Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP10_F_C03
(987 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 40 0.004
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 36 0.034
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 35 0.078
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 35 0.078
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 35 0.078
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 34 0.14
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 34 0.14
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 34 0.14
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 34 0.14
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 34 0.14
AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen prot... 34 0.14
Z81503-1|CAB04111.1| 305|Caenorhabditis elegans Hypothetical pr... 34 0.18
Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical pr... 34 0.18
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 33 0.24
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 33 0.41
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 33 0.41
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 33 0.41
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 32 0.55
Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical pr... 32 0.72
Z68507-1|CAA92826.1| 337|Caenorhabditis elegans Hypothetical pr... 32 0.72
V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein ( Caeno... 32 0.72
M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen ... 32 0.72
J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein ( C.ele... 32 0.72
X64435-1|CAA45773.1| 318|Caenorhabditis elegans collagen protein. 31 0.96
U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter... 31 0.96
U41624-3|AAF99944.1| 318|Caenorhabditis elegans Dumpy : shorter... 31 0.96
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 31 1.3
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 31 1.3
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 31 1.3
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 31 1.3
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 31 1.3
AC006743-4|AAF60502.1| 291|Caenorhabditis elegans Collagen prot... 31 1.3
Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical pr... 30 2.2
U64609-7|AAB04604.3| 373|Caenorhabditis elegans Sperm-specific ... 30 2.2
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 30 2.2
Z95621-2|CAB09131.1| 330|Caenorhabditis elegans Hypothetical pr... 30 2.9
Z78019-9|CAB01457.1| 330|Caenorhabditis elegans Hypothetical pr... 30 2.9
Z67738-4|CAJ43444.1| 279|Caenorhabditis elegans Hypothetical pr... 30 2.9
Z67738-3|CAA91544.2| 332|Caenorhabditis elegans Hypothetical pr... 30 2.9
AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical... 30 2.9
AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA topoisome... 30 2.9
AF047659-10|AAC04430.1| 798|Caenorhabditis elegans Hypothetical... 30 2.9
Z81592-1|CAB04725.1| 695|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical pr... 29 3.9
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 29 3.9
U55373-5|AAC25888.1| 289|Caenorhabditis elegans Collagen protei... 29 3.9
U40802-12|AAK19014.2| 265|Caenorhabditis elegans Sperm-specific... 29 3.9
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 29 3.9
Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical pr... 29 5.1
Z95559-1|CAB08999.1| 289|Caenorhabditis elegans Hypothetical pr... 29 5.1
Z74042-8|CAA98525.1| 299|Caenorhabditis elegans Hypothetical pr... 29 5.1
Z49131-6|CAA88979.1| 297|Caenorhabditis elegans Hypothetical pr... 29 5.1
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 29 5.1
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 29 5.1
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 29 5.1
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 29 5.1
AF022985-12|AAB69959.1| 319|Caenorhabditis elegans Collagen pro... 29 5.1
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 29 5.1
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 29 6.7
Z74036-2|CAA98487.1| 266|Caenorhabditis elegans Hypothetical pr... 29 6.7
Z74036-1|CAA98486.1| 299|Caenorhabditis elegans Hypothetical pr... 29 6.7
Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical pr... 29 6.7
U61948-2|AAB03143.2| 345|Caenorhabditis elegans Collagen protei... 29 6.7
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 29 6.7
M25480-1|AAA27986.1| 326|Caenorhabditis elegans collagen protein. 29 6.7
AF308860-1|AAG45416.1| 1475|Caenorhabditis elegans SOP-3 protein. 29 6.7
AF025467-5|AAB71038.2| 1115|Caenorhabditis elegans Hypothetical ... 29 6.7
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 29 6.7
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 29 6.7
AC024201-13|AAF36027.2| 1475|Caenorhabditis elegans Suppressor o... 29 6.7
Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical pr... 26 7.9
Z82268-5|CAB05195.1| 304|Caenorhabditis elegans Hypothetical pr... 28 8.9
Z81143-1|CAB03513.1| 381|Caenorhabditis elegans Hypothetical pr... 28 8.9
Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical pr... 28 8.9
Z70756-6|CAA94792.1| 290|Caenorhabditis elegans Hypothetical pr... 28 8.9
Z70756-4|CAA94788.1| 290|Caenorhabditis elegans Hypothetical pr... 28 8.9
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 28 8.9
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 28 8.9
U80444-7|AAO12447.1| 380|Caenorhabditis elegans Hypothetical pr... 28 8.9
U80444-5|AAB37791.1| 397|Caenorhabditis elegans Hypothetical pr... 28 8.9
U55373-4|ABR92605.1| 210|Caenorhabditis elegans Collagen protei... 28 8.9
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 28 8.9
U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical pr... 28 8.9
U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 28 8.9
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 28 8.9
AL132864-1|CAB63392.1| 613|Caenorhabditis elegans Hypothetical ... 28 8.9
AF067607-9|AAF98609.1| 460|Caenorhabditis elegans Collagen prot... 28 8.9
AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen pro... 28 8.9
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 28 8.9
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 39.5 bits (88), Expect = 0.004
Identities = 38/148 (25%), Positives = 44/148 (29%)
Frame = +1
Query: 184 PPXPPXPPXXGAXGPPXXRXSRXXAPPXXRGAXXPXAXFXXPSXXXPPXXPPPTXSLXRL 363
PP P G PP + + APP +GA P F P PP PP S
Sbjct: 296 PPPSGPPSEYGGYAPPQQQQQQFGAPPP-QGA--PQQGFGAPPQG-PPQGGPPQGSFGA- 350
Query: 364 PAPGXXXXXXSXPGGGGXXXXXGXXXSLAPXXGAXXXXXXXXXXXXXXXXXXXXXXXXXX 543
P P GG + AP +
Sbjct: 351 PPPQQFHAPSPQSFGGPPPPVSSAPGNFAPPPQSGPPGAFAPPPSAFGAPQGPGGPGGYG 410
Query: 544 XPPPGXVXGGXPGXRGXPRALPXGXGXP 627
PPPG G PG G P+ P G G P
Sbjct: 411 PPPPGGP--GAPGSYGPPQGGPGGFGPP 436
Score = 33.1 bits (72), Expect = 0.31
Identities = 26/71 (36%), Positives = 26/71 (36%)
Frame = +2
Query: 194 PXPPQXXGX*GXPPXGXPGGXLRXSPGXRXGXXRXFXXHXGPPRPXXRPXPPXFXGCPPX 373
P P G G PP G PG S G G F GPP P P G PP
Sbjct: 400 PQGPGGPGGYGPPPPGGPGAP--GSYGPPQGGPGGF----GPPPPGG----PGAYGPPPT 449
Query: 374 GXVXXGXPXPG 406
G G P PG
Sbjct: 450 GFPPVGAPPPG 460
Score = 30.7 bits (66), Expect = 1.7
Identities = 18/58 (31%), Positives = 20/58 (34%)
Frame = +1
Query: 169 PXXXXPPXPPXPPXXGAXGPPXXRXSRXXAPPXXRGAXXPXAXFXXPSXXXPPXXPPP 342
P PP P P G+ GPP PP P A P+ P PPP
Sbjct: 406 PGGYGPPPPGGPGAPGSYGPPQGGPGGFGPPP----PGGPGAYGPPPTGFPPVGAPPP 459
Score = 29.1 bits (62), Expect = 5.1
Identities = 21/74 (28%), Positives = 21/74 (28%), Gaps = 2/74 (2%)
Frame = +2
Query: 194 PXPP--QXXGX*GXPPXGXPGGXLRXSPGXRXGXXRXFXXHXGPPRPXXRPXPPXFXGCP 367
P PP G PP P G P P P P P G P
Sbjct: 367 PPPPVSSAPGNFAPPPQSGPPGAFAPPPSAFGAPQGPGGPGGYGPPPPGGPGAPGSYGPP 426
Query: 368 PXGXVXXGXPXPGG 409
G G P PGG
Sbjct: 427 QGGPGGFGPPPPGG 440
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 36.3 bits (80), Expect = 0.034
Identities = 20/58 (34%), Positives = 22/58 (37%)
Frame = +2
Query: 575 PPGXGXXPGPSPXAXAXLXXPXXXXGAAPLFRXFPXXPPPPLXGXPXPARGPXXLXAA 748
PPG G P P P + P G P PPPP+ G P P P L A
Sbjct: 77 PPGPGGIPPPPPMFAGGIPPPPPMMGGIP--------PPPPMFGAPPPPPPPSGLGVA 126
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 35.1 bits (77), Expect = 0.078
Identities = 19/56 (33%), Positives = 21/56 (37%)
Frame = -3
Query: 562 PPPEXGXXGPPPXNGXPPRXGGGXXGGGXKRXPXXXXGPKXXTXRXSXXDPPPRAG 395
PPP G PPP PP GG P P+ S PPP+AG
Sbjct: 265 PPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSL--PPPQAG 318
Score = 31.9 bits (69), Expect = 0.72
Identities = 24/84 (28%), Positives = 24/84 (28%), Gaps = 1/84 (1%)
Frame = +1
Query: 166 SPXXXXPPXPPXPPXXGAXGPPXXRXSRXXAPPXXRGAXXPXAXF-XXPSXXXPPXXPPP 342
SP PP PP A PP R PP P P PP PPP
Sbjct: 246 SPPLAGSGSPPPPP--AAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPP 303
Query: 343 TXSLXRLPAPGXXXXXXSXPGGGG 414
S P P G G
Sbjct: 304 RGSPPTGSLPPPQAGGSPPPAGTG 327
Score = 31.5 bits (68), Expect = 0.96
Identities = 25/73 (34%), Positives = 27/73 (36%)
Frame = +1
Query: 157 KXXSPXXXXPPXPPXPPXXGAXGPPXXRXSRXXAPPXXRGAXXPXAXFXXPSXXXPPXXP 336
K +P PP PP P G P S PP G+ P P PP P
Sbjct: 228 KRQAPPAGSPPPPPPPK-----GSPPLAGSGSPPPPPAAGSPPP------PRTGSPP--P 274
Query: 337 PPTXSLXRLPAPG 375
PPT S PA G
Sbjct: 275 PPTGSPPPPPAGG 287
Score = 30.7 bits (66), Expect = 1.7
Identities = 20/81 (24%), Positives = 21/81 (25%)
Frame = -3
Query: 562 PPPEXGXXGPPPXNGXPPRXGGGXXGGGXKRXPXXXXGPKXXTXRXSXXDPPPRAGXAXX 383
PPP G PP PP GG P K S P G
Sbjct: 297 PPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPPT 356
Query: 382 NXPXGRATGKXRXXGAARRAG 320
P GK + R G
Sbjct: 357 GRPPRGGPGKSSEESSESREG 377
Score = 29.1 bits (62), Expect = 5.1
Identities = 21/67 (31%), Positives = 21/67 (31%), Gaps = 9/67 (13%)
Frame = -3
Query: 568 RXPPPEXGXXGPPPXNGXPPRXGGG----XXGGGXKRXPXXXXGPKXXTXR-----XSXX 416
R PP PPP G PP G G G P P T
Sbjct: 229 RQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGS 288
Query: 415 DPPPRAG 395
PPPRAG
Sbjct: 289 PPPPRAG 295
Score = 28.7 bits (61), Expect = 6.7
Identities = 16/63 (25%), Positives = 18/63 (28%)
Frame = +1
Query: 184 PPXPPXPPXXGAXGPPXXRXSRXXAPPXXRGAXXPXAXFXXPSXXXPPXXPPPTXSLXRL 363
PP P P G P + PP G+ P P PPP
Sbjct: 240 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPP 299
Query: 364 PAP 372
P P
Sbjct: 300 PPP 302
Score = 28.7 bits (61), Expect = 6.7
Identities = 18/54 (33%), Positives = 19/54 (35%), Gaps = 4/54 (7%)
Frame = +2
Query: 563 SPXGPPGXGXXPGPS----PXAXAXLXXPXXXXGAAPLFRXFPXXPPPPLXGXP 712
SP PP G P P P P G+ P R PPPP G P
Sbjct: 254 SPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSP 307
Score = 28.7 bits (61), Expect = 6.7
