231 ---QADPLPAPPPPPPPTLPPQSTNTSQLPMPSRNVNNLGSQVNIPPPPATPSQPPRPP 286
Score = 25.8 bits (54), Expect = 9.5
Identities = 15/62 (24%), Positives = 18/62 (29%)
Frame = +3
Query: 735 PPXXASFXPXAXPPPPXXGPARPXXXPPSXXVXXXRPXPXASXXXPXSPPXXXAPPXXPX 914
P ++ P P P P P PP P P + S PP P
Sbjct: 221 PEIPPTYTPKQADPLPAPPPPPPPTLPPQSTNTSQLPMPSRNVNNLGSQVNIPPPPATPS 280
Query: 915 AP 920
P
Sbjct: 281 QP 282
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 28.7 bits (61), Expect = 1.3
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +1
Query: 844 PXPPPHXPXRXPPXXXXPPLPP 909
P PPP P PP PP PP
Sbjct: 9 PPPPPPPPGFEPPSQPPPPPPP 30
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 28.3 bits (60), Expect = 1.8
Identities = 17/42 (40%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Frame = -3
Query: 854 GGXGAG-XXXPPGXGGXRRXGGAXSXXGRXRXGXEGGXXGGP 732
GG G G PPG GG GG G GG GGP
Sbjct: 191 GGFGGGSGGPPPGPGGFGGFGGFGGEG--HHHGGHGGFGGGP 230
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,584,251
Number of Sequences: 5004
Number of extensions: 17485
Number of successful extensions: 250
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 136
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 513276802
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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