Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_C03
         (987 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    28   0.37 
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            27   0.86 
AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    26   2.0  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    26   2.0  
AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP prot...    24   8.1  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    24   8.1  

>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 28.3 bits (60), Expect = 0.37
 Identities = 17/53 (32%), Positives = 19/53 (35%)
 Frame = -2

Query: 341 GGGXXGGXXXDGXXKXAXGXXAPRXXGGAXXREXRXXGGPXAPXSGGXGGXGG 183
           GGG  GG    G    + G   P   GG   R+            GG GG GG
Sbjct: 203 GGGGSGGGAPGGGG-GSSGGPGPGGGGGGGGRDRDHRDRDREREGGGNGGGGG 254



 Score = 26.6 bits (56), Expect = 1.1
 Identities = 16/58 (27%), Positives = 17/58 (29%)
 Frame = -2

Query: 341 GGGXXGGXXXDGXXKXAXGXXAPRXXGGAXXREXRXXGGPXAPXSGGXGGXGGXXXXG 168
           GGG  GG    G              GG   R+ R           G GG GG    G
Sbjct: 204 GGGSGGGAPGGGGGSSGGPGPGGGGGGGGRDRDHRDRDREREGGGNGGGGGGGMQLDG 261



 Score = 24.2 bits (50), Expect = 6.1
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = -3

Query: 697 GGXGXXGKXPKKGGGAXXXPG 635
           GG G  G  P  GGG+   PG
Sbjct: 203 GGGGSGGGAPGGGGGSSGGPG 223


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 27.1 bits (57), Expect = 0.86
 Identities = 18/58 (31%), Positives = 18/58 (31%)
 Frame = +2

Query: 566 PXGPPGXGXXPGPSPXAXAXLXXPXXXXGAAPLFRXFPXXPPPPLXGXPXPARGPXXL 739
           P  PP     P PSP A   L  P       P    F    PP     P P   P  L
Sbjct: 583 PAPPPPPPMGPPPSPLAGGPLGGPAGSRPPLPNLLGFGGAAPPVTILVPYPIIIPLPL 640



 Score = 24.6 bits (51), Expect = 4.6
 Identities = 18/68 (26%), Positives = 20/68 (29%), Gaps = 6/68 (8%)
 Frame = +1

Query: 187 PXPPXPPXXGAXG------PPXXRXSRXXAPPXXRGAXXPXAXFXXPSXXXPPXXPPPTX 348
           P PP PP            PP     R    P         A F       PP  PPP  
Sbjct: 530 PPPPPPPGGAVLNIPPQFLPPPLNLLRAPFFPLNPAQLRFPAGFPNLPNAQPPPAPPPPP 589

Query: 349 SLXRLPAP 372
            +   P+P
Sbjct: 590 PMGPPPSP 597



 Score = 23.8 bits (49), Expect = 8.1
 Identities = 9/21 (42%), Positives = 9/21 (42%)
 Frame = +1

Query: 169 PXXXXPPXPPXPPXXGAXGPP 231
           P    PP PP PP  G    P
Sbjct: 577 PNAQPPPAPPPPPPMGPPPSP 597


>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 25.8 bits (54), Expect = 2.0
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -1

Query: 369 GGQPXKXGGXGRXXGRGG 316
           GG+  + GG GR  GRGG
Sbjct: 70  GGRGGRGGGRGRGRGRGG 87


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 25.8 bits (54), Expect = 2.0
 Identities = 17/58 (29%), Positives = 20/58 (34%), Gaps = 1/58 (1%)
 Frame = -1

Query: 735 QXGPRAGXGXPX-RGGGGXXGKXRKRGAAPXXXXGXXRXAXAXGEGPGXXPXPGGPXG 565
           Q G R   G    +G  G  G+  + G            A   GEG    P P GP G
Sbjct: 363 QKGDRGSEGLHGLKGQSGPKGEPGRDGIPGQPGIAGPAGAPGGGEGRPGAPGPKGPRG 420


>AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP
           protein.
          Length = 151

 Score = 23.8 bits (49), Expect = 8.1
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = -3

Query: 559 PPEXGXXGPPPXNGXPPRXG 500
           PP+     PPP    PPR G
Sbjct: 71  PPKPNISIPPPTMNMPPRPG 90


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 23.8 bits (49), Expect = 8.1
 Identities = 9/16 (56%), Positives = 9/16 (56%)
 Frame = +1

Query: 184 PPXPPXPPXXGAXGPP 231
           PP PP P   GA G P
Sbjct: 297 PPRPPMPMQGGAPGGP 312


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.312    0.146    0.508 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 565,019
Number of Sequences: 2352
Number of extensions: 10713
Number of successful extensions: 38
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 65
effective length of database: 411,099
effective search space used: 108119037
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)