Identities = 21/65 (32%), Positives = 24/65 (36%), Gaps = 4/65 (6%)
Frame = +1
Query: 169 PXXXXPPXPPXP---PXXGAXGPPXXRXSRXXAPPXXRGAXXPXAXFXXPS-XXXPPXXP 336
P PP PP P P G+ PP S PP G+ P + PP
Sbjct: 292 PRAGSPPPPPPPRGSPPTGSLPPPQAGGS---PPPAGTGSPPPPPRQKRQAPERSPPTGS 348
Query: 337 PPTXS 351
PPT S
Sbjct: 349 PPTGS 353
Score = 28.3 bits (60), Expect = 8.9
Identities = 23/71 (32%), Positives = 25/71 (35%), Gaps = 8/71 (11%)
Frame = -1
Query: 411 PPPGXGXPXXTXPXGGQ-------PXKXGGXGRXXGRGGPXWXXK-XRXXPXRXPGXXRS 256
PPP G P P G P + GG G G P + R P R P S
Sbjct: 290 PPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSP-PTGS 348
Query: 255 XPPGXPXGGXP 223
P G P G P
Sbjct: 349 PPTGSPPTGRP 359
Score = 27.9 bits (59), Expect(2) = 0.95
Identities = 17/53 (32%), Positives = 17/53 (32%)
Frame = +2
Query: 566 PXGPPGXGXXPGPSPXAXAXLXXPXXXXGAAPLFRXFPXXPPPPLXGXPXPAR 724
P G P P P A P P P PPPP G P P R
Sbjct: 243 PKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSP--PPPPAGGSPPPPR 293
Score = 26.6 bits (56), Expect(2) = 0.73
Identities = 19/60 (31%), Positives = 21/60 (35%), Gaps = 2/60 (3%)
Frame = +2
Query: 557 GXSPXGPPGXGXXPGPSPXAXAXLXX--PXXXXGAAPLFRXFPXXPPPPLXGXPXPARGP 730
G SP PP G P P P + P G +P PPPP P R P
Sbjct: 286 GGSPP-PPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSP 344
Score = 23.8 bits (49), Expect(2) = 0.73
Identities = 15/52 (28%), Positives = 15/52 (28%)
Frame = +2
Query: 317 PPRPXXRPXPPXFXGCPPXGXVXXGXPXPGGGVXRAXPXXXXLWPPAXXRXP 472
PP P P G PP P P G P PPA P
Sbjct: 239 PPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPP 290
Score = 22.2 bits (45), Expect(2) = 0.95
Identities = 9/26 (34%), Positives = 9/26 (34%)
Frame = +2
Query: 836 PXXPRLAGPXXXPPPXXXXGXRGXPP 913
P PR P PPP PP
Sbjct: 289 PPPPRAGSPPPPPPPRGSPPTGSLPP 314
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 35.1 bits (77), Expect = 0.078
Identities = 19/56 (33%), Positives = 21/56 (37%)
Frame = -3
Query: 562 PPPEXGXXGPPPXNGXPPRXGGGXXGGGXKRXPXXXXGPKXXTXRXSXXDPPPRAG 395
PPP G PPP PP GG P P+ S PPP+AG
Sbjct: 286 PPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSL--PPPQAG 339
Score = 31.9 bits (69), Expect = 0.72
Identities = 24/84 (28%), Positives = 24/84 (28%), Gaps = 1/84 (1%)
Frame = +1
Query: 166 SPXXXXPPXPPXPPXXGAXGPPXXRXSRXXAPPXXRGAXXPXAXF-XXPSXXXPPXXPPP 342
SP PP PP A PP R PP P P PP PPP
Sbjct: 267 SPPLAGSGSPPPPP--AAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPP 324
Query: 343 TXSLXRLPAPGXXXXXXSXPGGGG 414
S P P G G
Sbjct: 325 RGSPPTGSLPPPQAGGSPPPAGTG 348
Score = 31.5 bits (68), Expect = 0.96
Identities = 25/73 (34%), Positives = 27/73 (36%)
Frame = +1
Query: 157 KXXSPXXXXPPXPPXPPXXGAXGPPXXRXSRXXAPPXXRGAXXPXAXFXXPSXXXPPXXP 336
K +P PP PP P G P S PP G+ P P PP P
Sbjct: 249 KRQAPPAGSPPPPPPPK-----GSPPLAGSGSPPPPPAAGSPPP------PRTGSPP--P 295
Query: 337 PPTXSLXRLPAPG 375
PPT S PA G
Sbjct: 296 PPTGSPPPPPAGG 308
Score = 30.7 bits (66), Expect = 1.7
Identities = 20/81 (24%), Positives = 21/81 (25%)
Frame = -3
Query: 562 PPPEXGXXGPPPXNGXPPRXGGGXXGGGXKRXPXXXXGPKXXTXRXSXXDPPPRAGXAXX 383
PPP G PP PP GG P K S P G
Sbjct: 318 PPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPPT 377
Query: 382 NXPXGRATGKXRXXGAARRAG 320
P GK + R G
Sbjct: 378 GRPPRGGPGKSSEESSESREG 398
Score = 29.1 bits (62), Expect = 5.1
Identities = 21/67 (31%), Positives = 21/67 (31%), Gaps = 9/67 (13%)
Frame = -3
Query: 568 RXPPPEXGXXGPPPXNGXPPRXGGG----XXGGGXKRXPXXXXGPKXXTXR-----XSXX 416
R PP PPP G PP G G G P P T
Sbjct: 250 RQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGS 309
Query: 415 DPPPRAG 395
PPPRAG
Sbjct: 310 PPPPRAG 316
Score = 28.7 bits (61), Expect = 6.7
Identities = 16/63 (25%), Positives = 18/63 (28%)
Frame = +1
Query: 184 PPXPPXPPXXGAXGPPXXRXSRXXAPPXXRGAXXPXAXFXXPSXXXPPXXPPPTXSLXRL 363
PP P P G P + PP G+ P P PPP
Sbjct: 261 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPP 320
Query: 364 PAP 372
P P
Sbjct: 321 PPP 323
Score = 28.7 bits (61), Expect = 6.7
Identities = 18/54 (33%), Positives = 19/54 (35%), Gaps = 4/54 (7%)
Frame = +2
Query: 563 SPXGPPGXGXXPGPS----PXAXAXLXXPXXXXGAAPLFRXFPXXPPPPLXGXP 712
SP PP G P P P P G+ P R PPPP G P
Sbjct: 275 SPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSP 328
Score = 28.7 bits (61), Expect = 6.7
Identities = 21/65 (32%), Positives = 24/65 (36%), Gaps = 4/65 (6%)
Frame = +1
Query: 169 PXXXXPPXPPXP---PXXGAXGPPXXRXSRXXAPPXXRGAXXPXAXFXXPS-XXXPPXXP 336
P PP PP P P G+ PP S PP G+ P + PP
Sbjct: 313 PRAGSPPPPPPPRGSPPTGSLPPPQAGGS---PPPAGTGSPPPPPRQKRQAPERSPPTGS 369
Query: 337 PPTXS 351
PPT S
Sbjct: 370 PPTGS 374
Score = 28.3 bits (60), Expect = 8.9
Identities = 23/71 (32%), Positives = 25/71 (35%), Gaps = 8/71 (11%)
Frame = -1
Query: 411 PPPGXGXPXXTXPXGGQ-------PXKXGGXGRXXGRGGPXWXXK-XRXXPXRXPGXXRS 256
PPP G P P G P + GG G G P + R P R P S
Sbjct: 311 PPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSP-PTGS 369
Query: 255 XPPGXPXGGXP 223
P G P G P
Sbjct: 370 PPTGSPPTGRP 380
Score = 27.9 bits (59), Expect(2) = 0.94
Identities = 17/53 (32%), Positives = 17/53 (32%)
Frame = +2
Query: 566 PXGPPGXGXXPGPSPXAXAXLXXPXXXXGAAPLFRXFPXXPPPPLXGXPXPAR 724
P G P P P A P P P PPPP G P P R
Sbjct: 264 PKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSP--PPPPAGGSPPPPR 314
Score = 26.6 bits (56), Expect(2) = 0.73
Identities = 19/60 (31%), Positives = 21/60 (35%), Gaps = 2/60 (3%)
Frame = +2
Query: 557 GXSPXGPPGXGXXPGPSPXAXAXLXX--PXXXXGAAPLFRXFPXXPPPPLXGXPXPARGP 730
G SP PP G P P P + P G +P PPPP P R P
Sbjct: 307 GGSPP-PPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSP 365
Score = 23.8 bits (49), Expect(2) = 0.73
Identities = 15/52 (28%), Positives = 15/52 (28%)
Frame = +2
Query: 317 PPRPXXRPXPPXFXGCPPXGXVXXGXPXPGGGVXRAXPXXXXLWPPAXXRXP 472
PP P P G PP P P G P PPA P
Sbjct: 260 PPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPP 311
Score = 22.2 bits (45), Expect(2) = 0.94
Identities = 9/26 (34%), Positives = 9/26 (34%)
Frame = +2
Query: 836 PXXPRLAGPXXXPPPXXXXGXRGXPP 913
P PR P PPP PP
Sbjct: 310 PPPPRAGSPPPPPPPRGSPPTGSLPP 335
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 35.1 bits (77), Expect = 0.078
Identities = 19/56 (33%), Positives = 21/56 (37%)
Frame = -3
Query: 562 PPPEXGXXGPPPXNGXPPRXGGGXXGGGXKRXPXXXXGPKXXTXRXSXXDPPPRAG 395
PPP G PPP PP GG P P+ S PPP+AG
Sbjct: 271 PPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSL--PPPQAG 324
Score = 31.9 bits (69), Expect = 0.72
Identities = 24/84 (28%), Positives = 24/84 (28%), Gaps = 1/84 (1%)
Frame = +1
Query: 166 SPXXXXPPXPPXPPXXGAXGPPXXRXSRXXAPPXXRGAXXPXAXF-XXPSXXXPPXXPPP 342
SP PP PP A PP R PP P P PP PPP
Sbjct: 252 SPPLAGSGSPPPPP--AAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPP 309
Query: 343 TXSLXRLPAPGXXXXXXSXPGGGG 414
S P P G G
Sbjct: 310 RGSPPTGSLPPPQAGGSPPPAGTG 333
Score = 31.5 bits (68), Expect = 0.96
Identities = 25/73 (34%), Positives = 27/73 (36%)
Frame = +1
Query: 157 KXXSPXXXXPPXPPXPPXXGAXGPPXXRXSRXXAPPXXRGAXXPXAXFXXPSXXXPPXXP 336
K +P PP PP P G P S PP G+ P P PP P
Sbjct: 234 KRQAPPAGSPPPPPPPK-----GSPPLAGSGSPPPPPAAGSPPP------PRTGSPP--P 280
Query: 337 PPTXSLXRLPAPG 375
PPT S PA G
Sbjct: 281 PPTGSPPPPPAGG 293
Score = 30.7 bits (66), Expect = 1.7
Identities = 20/81 (24%), Positives = 21/81 (25%)
Frame = -3
Query: 562 PPPEXGXXGPPPXNGXPPRXGGGXXGGGXKRXPXXXXGPKXXTXRXSXXDPPPRAGXAXX 383
PPP G PP PP GG P K S P G
Sbjct: 303 PPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPPT 362
Query: 382 NXPXGRATGKXRXXGAARRAG 320
P GK + R G
Sbjct: 363 GRPPRGGPGKSSEESSESREG 383
Score = 29.1 bits (62), Expect = 5.1
Identities = 21/67 (31%), Positives = 21/67 (31%), Gaps = 9/67 (13%)
Frame = -3
Query: 568 RXPPPEXGXXGPPPXNGXPPRXGGG----XXGGGXKRXPXXXXGPKXXTXR-----XSXX 416
R PP PPP G PP G G G P P T
Sbjct: 235 RQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGS 294
Query: 415 DPPPRAG 395
PPPRAG
Sbjct: 295 PPPPRAG 301
Score = 28.7 bits (61), Expect = 6.7
Identities = 16/63 (25%), Positives = 18/63 (28%)
Frame = +1
Query: 184 PPXPPXPPXXGAXGPPXXRXSRXXAPPXXRGAXXPXAXFXXPSXXXPPXXPPPTXSLXRL 363
PP P P G P + PP G+ P P PPP
Sbjct: 246 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPP 305
Query: 364 PAP 372
P P
Sbjct: 306 PPP 308
Score = 28.7 bits (61), Expect = 6.7
Identities = 18/54 (33%), Positives = 19/54 (35%), Gaps = 4/54 (7%)
Frame = +2
Query: 563 SPXGPPGXGXXPGPS----PXAXAXLXXPXXXXGAAPLFRXFPXXPPPPLXGXP 712
SP PP G P P P P G+ P R PPPP G P
Sbjct: 260 SPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSP 313
Score = 28.7 bits (61), Expect = 6.7
Identities = 21/65 (32%), Positives = 24/65 (36%), Gaps = 4/65 (6%)
Frame = +1
Query: 169 PXXXXPPXPPXP---PXXGAXGPPXXRXSRXXAPPXXRGAXXPXAXFXXPS-XXXPPXXP 336
P PP PP P P G+ PP S PP G+ P + PP
Sbjct: 298 PRAGSPPPPPPPRGSPPTGSLPPPQAGGS---PPPAGTGSPPPPPRQKRQAPERSPPTGS 354
Query: 337 PPTXS 351
PPT S
Sbjct: 355 PPTGS 359
Score = 28.3 bits (60), Expect = 8.9
Identities = 23/71 (32%), Positives = 25/71 (35%), Gaps = 8/71 (11%)
Frame = -1
Query: 411 PPPGXGXPXXTXPXGGQ-------PXKXGGXGRXXGRGGPXWXXK-XRXXPXRXPGXXRS 256
PPP G P P G P + GG G G P + R P R P S
Sbjct: 296 PPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSP-PTGS 354
Query: 255 XPPGXPXGGXP 223
P G P G P
Sbjct: 355 PPTGSPPTGRP 365
Score = 27.9 bits (59), Expect(2) = 0.95
Identities = 17/53 (32%), Positives = 17/53 (32%)
Frame = +2
Query: 566 PXGPPGXGXXPGPSPXAXAXLXXPXXXXGAAPLFRXFPXXPPPPLXGXPXPAR 724
P G P P P A P P P PPPP G P P R
Sbjct: 249 PKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSP--PPPPAGGSPPPPR 299
Score = 26.6 bits (56), Expect(2) = 0.73
Identities = 19/60 (31%), Positives = 21/60 (35%), Gaps = 2/60 (3%)
Frame = +2
Query: 557 GXSPXGPPGXGXXPGPSPXAXAXLXX--PXXXXGAAPLFRXFPXXPPPPLXGXPXPARGP 730
G SP PP G P P P + P G +P PPPP P R P
Sbjct: 292 GGSPP-PPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSP 350
Score = 23.8 bits (49), Expect(2) = 0.73
Identities = 15/52 (28%), Positives = 15/52 (28%)
Frame = +2
Query: 317 PPRPXXRPXPPXFXGCPPXGXVXXGXPXPGGGVXRAXPXXXXLWPPAXXRXP 472
PP P P G PP P P G P PPA P
Sbjct: 245 PPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPP 296
Score = 22.2 bits (45), Expect(2) = 0.95
Identities = 9/26 (34%), Positives = 9/26 (34%)
Frame = +2
Query: 836 PXXPRLAGPXXXPPPXXXXGXRGXPP 913
P PR P PPP PP
Sbjct: 295 PPPPRAGSPPPPPPPRGSPPTGSLPP 320
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 34.3 bits (75), Expect = 0.14
Identities = 24/83 (28%), Positives = 27/83 (32%), Gaps = 4/83 (4%)
Frame = +1
Query: 169 PXXXXPPXPPXPPXXGA-XGPPXXRXSRXXAPPXXRG--AXXPXAXFXXPSXXXPPXXPP 339
P P PP PP G PP R PP G P + F P P PP
Sbjct: 279 PTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPP 338
Query: 340 PTXSL-XRLPAPGXXXXXXSXPG 405
P +P P + PG
Sbjct: 339 PGMRYPGGMPPPPPPRYPSAGPG 361
Score = 31.5 bits (68), Expect = 0.96
Identities = 21/75 (28%), Positives = 21/75 (28%), Gaps = 2/75 (2%)
Frame = -2
Query: 620 PXPXGRARGXPRXPGXPPXTXPG--GGEXRAPAXERXPPAXRXXXXXXXXXXGXAPXXGA 447
P P GR G P PG PP P G PP R P G
Sbjct: 301 PPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGP 360
Query: 446 KEXNXPXXXXXPPPP 402
P P PP
Sbjct: 361 GMYPPPPPSRPPAPP 375
Score = 31.5 bits (68), Expect = 0.96
Identities = 24/71 (33%), Positives = 25/71 (35%), Gaps = 2/71 (2%)
Frame = +1
Query: 166 SPXXXXPPXPPXPPXXGAXGPPXXRXSRXXAPPXXR--GAXXPXAXFXXPSXXXPPXXPP 339
+P P P PP GPP PP R G P PS P PP
Sbjct: 307 TPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPS-AGPGMYPP 365
Query: 340 PTXSLXRLPAP 372
P S R PAP
Sbjct: 366 PPPS--RPPAP 374
Score = 29.9 bits (64), Expect = 2.9
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = +1
Query: 169 PXXXXPPXPPXPPXXGAXGPPXXRXSRXXAPPXXRGAXXP 288
P PP PP P G P SR APP G P
Sbjct: 344 PGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPP 383
Score = 29.1 bits (62), Expect = 5.1
Identities = 23/82 (28%), Positives = 24/82 (29%)
Frame = +2
Query: 185 PRXPXPPQXXGX*GXPPXGXPGGXLRXSPGXRXGXXRXFXXHXGPPRPXXRPXPPXFXGC 364
P P PP P PG R P G PP P P PP G
Sbjct: 261 PPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSG----MWPPPPPPPPGRTPGPPGMPGM 316
Query: 365 PPXGXVXXGXPXPGGGVXRAXP 430
PP P GG+ P
Sbjct: 317 PPPPPPSRFGPPGMGGMPPPPP 338
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 34.3 bits (75), Expect = 0.14
Identities = 26/85 (30%), Positives = 26/85 (30%), Gaps = 4/85 (4%)
Frame = -1
Query: 456 AGGQRXXXXGXARXTPPPGX----GXPXXTXPXGGQPXKXGGXGRXXGRGGPXWXXKXRX 289
AGG PPPG G P P GG P GG GG
Sbjct: 700 AGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPP 759
Query: 288 XPXRXPGXXRSXPPGXPXGGXPXXP 214
P PG PP P GG P
Sbjct: 760 PPPPPPGGCPPPPPPPPPGGFKGGP 784
Score = 31.5 bits (68), Expect = 0.96
Identities = 26/96 (27%), Positives = 27/96 (28%), Gaps = 1/96 (1%)
Frame = +1
Query: 169 PXXXXPPXPPX-PPXXGAXGPPXXRXSRXXAPPXXRGAXXPXAXFXXPSXXXPPXXPPPT 345
P PP PP PP G PP PP G P P P PPP
Sbjct: 708 PITGGPPPPPGLPPITGGPPPPPPPGG---LPPITGGPPPPPPPGGLPPISGGPPPPPPP 764
Query: 346 XSLXRLPAPGXXXXXXSXPGGGGXXXXXGXXXSLAP 453
P P GG G +AP
Sbjct: 765 PG--GCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAP 798
Score = 31.5 bits (68), Expect = 0.96
Identities = 17/53 (32%), Positives = 17/53 (32%)
Frame = -3
Query: 562 PPPEXGXXGPPPXNGXPPRXGGGXXGGGXKRXPXXXXGPKXXTXRXSXXDPPP 404
PP G PPP G PP GG P GP PPP
Sbjct: 720 PPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 772
Score = 29.9 bits (64), Expect = 2.9
Identities = 23/76 (30%), Positives = 23/76 (30%)
Frame = -2
Query: 626 GXPXPXGRARGXPRXPGXPPXTXPGGGEXRAPAXERXPPAXRXXXXXXXXXXGXAPXXGA 447
G P P G P G PP P GG P PP P G
Sbjct: 724 GGPPPPPPPGGLPPITGGPPPPPPPGG---LPPISGGPPPPPPPPGGCPPPPPPPPPGGF 780
Query: 446 KEXNXPXXXXXPPPPG 399
K P PPPPG
Sbjct: 781 KGGPPP-----PPPPG 791
Score = 29.1 bits (62), Expect = 5.1
Identities = 24/76 (31%), Positives = 25/76 (32%)
Frame = -1
Query: 411 PPPGXGXPXXTXPXGGQPXKXGGXGRXXGRGGPXWXXKXRXXPXRXPGXXRSXPPGXPXG 232
PPP G P T GG P G GGP P G PP P G
Sbjct: 713 PPPPPGLPPIT---GGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPP---PPPPPPG 766
Query: 231 GXPXXPXXWGGXGXRG 184
G P P G +G
Sbjct: 767 GCPPPPPPPPPGGFKG 782
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 34.3 bits (75), Expect = 0.14
Identities = 26/85 (30%), Positives = 26/85 (30%), Gaps = 4/85 (4%)
Frame = -1
Query: 456 AGGQRXXXXGXARXTPPPGX----GXPXXTXPXGGQPXKXGGXGRXXGRGGPXWXXKXRX 289
AGG PPPG G P P GG P GG GG
Sbjct: 700 AGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPP 759
Query: 288 XPXRXPGXXRSXPPGXPXGGXPXXP 214
P PG PP P GG P
Sbjct: 760 PPPPPPGGCPPPPPPPPPGGFKGGP 784
Score = 31.5 bits (68), Expect = 0.96
Identities = 26/96 (27%), Positives = 27/96 (28%), Gaps = 1/96 (1%)
Frame = +1
Query: 169 PXXXXPPXPPX-PPXXGAXGPPXXRXSRXXAPPXXRGAXXPXAXFXXPSXXXPPXXPPPT 345
P PP PP PP G PP PP G P P P PPP
Sbjct: 708 PITGGPPPPPGLPPITGGPPPPPPPGG---LPPITGGPPPPPPPGGLPPISGGPPPPPPP 764
Query: 346 XSLXRLPAPGXXXXXXSXPGGGGXXXXXGXXXSLAP 453
P P GG G +AP
Sbjct: 765 PG--GCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAP 798
Score = 31.5 bits (68), Expect = 0.96
Identities = 17/53 (32%), Positives = 17/53 (32%)
Frame = -3
Query: 562 PPPEXGXXGPPPXNGXPPRXGGGXXGGGXKRXPXXXXGPKXXTXRXSXXDPPP 404
PP G PPP G PP GG P GP PPP
Sbjct: 720 PPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 772
Score = 29.9 bits (64), Expect = 2.9
Identities = 23/76 (30%), Positives = 23/76 (30%)
Frame = -2
Query: 626 GXPXPXGRARGXPRXPGXPPXTXPGGGEXRAPAXERXPPAXRXXXXXXXXXXGXAPXXGA 447
G P P G P G PP P GG P PP P G
Sbjct: 724 GGPPPPPPPGGLPPITGGPPPPPPPGG---LPPISGGPPPPPPPPGGCPPPPPPPPPGGF 780
Query: 446 KEXNXPXXXXXPPPPG 399
K P PPPPG
Sbjct: 781 KGGPPP-----PPPPG 791
Score = 29.1 bits (62), Expect = 5.1
Identities = 24/76 (31%), Positives = 25/76 (32%)
Frame = -1
Query: 411 PPPGXGXPXXTXPXGGQPXKXGGXGRXXGRGGPXWXXKXRXXPXRXPGXXRSXPPGXPXG 232
PPP G P T GG P G GGP P G PP P G
Sbjct: 713 PPPPPGLPPIT---GGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPP---PPPPPPG 766
Query: 231 GXPXXPXXWGGXGXRG 184
G P P G +G
Sbjct: 767 GCPPPPPPPPPGGFKG 782
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 34.3 bits (75), Expect = 0.14
Identities = 24/83 (28%), Positives = 27/83 (32%), Gaps = 4/83 (4%)
Frame = +1
Query: 169 PXXXXPPXPPXPPXXGA-XGPPXXRXSRXXAPPXXRG--AXXPXAXFXXPSXXXPPXXPP 339
P P PP PP G PP R PP G P + F P P PP
Sbjct: 289 PTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPP 348
Query: 340 PTXSL-XRLPAPGXXXXXXSXPG 405
P +P P + PG
Sbjct: 349 PGMRYPGGMPPPPPPRYPSAGPG 371
Score = 31.5 bits (68), Expect = 0.96
Identities = 21/75 (28%), Positives = 21/75 (28%), Gaps = 2/75 (2%)
Frame = -2
Query: 620 PXPXGRARGXPRXPGXPPXTXPG--GGEXRAPAXERXPPAXRXXXXXXXXXXGXAPXXGA 447
P P GR G P PG PP P G PP R P G
Sbjct: 311 PPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGP 370
Query: 446 KEXNXPXXXXXPPPP 402
P P PP
Sbjct: 371 GMYPPPPPSRPPAPP 385
Score = 31.5 bits (68), Expect = 0.96
Identities = 24/71 (33%), Positives = 25/71 (35%), Gaps = 2/71 (2%)
Frame = +1
Query: 166 SPXXXXPPXPPXPPXXGAXGPPXXRXSRXXAPPXXR--GAXXPXAXFXXPSXXXPPXXPP 339
+P P P PP GPP PP R G P PS P PP
Sbjct: 317 TPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPS-AGPGMYPP 375
Query: 340 PTXSLXRLPAP 372
P S R PAP
Sbjct: 376 PPPS--RPPAP 384
Score = 29.9 bits (64), Expect = 2.9
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = +1
Query: 169 PXXXXPPXPPXPPXXGAXGPPXXRXSRXXAPPXXRGAXXP 288
P PP PP P G P SR APP G P
Sbjct: 354 PGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPP 393
Score = 29.1 bits (62), Expect = 5.1
Identities = 23/82 (28%), Positives = 24/82 (29%)
Frame = +2
Query: 185 PRXPXPPQXXGX*GXPPXGXPGGXLRXSPGXRXGXXRXFXXHXGPPRPXXRPXPPXFXGC 364
P P PP P PG R P G PP P P PP G
Sbjct: 271 PPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSG----MWPPPPPPPPGRTPGPPGMPGM 326
Query: 365 PPXGXVXXGXPXPGGGVXRAXP 430
PP P GG+ P
Sbjct: 327 PPPPPPSRFGPPGMGGMPPPPP 348
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 34.3 bits (75), Expect = 0.14
Identities = 26/85 (30%), Positives = 26/85 (30%), Gaps = 4/85 (4%)
Frame = -1
Query: 456 AGGQRXXXXGXARXTPPPGX----GXPXXTXPXGGQPXKXGGXGRXXGRGGPXWXXKXRX 289
AGG PPPG G P P GG P GG GG
Sbjct: 283 AGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPP 342
Query: 288 XPXRXPGXXRSXPPGXPXGGXPXXP 214
P PG PP P GG P
Sbjct: 343 PPPPPPGGCPPPPPPPPPGGFKGGP 367
Score = 31.5 bits (68), Expect = 0.96
Identities = 26/96 (27%), Positives = 27/96 (28%), Gaps = 1/96 (1%)
Frame = +1
Query: 169 PXXXXPPXPPX-PPXXGAXGPPXXRXSRXXAPPXXRGAXXPXAXFXXPSXXXPPXXPPPT 345
P PP PP PP G PP PP G P P P PPP
Sbjct: 291 PITGGPPPPPGLPPITGGPPPPPPPGG---LPPITGGPPPPPPPGGLPPISGGPPPPPPP 347
Query: 346 XSLXRLPAPGXXXXXXSXPGGGGXXXXXGXXXSLAP 453
P P GG G +AP
Sbjct: 348 PG--GCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAP 381
Score = 31.5 bits (68), Expect = 0.96
Identities = 17/53 (32%), Positives = 17/53 (32%)
Frame = -3
Query: 562 PPPEXGXXGPPPXNGXPPRXGGGXXGGGXKRXPXXXXGPKXXTXRXSXXDPPP 404
PP G PPP G PP GG P GP PPP
Sbjct: 303 PPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 355
Score = 29.9 bits (64), Expect = 2.9
Identities = 23/76 (30%), Positives = 23/76 (30%)
Frame = -2
Query: 626 GXPXPXGRARGXPRXPGXPPXTXPGGGEXRAPAXERXPPAXRXXXXXXXXXXGXAPXXGA 447
G P P G P G PP P GG P PP P G
Sbjct: 307 GGPPPPPPPGGLPPITGGPPPPPPPGG---LPPISGGPPPPPPPPGGCPPPPPPPPPGGF 363
Query: 446 KEXNXPXXXXXPPPPG 399
K P PPPPG
Sbjct: 364 KGGPPP-----PPPPG 374
Score = 29.1 bits (62), Expect = 5.1
Identities = 24/76 (31%), Positives = 25/76 (32%)
Frame = -1
Query: 411 PPPGXGXPXXTXPXGGQPXKXGGXGRXXGRGGPXWXXKXRXXPXRXPGXXRSXPPGXPXG 232
PPP G P T GG P G GGP P G PP P G
Sbjct: 296 PPPPPGLPPIT---GGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPP---PPPPPPG 349
Query: 231 GXPXXPXXWGGXGXRG 184
G P P G +G
Sbjct: 350 GCPPPPPPPPPGGFKG 365
>AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen protein
103 protein.
Length = 371
Score = 34.3 bits (75), Expect = 0.14
Identities = 26/75 (34%), Positives = 27/75 (36%)
Frame = +2
Query: 185 PRXPXPPQXXGX*GXPPXGXPGGXLRXSPGXRXGXXRXFXXHXGPPRPXXRPXPPXFXGC 364
P P P G G P G PG R + G R GPP P P PP G
Sbjct: 220 PGAPGPAGDAGSPGQP--GAPGQPGRPGKNAQGGSSRP-----GPPGPAGPPGPPGNNGA 272
Query: 365 PPXGXVXXGXPXPGG 409
P G G P P G
Sbjct: 273 -PGGGYGVGPPGPPG 286
Score = 31.1 bits (67), Expect = 1.3
Identities = 23/74 (31%), Positives = 24/74 (32%), Gaps = 1/74 (1%)
Frame = +2
Query: 194 PXPPQXXGX*GXPPX-GXPGGXLRXSPGXRXGXXRXFXXHXGPPRPXXRPXPPXFXGCPP 370
P PP G G P G PGG P G G P P +P P G P
Sbjct: 255 PGPPGPAGPPGPPGNNGAPGGGYGVGPPGPPGPSGR-PGAPGQPGPDGQPGAPGNDGTPG 313
Query: 371 XGXVXXGXPXPGGG 412
P GGG
Sbjct: 314 TDAAYCPCPGRGGG 327
>Z81503-1|CAB04111.1| 305|Caenorhabditis elegans Hypothetical
protein F14F7.1 protein.
Length = 305
Score = 33.9 bits (74), Expect = 0.18
Identities = 44/172 (25%), Positives = 45/172 (26%), Gaps = 1/172 (0%)
Frame = -1
Query: 696 GGGGXXGKXRKRGAAPXXXXGXXRXAXAXGEGPGXXPXPGGPXGDXPRRXXXXXXXXXXX 517
G G G K G+ P G PG PG P D
Sbjct: 125 GAWGMPGNPGKGGSGPCHPVVPTPCKPCPGGRPGPPGPPGRPGSDGQPGRPATGGGAAPR 184
Query: 516 XXXXXXXXXXXXXXXXXRXXAGGQ-RXXXXGXARXTPPPGXGXPXXTXPXGGQPXKXGGX 340
R A GQ G PG P G P GG
Sbjct: 185 PGPPGPKGPRGAPGNSGRAGAPGQPGNDAHGYGGGVGAPGPAGPRGAPGPAGHPGSSGG- 243
Query: 339 GRXXGRGGPXWXXKXRXXPXRXPGXXRSXPPGXPXGGXPXXPXXWGGXGXRG 184
GR GP P R PG P G P G P P GG G RG
Sbjct: 244 ----GRPGPAGPKGAPGQPGR-PG-----PDGHP--GQPGRPGQSGGSGNRG 283
>Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical protein
R08B4.1b protein.
Length = 1160
Score = 33.9 bits (74), Expect = 0.18
Identities = 21/83 (25%), Positives = 23/83 (27%)
Frame = -2
Query: 413 PPPPGXEXXXKXXPGAGNRXXEXVGGGXXGGXXXDGXXKXAXGXXAPRXXGGAXXREXRX 234
PPPP P G GGG G G G GG+
Sbjct: 764 PPPPSDFIDIPNDPTLGGPTGSSGGGGGGGNGGSGGGGGGGGGGSGGSGGGGSNSNSGGG 823
Query: 233 XGGPXAPXSGGXGGXGGXXXXGD 165
G GG G GG G+
Sbjct: 824 GGNGGGGNGGGGNGNGGGAGDGN 846
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 33.5 bits (73), Expect = 0.24
Identities = 22/75 (29%), Positives = 22/75 (29%)
Frame = -1
Query: 408 PPGXGXPXXTXPXGGQPXKXGGXGRXXGRGGPXWXXKXRXXPXRXPGXXRSXPPGXPXGG 229
PPG P P GG P G G GGP P P G P G
Sbjct: 166 PPGLFDPSGAPPSGGPPGPFGPSGAPPS-GGPPGPFNPSEAPPSGGPTGPFDPSGAPPSG 224
Query: 228 XPXXPXXWGGXGXRG 184
P P G G
Sbjct: 225 GPPGPFNPSGAPPSG 239
Score = 32.3 bits (70), Expect = 0.55
Identities = 23/73 (31%), Positives = 23/73 (31%)
Frame = +2
Query: 185 PRXPXPPQXXGX*GXPPXGXPGGXLRXSPGXRXGXXRXFXXHXGPPRPXXRPXPPXFXGC 364
P PP G G PP G P G S G G P P P G
Sbjct: 176 PPSGGPPGPFGPSGAPPSGGPPGPFNPSEAPPSGGPTGPFDPSGAPPSGGPPGPFNPSGA 235
Query: 365 PPXGXVXXGXPXP 403
PP G G P P
Sbjct: 236 PPSG----GPPGP 244
Score = 31.1 bits (67), Expect = 1.3
Identities = 21/75 (28%), Positives = 21/75 (28%)
Frame = -1
Query: 408 PPGXGXPXXTXPXGGQPXKXGGXGRXXGRGGPXWXXKXRXXPXRXPGXXRSXPPGXPXGG 229
PPG P P GG P G GGP P P G P G
Sbjct: 391 PPGPFDPSGAPPSGGPPGPFNPSGAPPS-GGPPGPFNPSGAPPSGGPPGPFNPSGAPPSG 449
Query: 228 XPXXPXXWGGXGXRG 184
P P G G
Sbjct: 450 GPPGPFNPSGAPPSG 464
Score = 31.1 bits (67), Expect = 1.3
Identities = 21/75 (28%), Positives = 21/75 (28%)
Frame = -1
Query: 408 PPGXGXPXXTXPXGGQPXKXGGXGRXXGRGGPXWXXKXRXXPXRXPGXXRSXPPGXPXGG 229
PPG P P GG P G GGP P P G P G
Sbjct: 406 PPGPFNPSGAPPSGGPPGPFNPSGAPPS-GGPPGPFNPSGAPPSGGPPGPFNPSGAPPSG 464
Query: 228 XPXXPXXWGGXGXRG 184
P P G G
Sbjct: 465 GPPGPFNPSGAPPSG 479
Score = 31.1 bits (67), Expect = 1.3
Identities = 21/75 (28%), Positives = 21/75 (28%)
Frame = -1
Query: 408 PPGXGXPXXTXPXGGQPXKXGGXGRXXGRGGPXWXXKXRXXPXRXPGXXRSXPPGXPXGG 229
PPG P P GG P G GGP P P G P G
Sbjct: 421 PPGPFNPSGAPPSGGPPGPFNPSGAPPS-GGPPGPFNPSGAPPSGGPPGPFNPSGAPPSG 479
Query: 228 XPXXPXXWGGXGXRG 184
P P G G
Sbjct: 480 GPPGPFDPSGAPPSG 494
Score = 31.1 bits (67), Expect = 1.3
Identities = 21/75 (28%), Positives = 21/75 (28%)
Frame = -1
Query: 408 PPGXGXPXXTXPXGGQPXKXGGXGRXXGRGGPXWXXKXRXXPXRXPGXXRSXPPGXPXGG 229
PPG P P GG P G GGP P P G P G
Sbjct: 436 PPGPFNPSGAPPSGGPPGPFNPSGAPPS-GGPPGPFNPSGAPPSGGPPGPFDPSGAPPSG 494
Query: 228 XPXXPXXWGGXGXRG 184
P P G G
Sbjct: 495 GPPGPFNPSGAPPSG 509
Score = 30.7 bits (66), Expect = 1.7
Identities = 21/75 (28%), Positives = 21/75 (28%)
Frame = -1
Query: 408 PPGXGXPXXTXPXGGQPXKXGGXGRXXGRGGPXWXXKXRXXPXRXPGXXRSXPPGXPXGG 229
PPG P P GG P G GGP P P G P G
Sbjct: 226 PPGPFNPSGAPPSGGPPGPFDPSGAPPS-GGPPGPFNPSGAPPSGGPPGPFDPSGAPPSG 284
Query: 228 XPXXPXXWGGXGXRG 184
P P G G
Sbjct: 285 GPPGPFDPSGAPPSG 299
Score = 30.7 bits (66), Expect = 1.7
Identities = 21/75 (28%), Positives = 21/75 (28%)
Frame = -1
Query: 408 PPGXGXPXXTXPXGGQPXKXGGXGRXXGRGGPXWXXKXRXXPXRXPGXXRSXPPGXPXGG 229
PPG P P GG P G GGP P P G P G
Sbjct: 241 PPGPFDPSGAPPSGGPPGPFNPSGAPPS-GGPPGPFDPSGAPPSGGPPGPFDPSGAPPSG 299
Query: 228 XPXXPXXWGGXGXRG 184
P P G G
Sbjct: 300 GPPGPFDPSGAQPSG 314
Score = 30.7 bits (66), Expect = 1.7
Identities = 21/75 (28%), Positives = 21/75 (28%)
Frame = -1
Query: 408 PPGXGXPXXTXPXGGQPXKXGGXGRXXGRGGPXWXXKXRXXPXRXPGXXRSXPPGXPXGG 229
PPG P P GG P G GGP P P G P G
Sbjct: 286 PPGPFDPSGAPPSGGPPGPFDPSGAQPS-GGPPGPFNPSGAPPSGGPPGPFDPSGAPPSG 344
Query: 228 XPXXPXXWGGXGXRG 184
P P G G
Sbjct: 345 GPPGPFNPSGAPPSG 359
Score = 30.7 bits (66), Expect = 1.7
Identities = 21/75 (28%), Positives = 21/75 (28%)
Frame = -1
Query: 408 PPGXGXPXXTXPXGGQPXKXGGXGRXXGRGGPXWXXKXRXXPXRXPGXXRSXPPGXPXGG 229
PPG P P GG P G GGP P P G P G
Sbjct: 301 PPGPFDPSGAQPSGGPPGPFNPSGAPPS-GGPPGPFDPSGAPPSGGPPGPFNPSGAPPSG 359
Query: 228 XPXXPXXWGGXGXRG 184
P P G G
Sbjct: 360 GPPGPFDPSGAPPSG 374
Score = 30.7 bits (66), Expect = 1.7
Identities = 21/75 (28%), Positives = 21/75 (28%)
Frame = -1
Query: 408 PPGXGXPXXTXPXGGQPXKXGGXGRXXGRGGPXWXXKXRXXPXRXPGXXRSXPPGXPXGG 229
PPG P P GG P G GGP P P G P G
Sbjct: 316 PPGPFNPSGAPPSGGPPGPFDPSGAPPS-GGPPGPFNPSGAPPSGGPPGPFDPSGAPPSG 374
Query: 228 XPXXPXXWGGXGXRG 184
P P G G
Sbjct: 375 GPPGPFDPSGAPPSG 389
Score = 30.7 bits (66), Expect = 1.7
Identities = 21/75 (28%), Positives = 21/75 (28%)
Frame = -1
Query: 408 PPGXGXPXXTXPXGGQPXKXGGXGRXXGRGGPXWXXKXRXXPXRXPGXXRSXPPGXPXGG 229
PPG P P GG P G GGP P P G P G
Sbjct: 331 PPGPFDPSGAPPSGGPPGPFNPSGAPPS-GGPPGPFDPSGAPPSGGPPGPFDPSGAPPSG 389
Query: 228 XPXXPXXWGGXGXRG 184
P P G G
Sbjct: 390 GPPGPFDPSGAPPSG 404
Score = 30.7 bits (66), Expect = 1.7
Identities = 21/75 (28%), Positives = 21/75 (28%)
Frame = -1
Query: 408 PPGXGXPXXTXPXGGQPXKXGGXGRXXGRGGPXWXXKXRXXPXRXPGXXRSXPPGXPXGG 229
PPG P P GG P G GGP P P G P G
Sbjct: 376 PPGPFDPSGAPPSGGPPGPFDPSGAPPS-GGPPGPFNPSGAPPSGGPPGPFNPSGAPPSG 434
Query: 228 XPXXPXXWGGXGXRG 184
P P G G
Sbjct: 435 GPPGPFNPSGAPPSG 449
Score = 30.7 bits (66), Expect = 1.7
Identities = 21/75 (28%), Positives = 21/75 (28%)
Frame = -1
Query: 408 PPGXGXPXXTXPXGGQPXKXGGXGRXXGRGGPXWXXKXRXXPXRXPGXXRSXPPGXPXGG 229
PPG P P GG P G GGP P P G P G
Sbjct: 451 PPGPFNPSGAPPSGGPPGPFNPSGAPPS-GGPPGPFDPSGAPPSGGPPGPFNPSGAPPSG 509
Query: 228 XPXXPXXWGGXGXRG 184
P P G G
Sbjct: 510 GPPGPFDPSGAPPSG 524
Score = 30.3 bits (65), Expect = 2.2
Identities = 21/75 (28%), Positives = 21/75 (28%)
Frame = -1
Query: 408 PPGXGXPXXTXPXGGQPXKXGGXGRXXGRGGPXWXXKXRXXPXRXPGXXRSXPPGXPXGG 229
PPG P P GG P G GGP P P G P G
Sbjct: 346 PPGPFNPSGAPPSGGPPGPFDPSGAPPS-GGPPGPFDPSGAPPSGGPPGPFDPSGAPPSG 404
Query: 228 XPXXPXXWGGXGXRG 184
P P G G
Sbjct: 405 GPPGPFNPSGAPPSG 419
Score = 30.3 bits (65), Expect = 2.2
Identities = 21/75 (28%), Positives = 21/75 (28%)
Frame = -1
Query: 408 PPGXGXPXXTXPXGGQPXKXGGXGRXXGRGGPXWXXKXRXXPXRXPGXXRSXPPGXPXGG 229
PPG P P GG P G GGP P P G P G
Sbjct: 361 PPGPFDPSGAPPSGGPPGPFDPSGAPPS-GGPPGPFDPSGAPPSGGPPGPFNPSGAPPSG 419
Query: 228 XPXXPXXWGGXGXRG 184
P P G G
Sbjct: 420 GPPGPFNPSGAPPSG 434
Score = 29.5 bits (63), Expect = 3.9
Identities = 21/75 (28%), Positives = 22/75 (29%)
Frame = -1
Query: 408 PPGXGXPXXTXPXGGQPXKXGGXGRXXGRGGPXWXXKXRXXPXRXPGXXRSXPPGXPXGG 229
PPG P P GG P G G P P P + P G P G
Sbjct: 271 PPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAQPSGGPPGPFN-PSGAPPSG 329
Query: 228 XPXXPXXWGGXGXRG 184
P P G G
Sbjct: 330 GPPGPFDPSGAPPSG 344
Score = 29.1 bits (62), Expect = 5.1
Identities = 22/73 (30%), Positives = 22/73 (30%)
Frame = +2
Query: 185 PRXPXPPQXXGX*GXPPXGXPGGXLRXSPGXRXGXXRXFXXHXGPPRPXXRPXPPXFXGC 364
P PP G PP G P G S G G P P P G
Sbjct: 401 PPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGA 460
Query: 365 PPXGXVXXGXPXP 403
PP G G P P
Sbjct: 461 PPSG----GPPGP 469
Score = 29.1 bits (62), Expect = 5.1
Identities = 22/73 (30%), Positives = 22/73 (30%)
Frame = +2
Query: 185 PRXPXPPQXXGX*GXPPXGXPGGXLRXSPGXRXGXXRXFXXHXGPPRPXXRPXPPXFXGC 364
P PP G PP G P G S G G P P P G
Sbjct: 416 PPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGA 475
Query: 365 PPXGXVXXGXPXP 403
PP G G P P
Sbjct: 476 PPSG----GPPGP 484
Score = 29.1 bits (62), Expect = 5.1
Identities = 22/73 (30%), Positives = 22/73 (30%)
Frame = +2
Query: 185 PRXPXPPQXXGX*GXPPXGXPGGXLRXSPGXRXGXXRXFXXHXGPPRPXXRPXPPXFXGC 364
P PP G PP G P G S G G P P P G
Sbjct: 431 PPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGA 490
Query: 365 PPXGXVXXGXPXP 403
PP G G P P
Sbjct: 491 PPSG----GPPGP 499
Score = 29.1 bits (62), Expect = 5.1
Identities = 22/73 (30%), Positives = 22/73 (30%)
Frame = +2
Query: 185 PRXPXPPQXXGX*GXPPXGXPGGXLRXSPGXRXGXXRXFXXHXGPPRPXXRPXPPXFXGC 364
P PP G PP G P G S G G P P P G
Sbjct: 446 PPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGA 505
Query: 365 PPXGXVXXGXPXP 403
PP G G P P
Sbjct: 506 PPSG----GPPGP 514
Score = 28.7 bits (61), Expect = 6.7
Identities = 22/73 (30%), Positives = 22/73 (30%)
Frame = +2
Query: 185 PRXPXPPQXXGX*GXPPXGXPGGXLRXSPGXRXGXXRXFXXHXGPPRPXXRPXPPXFXGC 364
P PP G PP G P G S G G P P P G
Sbjct: 236 PPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGA 295
Query: 365 PPXGXVXXGXPXP 403
PP G G P P
Sbjct: 296 PPSG----GPPGP 304
Score = 28.7 bits (61), Expect = 6.7
Identities = 22/73 (30%), Positives = 22/73 (30%)
Frame = +2
Query: 185 PRXPXPPQXXGX*GXPPXGXPGGXLRXSPGXRXGXXRXFXXHXGPPRPXXRPXPPXFXGC 364
P PP G PP G P G S G G P P P G
Sbjct: 326 PPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGA 385
Query: 365 PPXGXVXXGXPXP 403
PP G G P P
Sbjct: 386 PPSG----GPPGP 394
Score = 28.7 bits (61), Expect = 6.7
Identities = 22/73 (30%), Positives = 22/73 (30%)
Frame = +2
Query: 185 PRXPXPPQXXGX*GXPPXGXPGGXLRXSPGXRXGXXRXFXXHXGPPRPXXRPXPPXFXGC 364
P PP G PP G P G S G G P P P G
Sbjct: 386 PPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGA 445
Query: 365 PPXGXVXXGXPXP 403
PP G G P P
Sbjct: 446 PPSG----GPPGP 454
Score = 28.3 bits (60), Expect = 8.9
Identities = 22/73 (30%), Positives = 22/73 (30%)
Frame = +2
Query: 185 PRXPXPPQXXGX*GXPPXGXPGGXLRXSPGXRXGXXRXFXXHXGPPRPXXRPXPPXFXGC 364
P PP G PP G P G S G G P P P G
Sbjct: 221 PPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGA 280
Query: 365 PPXGXVXXGXPXP 403
PP G G P P
Sbjct: 281 PPSG----GPPGP 289
Score = 28.3 bits (60), Expect = 8.9
Identities = 22/73 (30%), Positives = 22/73 (30%)
Frame = +2
Query: 185 PRXPXPPQXXGX*GXPPXGXPGGXLRXSPGXRXGXXRXFXXHXGPPRPXXRPXPPXFXGC 364
P PP G PP G P G S G G P P P G
Sbjct: 341 PPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGA 400
Query: 365 PPXGXVXXGXPXP 403
PP G G P P
Sbjct: 401 PPSG----GPPGP 409
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 32.7 bits (71), Expect = 0.41
Identities = 20/59 (33%), Positives = 21/59 (35%)
Frame = -1
Query: 729 GPRAGXGXPXRGGGGXXGKXRKRGAAPXXXXGXXRXAXAXGEGPGXXPXPGGPXGDXPR 553
GP G G P G GG G G G GPG PGGP G P+
Sbjct: 166 GPPGGMGGPP-GHGGMGGPPGHGGQGGPPGHGGMGGPPPGQGGPGGPGGPGGPGGMLPK 223
Score = 30.7 bits (66), Expect = 1.7
Identities = 23/65 (35%), Positives = 24/65 (36%), Gaps = 3/65 (4%)
Frame = +2
Query: 224 GXPPXGXPGGXLRXSPGXRXGXXRXFXXHXGPPRPXXRPXPPXFXGC--PPXGXVXXGXP 397
G PP GG R PG G GPP + PP G PP G G P
Sbjct: 153 GPPPLMGGGGDPRGPPGGMGGPP-GHGGMGGPPGHGGQGGPPGHGGMGGPPPGQGGPGGP 211
Query: 398 -XPGG 409
PGG
Sbjct: 212 GGPGG 216
Score = 30.7 bits (66), Expect = 1.7
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = -3
Query: 562 PPPEXGXXGPPPXNGXPPRXGGGXXGGG 479
PP G GPPP G P GG GG
Sbjct: 192 PPGHGGMGGPPPGQGGPGGPGGPGGPGG 219
Score = 28.7 bits (61), Expect = 6.7
Identities = 20/66 (30%), Positives = 21/66 (31%), Gaps = 1/66 (1%)
Frame = -3
Query: 562 PPPEXGXXGPPPXNGXPPRXGGGXXGGGXKRXPXXXXGPKXXTXRXSXXDPPP-RAGXAX 386
PPP G G P PP GG G G P G PPP + G
Sbjct: 154 PPPLMGGGGDPRG---PPGGMGGPPGHGGMGGPPGHGGQGGPPGHGGMGGPPPGQGGPGG 210
Query: 385 XNXPXG 368
P G
Sbjct: 211 PGGPGG 216
Score = 28.7 bits (61), Expect = 6.7
Identities = 22/63 (34%), Positives = 23/63 (36%)
Frame = -1
Query: 411 PPPGXGXPXXTXPXGGQPXKXGGXGRXXGRGGPXWXXKXRXXPXRXPGXXRSXPPGXPXG 232
PP G G P GG P GG G G GG + P PG PG P G
Sbjct: 167 PPGGMGGPPGHGGMGGPPG-HGGQGGPPGHGGMGGPPPGQGGPG-GPGG-----PGGPGG 219
Query: 231 GXP 223
P
Sbjct: 220 MLP 222
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 32.7 bits (71), Expect = 0.41
Identities = 20/59 (33%), Positives = 21/59 (35%)
Frame = -1
Query: 729 GPRAGXGXPXRGGGGXXGKXRKRGAAPXXXXGXXRXAXAXGEGPGXXPXPGGPXGDXPR 553
GP G G P G GG G G G GPG PGGP G P+
Sbjct: 446 GPPGGMGGPP-GHGGMGGPPGHGGQGGPPGHGGMGGPPPGQGGPGGPGGPGGPGGMLPK 503
Score = 30.7 bits (66), Expect = 1.7
Identities = 23/65 (35%), Positives = 24/65 (36%), Gaps = 3/65 (4%)
Frame = +2
Query: 224 GXPPXGXPGGXLRXSPGXRXGXXRXFXXHXGPPRPXXRPXPPXFXGC--PPXGXVXXGXP 397
G PP GG R PG G GPP + PP G PP G G P
Sbjct: 433 GPPPLMGGGGDPRGPPGGMGGPP-GHGGMGGPPGHGGQGGPPGHGGMGGPPPGQGGPGGP 491
Query: 398 -XPGG 409
PGG
Sbjct: 492 GGPGG 496
Score = 30.7 bits (66), Expect = 1.7
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = -3
Query: 562 PPPEXGXXGPPPXNGXPPRXGGGXXGGG 479
PP G GPPP G P GG GG
Sbjct: 472 PPGHGGMGGPPPGQGGPGGPGGPGGPGG 499
Score = 28.7 bits (61), Expect = 6.7
Identities = 20/66 (30%), Positives = 21/66 (31%), Gaps = 1/66 (1%)
Frame = -3
Query: 562 PPPEXGXXGPPPXNGXPPRXGGGXXGGGXKRXPXXXXGPKXXTXRXSXXDPPP-RAGXAX 386
PPP G G P PP GG G G P G PPP + G
Sbjct: 434 PPPLMGGGGDPRG---PPGGMGGPPGHGGMGGPPGHGGQGGPPGHGGMGGPPPGQGGPGG 490
Query: 385 XNXPXG 368
P G
Sbjct: 491 PGGPGG 496
Score = 28.7 bits (61), Expect = 6.7
Identities = 22/63 (34%), Positives = 23/63 (36%)
Frame = -1
Query: 411 PPPGXGXPXXTXPXGGQPXKXGGXGRXXGRGGPXWXXKXRXXPXRXPGXXRSXPPGXPXG 232
PP G G P GG P GG G G GG + P PG PG P G
Sbjct: 447 PPGGMGGPPGHGGMGGPPG-HGGQGGPPGHGGMGGPPPGQGGPG-GPGG-----PGGPGG 499
Query: 231 GXP 223
P
Sbjct: 500 MLP 502
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 32.7 bits (71), Expect = 0.41
Identities = 21/72 (29%), Positives = 23/72 (31%), Gaps = 3/72 (4%)
Frame = +1
Query: 166 SPXXXXPPXPPXPPXXG---AXGPPXXRXSRXXAPPXXRGAXXPXAXFXXPSXXXPPXXP 336
SP PP PP PP PP + AP P PS PP P
Sbjct: 1335 SPSPPPPPPPPPPPSDDLTPVPPPPPPPPTMSKAPTGVPLPVPPPPPLFSPSMILPPPPP 1394
Query: 337 PPTXSLXRLPAP 372
P + P P
Sbjct: 1395 PLPSEEKKNPLP 1406
Score = 32.7 bits (71), Expect = 0.41
Identities = 21/65 (32%), Positives = 21/65 (32%), Gaps = 6/65 (9%)
Frame = +1
Query: 166 SPXXXXPPXPPXPPXXGAX-----GPPXXRX-SRXXAPPXXRGAXXPXAXFXXPSXXXPP 327
SP PP PP G GPP R S PP G P P P
Sbjct: 1548 SPQNRGPPMGGLPPPHGGMNGWRGGPPPPRGGSHCQGPPPLMGGPPPRLGMPPPGPPPPN 1607
Query: 328 XXPPP 342
PPP
Sbjct: 1608 GGPPP 1612
Score = 29.1 bits (62), Expect = 5.1
Identities = 12/20 (60%), Positives = 12/20 (60%), Gaps = 2/20 (10%)
Frame = -3
Query: 562 PPPEXGXX--GPPPXNGXPP 509
PPP G GPPP NG PP
Sbjct: 1592 PPPRLGMPPPGPPPPNGGPP 1611
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 32.3 bits (70), Expect = 0.55
Identities = 24/82 (29%), Positives = 25/82 (30%)
Frame = -1
Query: 429 GXARXTPPPGXGXPXXTXPXGGQPXKXGGXGRXXGRGGPXWXXKXRXXPXRXPGXXRSXP 250
G A PPPG P GQP G G+ G P PG P
Sbjct: 205 GDAGSPPPPGPPGPPGPPGNDGQPGAPGQDGQPGAPGTNTVNSPGGPGPAGPPGP--PGP 262
Query: 249 PGXPXGGXPXXPXXWGGXGXRG 184
PG G P G G G
Sbjct: 263 PGQDGSGGAAQPGPPGPPGPPG 284
Score = 31.9 bits (69), Expect = 0.72
Identities = 36/158 (22%), Positives = 41/158 (25%), Gaps = 10/158 (6%)
Frame = -2
Query: 626 GXPXPXGRARGXPRXPGXPPXTXPGGGEXRAPAXERXPPAXRXXXXXXXXXXGXAPXXGA 447
G P G+ G P PG PGG P PP P
Sbjct: 226 GQPGAPGQD-GQPGAPGTNTVNSPGGPGPAGPPGPPGPPGQDGSGGAAQPGPPGPPGPPG 284
Query: 446 KEXNXPXXXXXPPPPGXE----------XXXKXXPGAGNRXXEXVGGGXXGGXXXDGXXK 297
+ P P PG + P G + GG GG G
Sbjct: 285 ND-GQPGGPGQPGGPGQDGGPGTDAAYCPCPPRTPAGGGGGGDFPAGGGGGGYSTGGGGG 343
Query: 296 XAXGXXAPRXXGGAXXREXRXXGGPXAPXSGGXGGXGG 183
A A GGA GG +GG GG
Sbjct: 344 RADSGGAAGGAGGAGGYSGGGGGGGGGAAAGGGYNAGG 381
>Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical
protein F23H12.4 protein.
Length = 301
Score = 31.9 bits (69), Expect = 0.72
Identities = 20/59 (33%), Positives = 21/59 (35%), Gaps = 1/59 (1%)
Frame = +1
Query: 169 PXXXXPPXPPXPP-XXGAXGPPXXRXSRXXAPPXXRGAXXPXAXFXXPSXXXPPXXPPP 342
P PP PP PP G GPP PP +GA P PP P P
Sbjct: 223 PGDSGPPGPPGPPGAPGNDGPP--------GPPGPKGAPGPDGPPGVDGQSGPPGPPGP 273
>Z68507-1|CAA92826.1| 337|Caenorhabditis elegans Hypothetical
protein M18.1 protein.
Length = 337
Score = 31.9 bits (69), Expect = 0.72
Identities = 27/91 (29%), Positives = 29/91 (31%), Gaps = 2/91 (2%)
Frame = -1
Query: 450 GQRXXXXGXARXTPPPGXGXPXXTXPXG--GQPXKXGGXGRXXGRGGPXWXXKXRXXPXR 277
GQR + G G P P G GQP + G GR G P R
Sbjct: 156 GQRGSDGQPGQDAMGGGQGAPGPQGPAGDNGQPGRPGNDGRPGAPGAPGTRSVGRPGTAG 215
Query: 276 XPGXXRSXPPGXPXGGXPXXPXXWGGXGXRG 184
PG PPG G P G G G
Sbjct: 216 SPGP--QGPPG--QNGNDGQPGNDGAPGQPG 242
>V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-1 coding for a collagen.
).
Length = 296
Score = 31.9 bits (69), Expect = 0.72
Identities = 20/59 (33%), Positives = 21/59 (35%), Gaps = 1/59 (1%)
Frame = +1
Query: 169 PXXXXPPXPPXPP-XXGAXGPPXXRXSRXXAPPXXRGAXXPXAXFXXPSXXXPPXXPPP 342
P PP PP PP G GPP PP +GA P PP P P
Sbjct: 218 PGDSGPPGPPGPPGAPGNDGPP--------GPPGPKGAPGPDGPPGADGQSGPPGPPGP 268
>M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen
protein.
Length = 298
Score = 31.9 bits (69), Expect = 0.72
Identities = 41/178 (23%), Positives = 42/178 (23%), Gaps = 2/178 (1%)
Frame = -3
Query: 922 PXPGGXAXXPXRXXRGGXXXGPRQPGGXGXNXGAPXXXXXXXXXXXXXXXXXXXXXXXXR 743
P P G A P + R G P PG G P
Sbjct: 102 PGPPGPAGTPGKPGRPGKPGAPGLPGNPGRPPQQPCEPITPPPWKPCPQGPPGPPGPPGP 161
Query: 742 PQXXXXPXGXWXXXQ-GGXGXXGKXPKKGGGAXXXPGAXEXXXXXXXXXXXXXXXXXXXR 566
P P Q G G PK G PGA E
Sbjct: 162 PGDSGEPGSPGLPGQDAAPGEPG--PKGPKGPPGAPGAPEHQESQECPRGEPLIPGEP-- 217
Query: 565 XPPPEXGXXGPPPXNGXPPRXGG-GXXGGGXKRXPXXXXGPKXXTXRXSXXDPPPRAG 395
PP E G GPP G P G G G P G PP G
Sbjct: 218 GPPGEAGPQGPPGSPGQPGADGSPGQPGPKGPNGPDGQPGADGNPGAPGPAGPPGSPG 275
>J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 1 (col-1) gene, complete
cds. ).
Length = 296
Score = 31.9 bits (69), Expect = 0.72
Identities = 20/59 (33%), Positives = 21/59 (35%), Gaps = 1/59 (1%)
Frame = +1
Query: 169 PXXXXPPXPPXPP-XXGAXGPPXXRXSRXXAPPXXRGAXXPXAXFXXPSXXXPPXXPPP 342
P PP PP PP G GPP PP +GA P PP P P
Sbjct: 218 PGDSGPPGPPGPPGAPGNDGPP--------GPPGPKGAPGPDGPPGADGQSGPPGPPGP 268
>X64435-1|CAA45773.1| 318|Caenorhabditis elegans collagen protein.
Length = 318
Score = 31.5 bits (68), Expect = 0.96
Identities = 18/63 (28%), Positives = 23/63 (36%)
Frame = -3
Query: 562 PPPEXGXXGPPPXNGXPPRXGGGXXGGGXKRXPXXXXGPKXXTXRXSXXDPPPRAGXAXX 383
PP G GPP NG P + G G + P GP+ PP +G
Sbjct: 219 PPGPRGPKGPPGSNGLPSQ-NSGPPGPIGEMGPPGPPGPRGEPGPPGPFGPPGDSGEPGG 277
Query: 382 NXP 374
+ P
Sbjct: 278 HCP 280
>U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 3 protein.
Length = 302
Score = 31.5 bits (68), Expect = 0.96
Identities = 19/54 (35%), Positives = 20/54 (37%), Gaps = 1/54 (1%)
Frame = +1
Query: 184 PPXPPXPPXX-GAXGPPXXRXSRXXAPPXXRGAXXPXAXFXXPSXXXPPXXPPP 342
PP PP PP G G P + PP GA P P PP P P
Sbjct: 112 PPGPPGPPGRDGRPGAPGRPGN--PGPPGRDGALLPGPPPKPPCQKCPPGPPGP 163
Score = 31.1 bits (67), Expect = 1.3
Identities = 43/186 (23%), Positives = 49/186 (26%), Gaps = 12/186 (6%)
Frame = -3
Query: 916 PGGXAXXPXRXXRGGXXXGPRQPGGXGXNXGAPXXXXXXXXXXXXXXXXXXXXXXXXRPQ 737
P G P R R G P PG G + GA P+
Sbjct: 112 PPGPPGPPGRDGRPGAPGRPGNPGPPGRD-GALLPGPPPKPPCQKCPPGPPGPAGPPGPK 170
Query: 736 XXXXPXGX--WXXXQGGXGXXGKXPKKGG-GAXXXPGAXEXXXXXXXXXXXXXXXXXXXR 566
P G G G G G GA PG
Sbjct: 171 GLPGPQGDAGTSGQDGVPGLPGPPGPSGPQGAPGVPGEKGPTGEPGKVINGAPPGPPGPP 230
Query: 565 XPPPEXGXXGPPPXNGXPPRXG-------GGXXGGGXKRXPXXXXGPKXXTXRXSXXD-- 413
PP G GPP +G P + G G G P GP+ + D
Sbjct: 231 GPPGPQGPPGPPGKDGQPGKAGPPGLPGDPGEKGSDGLPGPHGGTGPRGPPGQPGSCDHC 290
Query: 412 PPPRAG 395
PPPR G
Sbjct: 291 PPPRTG 296
Score = 30.3 bits (65), Expect = 2.2
Identities = 24/70 (34%), Positives = 26/70 (37%), Gaps = 4/70 (5%)
Frame = +2
Query: 170 PXXPXPRXPXPPQXXGX*GXP----PXGXPGGXLRXSPGXRXGXXRXFXXHXGPPRPXXR 337
P P P P PQ G G P P G PG + +P G GPP P
Sbjct: 188 PGLPGPPGPSGPQ--GAPGVPGEKGPTGEPGKVINGAPPGPPGPP-------GPPGPQGP 238
Query: 338 PXPPXFXGCP 367
P PP G P
Sbjct: 239 PGPPGKDGQP 248
>U41624-3|AAF99944.1| 318|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 7 protein.
Length = 318
Score = 31.5 bits (68), Expect = 0.96
Identities = 18/63 (28%), Positives = 23/63 (36%)
Frame = -3
Query: 562 PPPEXGXXGPPPXNGXPPRXGGGXXGGGXKRXPXXXXGPKXXTXRXSXXDPPPRAGXAXX 383
PP G GPP NG P + G G + P GP+ PP +G
Sbjct: 219 PPGPRGPKGPPGSNGLPSQ-NSGPPGPIGEMGPPGPPGPRGEPGPPGPFGPPGDSGEPGG 277
Query: 382 NXP 374
+ P
Sbjct: 278 HCP 280
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 31.1 bits (67), Expect = 1.3
Identities = 21/75 (28%), Positives = 21/75 (28%)
Frame = -2
Query: 410 PPPGXEXXXKXXPGAGNRXXEXVGGGXXGGXXXDGXXKXAXGXXAPRXXGGAXXREXRXX 231
PPP G G GGG GG G G GG
Sbjct: 111 PPPPPPACGGGCGGGGGGCGGGCGGGGGGGCGGGGGGGCGGGGGGCGGGGGGCGGGGGGC 170
Query: 230 GGPXAPXSGGXGGXG 186
GG GG GG G
Sbjct: 171 GGGGGGGCGGGGGGG 185
Score = 28.7 bits (61), Expect = 6.7
Identities = 21/68 (30%), Positives = 21/68 (30%)
Frame = -2
Query: 371 GAGNRXXEXVGGGXXGGXXXDGXXKXAXGXXAPRXXGGAXXREXRXXGGPXAPXSGGXGG 192
G G GGG GG G A P GG GG GG GG
Sbjct: 86 GGGGGGCGGGGGGCGGGGGCGGGC--APPPPPPACGGGCGGGGGGCGGGCGGGGGGGCGG 143
Query: 191 XGGXXXXG 168
GG G
Sbjct: 144 GGGGGCGG 151
Score = 28.3 bits (60), Expect = 8.9
Identities = 24/82 (29%), Positives = 24/82 (29%)
Frame = -2
Query: 413 PPPPGXEXXXKXXPGAGNRXXEXVGGGXXGGXXXDGXXKXAXGXXAPRXXGGAXXREXRX 234
PPPP G G GGG GG G G GG
Sbjct: 56 PPPPACGGGC----GGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGCGGGCAP 111
Query: 233 XGGPXAPXSGGXGGXGGXXXXG 168
P A GG GG GG G
Sbjct: 112 PPPPPA-CGGGCGGGGGGCGGG 132
Score = 28.3 bits (60), Expect = 8.9
Identities = 21/77 (27%), Positives = 21/77 (27%)
Frame = -2
Query: 413 PPPPGXEXXXKXXPGAGNRXXEXVGGGXXGGXXXDGXXKXAXGXXAPRXXGGAXXREXRX 234
PPPP G G GGG G G G GG
Sbjct: 111 PPPPPPACGGGCGGGGGGCGGGCGGGGGGGCGGGGGGGCGGGGGGCGGGGGGCGGGGGGC 170
Query: 233 XGGPXAPXSGGXGGXGG 183
GG GG GG G
Sbjct: 171 GGGGGGGCGGGGGGGCG 187
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical
protein W01B6.7 protein.
Length = 301
Score = 31.1 bits (67), Expect = 1.3
Identities = 20/77 (25%), Positives = 20/77 (25%)
Frame = -2
Query: 413 PPPPGXEXXXKXXPGAGNRXXEXVGGGXXGGXXXDGXXKXAXGXXAPRXXGGAXXREXRX 234
PP P PG G G G A AP GG
Sbjct: 154 PPGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAPGGPGEPGASE 213
Query: 233 XGGPXAPXSGGXGGXGG 183
GGP P G G G
Sbjct: 214 QGGPGEPGPAGPPGPAG 230
Score = 29.9 bits (64), Expect = 2.9
Identities = 30/116 (25%), Positives = 30/116 (25%)
Frame = -1
Query: 921 PXPGGXPRXPXXXXGGGXXXGPANRGXXGXTXGXXPXXXXXXXXXXXXXXXXXXXXGAAA 742
P P G P P G G P G G G A
Sbjct: 167 PGPDGNPGSPAGPSGPGPAGPPGPAGPAG-NDGAPGAPGGPGEPGASEQGGPGEPGPAGP 225
Query: 741 XXQXGPRAGXGXPXRGGGGXXGKXRKRGAAPXXXXGXXRXAXAXGEGPGXXPXPGG 574
GP G P GG G G GAA A GPG PGG
Sbjct: 226 PGPAGPAGNDGAPGTGGPGPAGPKGPPGAA------GAPGADGNPGGPGTAGKPGG 275
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 31.1 bits (67), Expect = 1.3
Identities = 20/77 (25%), Positives = 20/77 (25%)
Frame = -2
Query: 413 PPPPGXEXXXKXXPGAGNRXXEXVGGGXXGGXXXDGXXKXAXGXXAPRXXGGAXXREXRX 234
PP P PG G G G A AP GG
Sbjct: 154 PPGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAPGGPGEPGASE 213
Query: 233 XGGPXAPXSGGXGGXGG 183
GGP P G G G
Sbjct: 214 QGGPGEPGPAGPPGPAG 230
Score = 29.9 bits (64), Expect = 2.9
Identities = 30/116 (25%), Positives = 30/116 (25%)
Frame = -1
Query: 921 PXPGGXPRXPXXXXGGGXXXGPANRGXXGXTXGXXPXXXXXXXXXXXXXXXXXXXXGAAA 742
P P G P P G G P G G G A
Sbjct: 167 PGPDGNPGSPAGPSGPGPAGPPGPAGPAG-NDGAPGAPGGPGEPGASEQGGPGEPGPAGP 225
Query: 741 XXQXGPRAGXGXPXRGGGGXXGKXRKRGAAPXXXXGXXRXAXAXGEGPGXXPXPGG 574
GP G P GG G G GAA A GPG PGG
Sbjct: 226 PGPAGPAGNDGAPGTGGPGPAGPKGPPGAA------GAPGADGNPGGPGTAGKPGG 275
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 2 (col-2) gene, complete
cds. ).
Length = 301
Score = 31.1 bits (67), Expect = 1.3
Identities = 20/77 (25%), Positives = 20/77 (25%)
Frame = -2
Query: 413 PPPPGXEXXXKXXPGAGNRXXEXVGGGXXGGXXXDGXXKXAXGXXAPRXXGGAXXREXRX 234
PP P PG G G G A AP GG
Sbjct: 154 PPGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAPGGPGEPGASE 213
Query: 233 XGGPXAPXSGGXGGXGG 183
GGP P G G G
Sbjct: 214 QGGPGEPGPAGPPGPAG 230
Score = 29.9 bits (64), Expect = 2.9
Identities = 30/116 (25%), Positives = 30/116 (25%)
Frame = -1
Query: 921 PXPGGXPRXPXXXXGGGXXXGPANRGXXGXTXGXXPXXXXXXXXXXXXXXXXXXXXGAAA 742
P P G P P G G P G G G A
Sbjct: 167 PGPDGNPGSPAGPSGPGPAGPPGPAGPAG-NDGAPGAPGGPGEPGASEQGGPGEPGPAGP 225
Query: 741 XXQXGPRAGXGXPXRGGGGXXGKXRKRGAAPXXXXGXXRXAXAXGEGPGXXPXPGG 574
GP G P GG G G GAA A GPG PGG
Sbjct: 226 PGPAGPAGNDGAPGTGGPGPAGPKGPPGAA------GAPGADGNPGGPGTAGKPGG 275
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 31.1 bits (67), Expect = 1.3
Identities = 20/77 (25%), Positives = 20/77 (25%)
Frame = -2
Query: 413 PPPPGXEXXXKXXPGAGNRXXEXVGGGXXGGXXXDGXXKXAXGXXAPRXXGGAXXREXRX 234
PP P PG G G G A AP GG
Sbjct: 154 PPGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAPGGPGEPGASE 213
Query: 233 XGGPXAPXSGGXGGXGG 183
GGP P G G G
Sbjct: 214 QGGPGEPGPAGPPGPAG 230
Score = 29.9 bits (64), Expect = 2.9
Identities = 30/116 (25%), Positives = 30/116 (25%)
Frame = -1
Query: 921 PXPGGXPRXPXXXXGGGXXXGPANRGXXGXTXGXXPXXXXXXXXXXXXXXXXXXXXGAAA 742
P P G P P G G P G G G A
Sbjct: 167 PGPDGNPGSPAGPSGPGPAGPPGPAGPAG-NDGAPGAPGGPGEPGASEQGGPGEPGPAGP 225
Query: 741 XXQXGPRAGXGXPXRGGGGXXGKXRKRGAAPXXXXGXXRXAXAXGEGPGXXPXPGG 574
GP G P GG G G GAA A GPG PGG
Sbjct: 226 PGPAGPAGNDGAPGTGGPGPAGPKGPPGAA------GAPGADGNPGGPGTAGKPGG 275
>AC006743-4|AAF60502.1| 291|Caenorhabditis elegans Collagen protein
109 protein.
Length = 291
Score = 31.1 bits (67), Expect = 1.3
Identities = 21/77 (27%), Positives = 22/77 (28%), Gaps = 2/77 (2%)
Frame = -1
Query: 408 PPGXGXPXXTXPXGGQPXKXGGXGRXXGRG--GPXWXXKXRXXPXRXPGXXRSXPPGXPX 235
PPG P GQP + G GR G GP PG P
Sbjct: 141 PPGPPGPQGPTGNSGQPGRPGNPGRPGSPGTPGPVGPNGASGDSGAPGNDGEKGEPGRPA 200
Query: 234 GGXPXXPXXWGGXGXRG 184
P P G G G
Sbjct: 201 QSTPSTPGEPGNPGDAG 217
>Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical
protein T04F8.8 protein.
Length = 165
Score = 30.3 bits (65), Expect = 2.2
Identities = 17/46 (36%), Positives = 19/46 (41%)
Frame = -3
Query: 538 GPPPXNGXPPRXGGGXXGGGXKRXPXXXXGPKXXTXRXSXXDPPPR 401
GPPP +G R GG GGG R P P +P PR
Sbjct: 69 GPPPFDGGYNRPYGGGGGGGYGR-PQGYVPPPPPPPTQPEPEPEPR 113
>U64609-7|AAB04604.3| 373|Caenorhabditis elegans Sperm-specific
family, class qprotein 4 protein.
Length = 373
Score = 30.3 bits (65), Expect = 2.2
Identities = 22/83 (26%), Positives = 23/83 (27%), Gaps = 1/83 (1%)
Frame = -2
Query: 413 PPPPGXEXXXKXXPGAGNRXXEXVGGGXXGGXXXDGXXKXAXGXXAPRXXGGAXXREXRX 234
PPPP G VG G GG P GG +
Sbjct: 281 PPPPSGSAMGGGGGGGATSAYFGVGSGAMGGGGAGAQSAYFGVGGGPVGGGGGGAKSGGG 340
Query: 233 XGG-PXAPXSGGXGGXGGXXXXG 168
GG P G GG GG G
Sbjct: 341 GGGIPGQSVYMGAGGGGGGGGGG 363
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 30.3 bits (65), Expect = 2.2
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +1
Query: 184 PPXPPXPPXXGAXGPPXXRXSRXXAPP 264
PP PP PP GPP R PP
Sbjct: 246 PPGPPGPPTRRPPGPPGPPTRRPPGPP 272
Score = 28.7 bits (61), Expect = 6.7
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = +1
Query: 169 PXXXXPPXPPXPPXXGAXGPPXXRXSRXXAPPXXR 273
P PP PP G GPP R PP R
Sbjct: 244 PGPPGPPGPPTRRPPGPPGPPTRRPPGPPGPPTRR 278
Score = 28.3 bits (60), Expect = 8.9
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = +1
Query: 169 PXXXXPPXPPXPPXXGAXGPPXXRXSRXXAPPXXRGAXXP 288
P PP PP PP GPP R PP R P
Sbjct: 238 PSPSDPPGPPGPP-----GPPTRRPPGPPGPPTRRPPGPP 272
>Z95621-2|CAB09131.1| 330|Caenorhabditis elegans Hypothetical
protein ZK863.2 protein.
Length = 330
Score = 29.9 bits (64), Expect = 2.9
Identities = 17/37 (45%), Positives = 17/37 (45%)
Frame = -2
Query: 620 PXPXGRARGXPRXPGXPPXTXPGGGEXRAPAXERXPP 510
P P G A G P PG P PGGG PA PP
Sbjct: 171 PGPAGPA-GPPGPPG--PDGAPGGGSGPGPAGPAGPP 204
Score = 28.7 bits (61), Expect = 6.7
Identities = 19/59 (32%), Positives = 19/59 (32%), Gaps = 1/59 (1%)
Frame = +2
Query: 557 GXSPXGPPGXGXXPG-PSPXAXAXLXXPXXXXGAAPLFRXFPXXPPPPLXGXPXPARGP 730
G P GPPG PG P A P P PP P G P GP
Sbjct: 138 GAGPPGPPGPDGNPGAPGNDGEAGSPGTRSISSPGPAGPAGPPGPPGP-DGAPGGGSGP 195
>Z78019-9|CAB01457.1| 330|Caenorhabditis elegans Hypothetical
protein ZK863.2 protein.
Length = 330
Score = 29.9 bits (64), Expect = 2.9
Identities = 17/37 (45%), Positives = 17/37 (45%)
Frame = -2
Query: 620 PXPXGRARGXPRXPGXPPXTXPGGGEXRAPAXERXPP 510
P P G A G P PG P PGGG PA PP
Sbjct: 171 PGPAGPA-GPPGPPG--PDGAPGGGSGPGPAGPAGPP 204
Score = 28.7 bits (61), Expect = 6.7
Identities = 19/59 (32%), Positives = 19/59 (32%), Gaps = 1/59 (1%)
Frame = +2
Query: 557 GXSPXGPPGXGXXPG-PSPXAXAXLXXPXXXXGAAPLFRXFPXXPPPPLXGXPXPARGP 730
G P GPPG PG P A P P PP P G P GP
Sbjct: 138 GAGPPGPPGPDGNPGAPGNDGEAGSPGTRSISSPGPAGPAGPPGPPGP-DGAPGGGSGP 195
>Z67738-4|CAJ43444.1| 279|Caenorhabditis elegans Hypothetical
protein W03G11.1b protein.
Length = 279
Score = 29.9 bits (64), Expect = 2.9
Identities = 22/75 (29%), Positives = 24/75 (32%)
Frame = -1
Query: 408 PPGXGXPXXTXPXGGQPXKXGGXGRXXGRGGPXWXXKXRXXPXRXPGXXRSXPPGXPXGG 229
PPG P G+P + G GR RG P P PG P GG
Sbjct: 142 PPGRPGPDGENGGAGEPGRDGLAGRPGARGSP-----GPRGPSGNPGADGPAGQLGPQGG 196
Query: 228 XPXXPXXWGGXGXRG 184
P G G G
Sbjct: 197 SNVAPSPAGEPGAPG 211
>Z67738-3|CAA91544.2| 332|Caenorhabditis elegans Hypothetical
protein W03G11.1a protein.
Length = 332
Score = 29.9 bits (64), Expect = 2.9
Identities = 22/75 (29%), Positives = 24/75 (32%)
Frame = -1
Query: 408 PPGXGXPXXTXPXGGQPXKXGGXGRXXGRGGPXWXXKXRXXPXRXPGXXRSXPPGXPXGG 229
PPG P G+P + G GR RG P P PG P GG
Sbjct: 195 PPGRPGPDGENGGAGEPGRDGLAGRPGARGSP-----GPRGPSGNPGADGPAGQLGPQGG 249
Query: 228 XPXXPXXWGGXGXRG 184
P G G G
Sbjct: 250 SNVAPSPAGEPGAPG 264
>AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical
protein Y56A3A.27 protein.
Length = 759
Score = 29.9 bits (64), Expect = 2.9
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = -3
Query: 547 GXXGPPPXNGXPPRXGGGXXGGGXKRXPXXXXGP 446
G G P G PPR GG GGG P P
Sbjct: 616 GGPGGPGGGGGPPRGPGGGGGGGPTGPPAPPKPP 649
>AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA
topoisomerase III protein.
Length = 759
Score = 29.9 bits (64), Expect = 2.9
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = -3
Query: 547 GXXGPPPXNGXPPRXGGGXXGGGXKRXPXXXXGP 446
G G P G PPR GG GGG P P
Sbjct: 616 GGPGGPGGGGGPPRGPGGGGGGGPTGPPAPPKPP 649
>AF047659-10|AAC04430.1| 798|Caenorhabditis elegans Hypothetical
protein K07H8.10 protein.
Length = 798
Score = 29.9 bits (64), Expect = 2.9
Identities = 14/35 (40%), Positives = 15/35 (42%)
Frame = -2
Query: 287 GXXAPRXXGGAXXREXRXXGGPXAPXSGGXGGXGG 183
G +PR GG R R G P GG G GG
Sbjct: 2 GFDSPRGRGGGGFRGGRGGGSGFTPRGGGGGFRGG 36
>Z81592-1|CAB04725.1| 695|Caenorhabditis elegans Hypothetical
protein T16G1.1 protein.
Length = 695
Score = 29.5 bits (63), Expect = 3.9
Identities = 17/53 (32%), Positives = 18/53 (33%), Gaps = 1/53 (1%)
Frame = -3
Query: 523 NGXPPRXGGGXXGGGXKRXPXXXXGP-KXXTXRXSXXDPPPRAGXAXXNXPXG 368
NG PPR G G G P G PPPR+ A N G
Sbjct: 501 NGPPPRNNGNNNGNGRPMKPPSSSGSGSNRRSGPPPPPPPPRSSGANGNRNGG 553
>Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical
protein T21B4.2 protein.
Length = 312
Score = 29.5 bits (63), Expect = 3.9
Identities = 20/65 (30%), Positives = 20/65 (30%)
Frame = -3
Query: 556 PEXGXXGPPPXNGXPPRXGGGXXGGGXKRXPXXXXGPKXXTXRXSXXDPPPRAGXAXXNX 377
P G GPP PP GG G P P T PP G A
Sbjct: 196 PSGGAAGPP----GPPGPPGGPGNDGQPGGPGNPGAPGAVTEVPGQQGPPGPPGPAGPPG 251
Query: 376 PXGRA 362
P G A
Sbjct: 252 PAGNA 256
>Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical
protein F02D10.1 protein.
Length = 316
Score = 29.5 bits (63), Expect = 3.9
Identities = 39/150 (26%), Positives = 40/150 (26%), Gaps = 3/150 (2%)
Frame = -2
Query: 626 GXPXPXGRAR--GXPRXPGXPPXTXPGGGEXRAPAXERXPPAXRXXXXXXXXXXGXAPXX 453
G P P GR G P PG P G AP PP + P
Sbjct: 120 GPPGPGGRPGKPGTPGKPGAPGNPGASGKGAAAPCEPSTPPPCQ--PCPAGPPGPPGPDG 177
Query: 452 GAKEXNXPXXXXXPPPPGXEXXXKXXPGAGNRXXEXVGGGXXGGXXXDGXXKXAXGXXAP 273
E P P P PG G GG DG A G P
Sbjct: 178 TPGEPGGPGPAGSPAGPSG-PGPAGPPGPAGPPGNDGQPGQPGGPGQDG-ASSAGGEAGP 235
Query: 272 RXXGGAXXREXRXXGGPXA-PXSGGXGGXG 186
G A GP SG GG G
Sbjct: 236 ---GPAGPPGPAGPAGPDGQSGSGSAGGPG 262
Score = 29.5 bits (63), Expect = 3.9
Identities = 30/123 (24%), Positives = 36/123 (29%), Gaps = 3/123 (2%)
Frame = -1
Query: 921 PXPGGXPRXPXXXXGGGXXXGPANRGXXGXTXGXXPXXXXXXXXXXXXXXXXXXXXGAAA 742
P P G P P G GP+ G G P ++A
Sbjct: 173 PGPDGTPGEPGGPGPAGSPAGPSGPGPAGP---PGPAGPPGNDGQPGQPGGPGQDGASSA 229
Query: 741 XXQXGP-RAGXGXP--XRGGGGXXGKXRKRGAAPXXXXGXXRXAXAXGEGPGXXPXPGGP 571
+ GP AG P G G G G P G + G PG PG P
Sbjct: 230 GGEAGPGPAGPPGPAGPAGPDGQSGSGSAGGPGPKGPPGPAGQPGSDG-NPGTAGPPGNP 288
Query: 570 XGD 562
G+
Sbjct: 289 GGE 291
Score = 28.7 bits (61), Expect = 6.7
Identities = 26/93 (27%), Positives = 30/93 (32%), Gaps = 3/93 (3%)
Frame = -1
Query: 453 GGQRXXXXGXARXTPPPGXGXPXXTXPXGGQPXKXGGXGRXXGRGGPXWXXKXRXXPXR- 277
GG+ G PG P GG+P K G G+ G P K P
Sbjct: 103 GGEAAGGGGGCTGCCNPGPPGP------GGRPGKPGTPGKPGAPGNPGASGKGAAAPCEP 156
Query: 276 -XPGXXRSXPPGXP-XGGXPXXPXXWGGXGXRG 184
P + P G P G P GG G G
Sbjct: 157 STPPPCQPCPAGPPGPPGPDGTPGEPGGPGPAG 189
Score = 28.3 bits (60), Expect = 8.9
Identities = 28/119 (23%), Positives = 29/119 (24%)
Frame = -1
Query: 921 PXPGGXPRXPXXXXGGGXXXGPANRGXXGXTXGXXPXXXXXXXXXXXXXXXXXXXXGAAA 742
P P G P P G GP G G P
Sbjct: 164 PCPAGPPGPPGPDGTPGEPGGPGPAGSPAGPSGPGP---AGPPGPAGPPGNDGQPGQPGG 220
Query: 741 XXQXGPRAGXGXPXRGGGGXXGKXRKRGAAPXXXXGXXRXAXAXGEGPGXXPXPGGPXG 565
Q G + G G G G A P G A G GP P P G G
Sbjct: 221 PGQDGASSAGGEAGPGPAGPPGP-----AGPAGPDGQSGSGSAGGPGPKGPPGPAGQPG 274
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 29.5 bits (63), Expect = 3.9
Identities = 19/62 (30%), Positives = 19/62 (30%)
Frame = -2
Query: 371 GAGNRXXEXVGGGXXGGXXXDGXXKXAXGXXAPRXXGGAXXREXRXXGGPXAPXSGGXGG 192
G GN GG GG G G R GG GG GG GG
Sbjct: 71 GWGNNGGGGNWGGNGGGGNGGGGRGGGGGGGGGRGGGGGGRGGGGGGGGGRGGGGGGRGG 130
Query: 191 XG 186
G
Sbjct: 131 GG 132
>U55373-5|AAC25888.1| 289|Caenorhabditis elegans Collagen protein
140, isoform a protein.
Length = 289
Score = 29.5 bits (63), Expect = 3.9
Identities = 21/57 (36%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Frame = -1
Query: 729 GPRAGXGXPXRGG-GGXXGKXRKRGAAPXXXXGXXRXAXAXGEGPGXXPXPGGPXGD 562
GP G G P GG GG G + G P G G+ PG P P GP G+
Sbjct: 175 GPPGGPGGPGEGGDGGRPGNPGRPG--PAGPRGEPGTEYKPGQ-PG-RPGPPGPRGE 227
Score = 28.3 bits (60), Expect = 8.9
Identities = 15/32 (46%), Positives = 15/32 (46%), Gaps = 2/32 (6%)
Frame = -3
Query: 568 RXPPPEXGXXGPPPXNG--XPPRXGGGXXGGG 479
R PP E G GP NG PP GG G G
Sbjct: 153 RGPPGEVGPAGPSGDNGRKGPPGPPGGPGGPG 184
>U40802-12|AAK19014.2| 265|Caenorhabditis elegans Sperm-specific
family, class qprotein 3 protein.
Length = 265
Score = 29.5 bits (63), Expect = 3.9
Identities = 21/78 (26%), Positives = 22/78 (28%), Gaps = 1/78 (1%)
Frame = -2
Query: 413 PPPPGXEXXXKXXPGAGNRXXEXVGGGXXGGXXXDGXXKXAXGXXAPRXXGGAXXREXRX 234
PPPP G VG G GG P GG +
Sbjct: 175 PPPPSGSAMGGGGGGGATSAYFGVGSGAMGGGGAGAQSAYFGVGGGPVGGGGGGAKSGGG 234
Query: 233 XGG-PXAPXSGGXGGXGG 183
GG P G GG GG
Sbjct: 235 GGGIPGQSVYMGAGGGGG 252
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 29.5 bits (63), Expect = 3.9
Identities = 26/112 (23%), Positives = 30/112 (26%), Gaps = 4/112 (3%)
Frame = -3
Query: 568 RXPPPEXGXXGPPPXNGXPPRXGGGXXGGGXKRXPXXXXG----PKXXTXRXSXXDPPPR 401
R PPP G PPP P+ G G +R P G P T
Sbjct: 126 RPPPPPKGTGSPPPPPTGEPQDLSG-EGNASRRPPPPPKGTGSPPPPPTGEPQDLSTEGN 184
Query: 400 AGXAXXNXPXGRATGKXRXXGAARRAGXXXMAXKXAXXAXXXPGXXAEPPXG 245
A P G T G + A + G PP G
Sbjct: 185 ASRRPPPPPKGTGTPPPPPTGEPQDLSAEGYASRRPPPPPKGTGSPTPPPTG 236
Score = 28.3 bits (60), Expect = 8.9
Identities = 13/40 (32%), Positives = 15/40 (37%)
Frame = -3
Query: 568 RXPPPEXGXXGPPPXNGXPPRXGGGXXGGGXKRXPXXXXG 449
R PPP G PPP P+ G +R P G
Sbjct: 63 RPPPPPKGTGTPPPPPTGEPQDLSAEEGNASRRPPPPPKG 102
>Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical
protein H06A10.2 protein.
Length = 305
Score = 29.1 bits (62), Expect = 5.1
Identities = 25/98 (25%), Positives = 29/98 (29%), Gaps = 2/98 (2%)
Frame = +1
Query: 166 SPXXXXPPXPPXPPXXGAXGPPXXRXSRXXAPPXXRG--AXXPXAXFXXPSXXXPPXXPP 339
SP PP PP PP G GP + P + P P+ P PP
Sbjct: 180 SPAAPSPPGPPGPP--GPAGPAGNDGAAGTPGPDGPAGESTYPEPAGPGPAGPPGPAGPP 237
Query: 340 PTXSLXRLPAPGXXXXXXSXPGGGGXXXXXGXXXSLAP 453
APG PG G G + P
Sbjct: 238 GPDGASPTAAPG-AAGPPGPPGPAGAPGPDGNPGTAGP 274
Score = 28.3 bits (60), Expect = 8.9
Identities = 21/58 (36%), Positives = 22/58 (37%)
Frame = +2
Query: 557 GXSPXGPPGXGXXPGPSPXAXAXLXXPXXXXGAAPLFRXFPXXPPPPLXGXPXPARGP 730
G P GPPG PGP + P GAA P PP P G P P P
Sbjct: 224 GPGPAGPPGPAGPPGPDGAS------PTAAPGAAG-----PPGPPGP-AGAPGPDGNP 269
>Z95559-1|CAB08999.1| 289|Caenorhabditis elegans Hypothetical
protein Y41E3.2 protein.
Length = 289
Score = 29.1 bits (62), Expect = 5.1
Identities = 38/156 (24%), Positives = 45/156 (28%), Gaps = 7/156 (4%)
Frame = -3
Query: 700 QGGXGXXGKXPKKGG-GAXXXPGAXEXXXXXXXXXXXXXXXXXXXRXPPPEXGXXGPPPX 524
QG G GK K G GA PG + PP G G P
Sbjct: 95 QGPQGTPGKPGKPGKPGAPGQPGTPGRPPQQPCEPTTPPPCQPCPQGPPGPPGQPGIPGD 154
Query: 523 NGXP----PRXGGGXXGGGXKRXPXXXXGPKXXTXRXSXXDPPPRAGXAXXN--XPXGRA 362
NG P P+ G + P GP P ++ A P G+A
Sbjct: 155 NGPPGEQGPKGPDAAPGEPGPKGPIGPPGPPGQAGAPGEPGSPAKSEPAVPGPPGPPGQA 214
Query: 361 TGKXRXXGAARRAGXXXMAXKXAXXAXXXPGXXAEP 254
G+ G G A A PG EP
Sbjct: 215 -GQQGPPGPPGSNGID--GAPGAPGAKGEPGTPGEP 247
Score = 28.7 bits (61), Expect = 6.7
Identities = 22/74 (29%), Positives = 26/74 (35%)
Frame = -1
Query: 405 PGXGXPXXTXPXGGQPXKXGGXGRXXGRGGPXWXXKXRXXPXRXPGXXRSXPPGXPXGGX 226
PG P T G+P K G G+ G P P + PPG P G
Sbjct: 92 PGPQGPQGTPGKPGKPGKPGAPGQPGTPGRPPQQPCEPTTPPPCQPCPQG-PPGPP--GQ 148
Query: 225 PXXPXXWGGXGXRG 184
P P G G +G
Sbjct: 149 PGIPGDNGPPGEQG 162
>Z74042-8|CAA98525.1| 299|Caenorhabditis elegans Hypothetical
protein T11F9.9 protein.
Length = 299
Score = 29.1 bits (62), Expect = 5.1
Identities = 21/82 (25%), Positives = 24/82 (29%), Gaps = 5/82 (6%)
Frame = -1
Query: 414 TPPPGXGXPXXTXPXGGQPXKXGGXGRXXGRGGPXWXXKXRXXPXRXPGXXRSXP----- 250
TPPP P G P G G G P + + P P
Sbjct: 141 TPPPCQPCPQGPPGPPGPPGPSGDAGSNGNPGSPGQDGQPGAPGNKGPSGQNGNPGAPGA 200
Query: 249 PGXPXGGXPXXPXXWGGXGXRG 184
PG P P P G G +G
Sbjct: 201 PGQPGQDAPSEPITPGAPGPQG 222
>Z49131-6|CAA88979.1| 297|Caenorhabditis elegans Hypothetical
protein ZC373.7 protein.
Length = 297
Score = 29.1 bits (62), Expect = 5.1
Identities = 26/85 (30%), Positives = 28/85 (32%), Gaps = 3/85 (3%)
Frame = -1
Query: 429 GXARXTPPPGX-GXPXXTXPXG--GQPXKXGGXGRXXGRGGPXWXXKXRXXPXRXPGXXR 259
G A P G G P G GQP G G GGP + R G
Sbjct: 161 GPAGPKGPDGRPGQPGSAGHPGAPGQPGSKGNNGAPGAAGGPGQPGRPGKDGQR--GKGS 218
Query: 258 SXPPGXPXGGXPXXPXXWGGXGXRG 184
+ PG P P P GG G G
Sbjct: 219 AGAPGAPGKAGPAGPA--GGPGNNG 241
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 29.1 bits (62), Expect = 5.1
Identities = 18/69 (26%), Positives = 20/69 (28%)
Frame = -2
Query: 371 GAGNRXXEXVGGGXXGGXXXDGXXKXAXGXXAPRXXGGAXXREXRXXGGPXAPXSGGXGG 192
G GN GGG GG G G A G G + G G
Sbjct: 75 GGGNTCGSGFGGGSTGGSPYGGASSGFGGSTATSGFGSGEKSSAFGGSGGFGGSATGFGS 134
Query: 191 XGGXXXXGD 165
GG G+
Sbjct: 135 GGGSFGGGN 143
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 29.1 bits (62), Expect = 5.1
Identities = 19/67 (28%), Positives = 20/67 (29%), Gaps = 1/67 (1%)
Frame = +1
Query: 169 PXXXXPPXPPXPPXXGAXGPPXXRXSRXXAPPXXRGAXXPXAXFXXPSXXXPPXXP-PPT 345
P PP PP PP P PP G A P PP P
Sbjct: 605 PHAVPPPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPPPPSGAGGPA 664
Query: 346 XSLXRLP 366
L +LP
Sbjct: 665 SVLAKLP 671
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 29.1 bits (62), Expect = 5.1
Identities = 19/67 (28%), Positives = 20/67 (29%), Gaps = 1/67 (1%)
Frame = +1
Query: 169 PXXXXPPXPPXPPXXGAXGPPXXRXSRXXAPPXXRGAXXPXAXFXXPSXXXPPXXP-PPT 345
P PP PP PP P PP G A P PP P
Sbjct: 431 PHAVPPPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPPPPSGAGGPA 490
Query: 346 XSLXRLP 366
L +LP
Sbjct: 491 SVLAKLP 497
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 29.1 bits (62), Expect = 5.1
Identities = 18/69 (26%), Positives = 20/69 (28%)
Frame = -2
Query: 371 GAGNRXXEXVGGGXXGGXXXDGXXKXAXGXXAPRXXGGAXXREXRXXGGPXAPXSGGXGG 192
G GN GGG GG G G A G G + G G
Sbjct: 75 GGGNTCGSGFGGGSTGGSPYGGASSGFGGSTATSGFGSGEKSSAFGGSGGFGGSATGFGS 134
Query: 191 XGGXXXXGD 165
GG G+
Sbjct: 135 GGGSFGGGN 143
>AF022985-12|AAB69959.1| 319|Caenorhabditis elegans Collagen
protein 143 protein.
Length = 319
Score = 29.1 bits (62), Expect = 5.1
Identities = 28/126 (22%), Positives = 35/126 (27%), Gaps = 6/126 (4%)
Frame = -1
Query: 921 PXPGGXPRXPXXXXGGGXXXGPANRGXXGXTXGXXPXXXXXXXXXXXXXXXXXXXXGAAA 742
P P G P P G PA G G P
Sbjct: 139 PGPAGPPGAPGPKGNNGQPGAPAQSGGRGPPGPRGPAGDAGSPGQPGHPGSPGNPGRGGQ 198
Query: 741 XXQXGPRAGXGXPXRGGGGXXGKXRKRGAA----PXXXXG-XXRXAXAXGEG-PGXXPXP 580
+ P A +G G G+ + G A P G + + +G PG P
Sbjct: 199 RSRGTPGASGRPGPQGPAGAPGQPGRSGGAGTPGPQGPPGPSGQPGHSGNDGVPGTPGNP 258
Query: 579 GGPXGD 562
G P GD
Sbjct: 259 GAPGGD 264
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 29.1 bits (62), Expect = 5.1
Identities = 18/69 (26%), Positives = 20/69 (28%)
Frame = -2
Query: 371 GAGNRXXEXVGGGXXGGXXXDGXXKXAXGXXAPRXXGGAXXREXRXXGGPXAPXSGGXGG 192
G GN GGG GG G G A G G + G G
Sbjct: 75 GGGNTCGSGFGGGSTGGSPYGGASSGFGGSTATSGFGSGEKSSAFGGSGGFGGSATGFGS 134
Query: 191 XGGXXXXGD 165
GG G+
Sbjct: 135 GGGSFGGGN 143
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 28.7 bits (61), Expect = 6.7
Identities = 17/54 (31%), Positives = 17/54 (31%), Gaps = 1/54 (1%)
Frame = +1
Query: 184 PPXPPXPPXXG-AXGPPXXRXSRXXAPPXXRGAXXPXAXFXXPSXXXPPXXPPP 342
PP PP P G A PP AP P P P PPP
Sbjct: 488 PPPPPMPSINGHAPNPPPPPPLLGIAPMSTNAPPPPPMPGMAPLSTGAPTPPPP 541
>Z74036-2|CAA98487.1| 266|Caenorhabditis elegans Hypothetical
protein F55C10.3 protein.
Length = 266
Score = 28.7 bits (61), Expect = 6.7
Identities = 21/82 (25%), Positives = 24/82 (29%), Gaps = 5/82 (6%)
Frame = -1
Query: 414 TPPPGXGXPXXTXPXGGQPXKXGGXGRXXGRGGPXWXXKXRXXPXRXPGXXRSXP----- 250
TPPP P G P G G G P + + P P
Sbjct: 108 TPPPCQPCPQGPPGPPGPPGPSGDAGGNGNPGSPGQDGQPGAPGNKGPSGPNGNPGAPGA 167
Query: 249 PGXPXGGXPXXPXXWGGXGXRG 184
PG P P P G G +G
Sbjct: 168 PGQPGQDAPSEPITPGAPGPQG 189
Score = 28.3 bits (60), Expect = 8.9
Identities = 22/74 (29%), Positives = 24/74 (32%)
Frame = -1
Query: 405 PGXGXPXXTXPXGGQPXKXGGXGRXXGRGGPXWXXKXRXXPXRXPGXXRSXPPGXPXGGX 226
PG P T G+P K G G G P P + PPG P G
Sbjct: 69 PGAAGPAGTPGKPGRPGKPGAPGLPGNPGHPPQQPCDPITPPPCQPCPQG-PPGPP--GP 125
Query: 225 PXXPXXWGGXGXRG 184
P GG G G
Sbjct: 126 PGPSGDAGGNGNPG 139
>Z74036-1|CAA98486.1| 299|Caenorhabditis elegans Hypothetical
protein F55C10.2 protein.
Length = 299
Score = 28.7 bits (61), Expect = 6.7
Identities = 21/82 (25%), Positives = 24/82 (29%), Gaps = 5/82 (6%)
Frame = -1
Query: 414 TPPPGXGXPXXTXPXGGQPXKXGGXGRXXGRGGPXWXXKXRXXPXRXPGXXRSXP----- 250
TPPP P G P G G G P + + P P
Sbjct: 141 TPPPCQPCPQGPPGPPGPPGPSGDAGGNGNPGSPGQDGQPGAPGNKGPSGPNGNPGAPGA 200
Query: 249 PGXPXGGXPXXPXXWGGXGXRG 184
PG P P P G G +G
Sbjct: 201 PGQPGQDAPSEPITPGAPGPQG 222
Score = 28.3 bits (60), Expect = 8.9
Identities = 22/74 (29%), Positives = 24/74 (32%)
Frame = -1
Query: 405 PGXGXPXXTXPXGGQPXKXGGXGRXXGRGGPXWXXKXRXXPXRXPGXXRSXPPGXPXGGX 226
PG P T G+P K G G G P P + PPG P G
Sbjct: 102 PGAAGPAGTPGKPGRPGKPGAPGLPGNPGRPPQQPCDPITPPPCQPCPQG-PPGPP--GP 158
Query: 225 PXXPXXWGGXGXRG 184
P GG G G
Sbjct: 159 PGPSGDAGGNGNPG 172
>Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical
protein C53B4.5 protein.
Length = 289
Score = 28.7 bits (61), Expect = 6.7
Identities = 21/59 (35%), Positives = 21/59 (35%), Gaps = 4/59 (6%)
Frame = +2
Query: 566 PXGPPGXGXXPGP----SPXAXAXLXXPXXXXGAAPLFRXFPXXPPPPLXGXPXPARGP 730
P GPPG PGP P P G A P PP P G P PA P
Sbjct: 139 PEGPPGPAGPPGPQGNKGPLGPPGPPGPEGPNGTAG--NKGPAGPPGP-GGKPGPAGPP 194
>U61948-2|AAB03143.2| 345|Caenorhabditis elegans Collagen protein
14 protein.
Length = 345
Score = 28.7 bits (61), Expect = 6.7
Identities = 23/74 (31%), Positives = 23/74 (31%), Gaps = 3/74 (4%)
Frame = -1
Query: 396 GXPXXTXPXG--GQPXKXGGXGRXXGRGGPXWXXKXRXXPXRXPGXXRSXPPGXP-XGGX 226
G P P G G P G GR G P R R PPG P G
Sbjct: 231 GKPGDQGPRGPPGIPGAPGQPGRPGPPGEPGTYKTEVGPAGRAGAPGRPGPPGQPGPAGP 290
Query: 225 PXXPXXWGGXGXRG 184
P GG G G
Sbjct: 291 PGENGKGGGQGPSG 304
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 28.7 bits (61), Expect = 6.7
Identities = 15/54 (27%), Positives = 16/54 (29%)
Frame = +1
Query: 184 PPXPPXPPXXGAXGPPXXRXSRXXAPPXXRGAXXPXAXFXXPSXXXPPXXPPPT 345
PP PP G PP R P R PS P PP+
Sbjct: 124 PPPPPRKSRAGGSSPPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPS 177
>M25480-1|AAA27986.1| 326|Caenorhabditis elegans collagen protein.
Length = 326
Score = 28.7 bits (61), Expect = 6.7
Identities = 23/74 (31%), Positives = 23/74 (31%), Gaps = 3/74 (4%)
Frame = -1
Query: 396 GXPXXTXPXG--GQPXKXGGXGRXXGRGGPXWXXKXRXXPXRXPGXXRSXPPGXP-XGGX 226
G P P G G P G GR G P R R PPG P G
Sbjct: 212 GKPGDQGPRGPPGIPGAPGQPGRPGPPGEPGTYKTEVGPAGRAGAPGRPGPPGQPGPAGP 271
Query: 225 PXXPXXWGGXGXRG 184
P GG G G
Sbjct: 272 PGENGKGGGQGPSG 285
>AF308860-1|AAG45416.1| 1475|Caenorhabditis elegans SOP-3 protein.
Length = 1475
Score = 28.7 bits (61), Expect = 6.7
Identities = 25/76 (32%), Positives = 27/76 (35%)
Frame = +1
Query: 184 PPXPPXPPXXGAXGPPXXRXSRXXAPPXXRGAXXPXAXFXXPSXXXPPXXPPPTXSLXRL 363
PP P PP GPP AP G+ P P PP PPP + R
Sbjct: 1280 PPLQPPPPPQ-MTGPPIGIYPGPPAPGNLPGSSRPSGNRKQP---LPP--PPP---MIRG 1330
Query: 364 PAPGXXXXXXSXPGGG 411
P P S GGG
Sbjct: 1331 PPPDQMYRDRSGGGGG 1346
>AF025467-5|AAB71038.2| 1115|Caenorhabditis elegans Hypothetical
protein R148.3a protein.
Length = 1115
Score = 28.7 bits (61), Expect = 6.7
Identities = 17/55 (30%), Positives = 19/55 (34%)
Frame = +2
Query: 566 PXGPPGXGXXPGPSPXAXAXLXXPXXXXGAAPLFRXFPXXPPPPLXGXPXPARGP 730
P P P P+P A A P L P PPPP P A+ P
Sbjct: 341 PDAPKVEEPEPAPTP-APAPAEDPVVTPAPEELTTPPPPAPPPPAPAVPEEAQAP 394
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 28.7 bits (61), Expect = 6.7
Identities = 23/82 (28%), Positives = 24/82 (29%)
Frame = +2
Query: 170 PXXPXPRXPXPPQXXGX*GXPPXGXPGGXLRXSPGXRXGXXRXFXXHXGPPRPXXRPXPP 349
P P P PP G PP P P G R F P P PP
Sbjct: 297 PPPPRGHFPPPPPHFMGRGMPPPFMP-----PPPHFGMGPPRGFMPPPHPMMFRGGPYPP 351
Query: 350 XFXGCPPXGXVXXGXPXPGGGV 415
F PP P GG +
Sbjct: 352 FFPPPPPHFMRPSSPPTDGGPI 373
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 28.7 bits (61), Expect = 6.7
Identities = 23/82 (28%), Positives = 24/82 (29%)
Frame = +2
Query: 170 PXXPXPRXPXPPQXXGX*GXPPXGXPGGXLRXSPGXRXGXXRXFXXHXGPPRPXXRPXPP 349
P P P PP G PP P P G R F P P PP
Sbjct: 297 PPPPRGHFPPPPPHFMGRGMPPPFMP-----PPPHFGMGPPRGFMPPPHPMMFRGGPYPP 351
Query: 350 XFXGCPPXGXVXXGXPXPGGGV 415
F PP P GG +
Sbjct: 352 FFPPPPPHFMRPSSPPTDGGPI 373
>AC024201-13|AAF36027.2| 1475|Caenorhabditis elegans Suppressor of
pal-1 protein 3,isoform a protein.
Length = 1475
Score = 28.7 bits (61), Expect = 6.7
Identities = 25/76 (32%), Positives = 27/76 (35%)
Frame = +1
Query: 184 PPXPPXPPXXGAXGPPXXRXSRXXAPPXXRGAXXPXAXFXXPSXXXPPXXPPPTXSLXRL 363
PP P PP GPP AP G+ P P PP PPP + R
Sbjct: 1280 PPLQPPPPPQ-MTGPPIGIYPGPPAPGNLPGSSRPSGNRKQP---LPP--PPP---MIRG 1330
Query: 364 PAPGXXXXXXSXPGGG 411
P P S GGG
Sbjct: 1331 PPPDQMYRDRSGGGGG 1346
>Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical
protein F54B11.2 protein.
Length = 304
Score = 25.8 bits (54), Expect(2) = 7.9
Identities = 18/57 (31%), Positives = 21/57 (36%), Gaps = 1/57 (1%)
Frame = +2
Query: 563 SPXGPPGXGXXPGPS-PXAXAXLXXPXXXXGAAPLFRXFPXXPPPPLXGXPXPARGP 730
SP GPPG GP+ A P G + +P P G P PA P
Sbjct: 184 SPPGPPGPSGPAGPAGNDGAAGTPGPDGPAGES----TYPEPAAPGPAGPPGPAGPP 236
Score = 21.0 bits (42), Expect(2) = 7.9
Identities = 10/26 (38%), Positives = 10/26 (38%)
Frame = +2
Query: 845 PRLAGPXXXPPPXXXXGXRGXPPGXG 922
P AGP P P G G P G
Sbjct: 247 PGAAGPPGPPGPAGAPGPDGNPGTAG 272
>Z82268-5|CAB05195.1| 304|Caenorhabditis elegans Hypothetical
protein F52B11.4 protein.
Length = 304
Score = 28.3 bits (60), Expect = 8.9
Identities = 17/58 (29%), Positives = 21/58 (36%), Gaps = 1/58 (1%)
Frame = -3
Query: 559 PPEXGXXGPPPXNGXPPRXGG-GXXGGGXKRXPXXXXGPKXXTXRXSXXDPPPRAGXA 389
P + G GPP G P GG G G ++ P G P +AG A
Sbjct: 222 PGQAGPQGPPGPAGSPGAPGGPGQPGAPGQKGPSGAPGQPGADGNPGAPGQPGQAGGA 279
>Z81143-1|CAB03513.1| 381|Caenorhabditis elegans Hypothetical
protein ZK265.2 protein.
Length = 381
Score = 28.3 bits (60), Expect = 8.9
Identities = 22/58 (37%), Positives = 25/58 (43%)
Frame = -1
Query: 735 QXGPRAGXGXPXRGGGGXXGKXRKRGAAPXXXXGXXRXAXAXGEGPGXXPXPGGPXGD 562
Q GP G P GG G G+ + G G A A G+ PG P P GP GD
Sbjct: 218 QPGPVGAPGAP--GGPGRDGEPGENGQ--DGQQGPEGPAGADGQ-PGH-PGPDGPSGD 269
>Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical
protein F12F6.6 protein.
Length = 1126
Score = 28.3 bits (60), Expect = 8.9
Identities = 26/80 (32%), Positives = 28/80 (35%), Gaps = 3/80 (3%)
Frame = -1
Query: 408 PPGXGXPXXTXPXGGQPXKXGGXGRXX-GRGGPXWXXKXRXXPXRXPGXXRSXPPGXPXG 232
P G G P P P G G G+GGP PG S PPG P
Sbjct: 260 PQGPGMPRAFPPGASAPVAPGMPGAFPPGQGGPGM-----------PG---SFPPGAPGP 305
Query: 231 GXPXXPXXW--GGXGXRGXG 178
G P P + G G G G
Sbjct: 306 GGPGMPGSFAPGAPGPGGPG 325
>Z70756-6|CAA94792.1| 290|Caenorhabditis elegans Hypothetical
protein T06E4.6 protein.
Length = 290
Score = 28.3 bits (60), Expect = 8.9
Identities = 20/49 (40%), Positives = 22/49 (44%), Gaps = 2/49 (4%)
Frame = -1
Query: 453 GGQRXXXXGXARXTPPPGXGXPXXTXPXGG--QPXKXGGXGRXXGRGGP 313
GGQR +R TP P G P P GG QP + GG G G P
Sbjct: 193 GGQR------SRGTPGPA-GAPGPQGPAGGPGQPGQSGGAGAPGPAGAP 234
>Z70756-4|CAA94788.1| 290|Caenorhabditis elegans Hypothetical
protein T06E4.4 protein.
Length = 290
Score = 28.3 bits (60), Expect = 8.9
Identities = 20/49 (40%), Positives = 22/49 (44%), Gaps = 2/49 (4%)
Frame = -1
Query: 453 GGQRXXXXGXARXTPPPGXGXPXXTXPXGG--QPXKXGGXGRXXGRGGP 313
GGQR +R TP P G P P GG QP + GG G G P
Sbjct: 193 GGQR------SRGTPGPS-GAPGPQGPAGGPGQPGQSGGAGAPGPAGAP 234
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.3 bits (60), Expect = 8.9
Identities = 18/57 (31%), Positives = 18/57 (31%)
Frame = -2
Query: 338 GGXXGGXXXDGXXKXAXGXXAPRXXGGAXXREXRXXGGPXAPXSGGXGGXGGXXXXG 168
GG GG G AP GG GG SGG G GG G
Sbjct: 164 GGGGGGGCGGGSSGGGGYAVAPSGGGGCGGGGSSGGGGYAVAPSGGGGCGGGGSSGG 220
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.3 bits (60), Expect = 8.9
Identities = 18/57 (31%), Positives = 18/57 (31%)
Frame = -2
Query: 338 GGXXGGXXXDGXXKXAXGXXAPRXXGGAXXREXRXXGGPXAPXSGGXGGXGGXXXXG 168
GG GG G AP GG GG SGG G GG G
Sbjct: 164 GGGGGGGCGGGSSGGGGYAVAPSGGGGCGGGGSSGGGGYAVAPSGGGGCGGGGSSGG 220
>U80444-7|AAO12447.1| 380|Caenorhabditis elegans Hypothetical
protein F26B1.2c protein.
Length = 380
Score = 28.3 bits (60), Expect = 8.9
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = -3
Query: 568 RXPPPEXGXXGPPPXNGXPPRXGGGXXGGGXKR 470
R P P+ G GPP G P GG GG +R
Sbjct: 218 RGPAPQRGGQGPP---GGPRSYGGAITQGGGQR 247
>U80444-5|AAB37791.1| 397|Caenorhabditis elegans Hypothetical
protein F26B1.2a protein.
Length = 397
Score = 28.3 bits (60), Expect = 8.9
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = -3
Query: 568 RXPPPEXGXXGPPPXNGXPPRXGGGXXGGGXKR 470
R P P+ G GPP G P GG GG +R
Sbjct: 235 RGPAPQRGGQGPP---GGPRSYGGAITQGGGQR 264
>U55373-4|ABR92605.1| 210|Caenorhabditis elegans Collagen protein
140, isoform b protein.
Length = 210
Score = 28.3 bits (60), Expect = 8.9
Identities = 15/32 (46%), Positives = 15/32 (46%), Gaps = 2/32 (6%)
Frame = -3
Query: 568 RXPPPEXGXXGPPPXNG--XPPRXGGGXXGGG 479
R PP E G GP NG PP GG G G
Sbjct: 153 RGPPGEVGPAGPSGDNGRKGPPGPPGGPGGPG 184
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 28.3 bits (60), Expect = 8.9
Identities = 20/63 (31%), Positives = 21/63 (33%)
Frame = +1
Query: 184 PPXPPXPPXXGAXGPPXXRXSRXXAPPXXRGAXXPXAXFXXPSXXXPPXXPPPTXSLXRL 363
PP PP PP A PP PP F P PP PPP +
Sbjct: 28 PPCPPPPPPMCAP-PPLPCPPPPICPPQ----------FCPPPPMCPPPPPPPPPPMCPP 76
Query: 364 PAP 372
P P
Sbjct: 77 PPP 79
>U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical
protein R144.4a protein.
Length = 360
Score = 28.3 bits (60), Expect = 8.9
Identities = 11/27 (40%), Positives = 12/27 (44%)
Frame = +1
Query: 169 PXXXXPPXPPXPPXXGAXGPPXXRXSR 249
P PP PP PP A PP +R
Sbjct: 3 PPPPPPPPPPPPPPPAASAPPPSSNAR 29
>U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical
protein R144.4b protein.
Length = 362
Score = 28.3 bits (60), Expect = 8.9
Identities = 11/27 (40%), Positives = 12/27 (44%)
Frame = +1
Query: 169 PXXXXPPXPPXPPXXGAXGPPXXRXSR 249
P PP PP PP A PP +R
Sbjct: 3 PPPPPPPPPPPPPPPAASAPPPSSNAR 29
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 28.3 bits (60), Expect = 8.9
Identities = 15/49 (30%), Positives = 16/49 (32%)
Frame = +2
Query: 575 PPGXGXXPGPSPXAXAXLXXPXXXXGAAPLFRXFPXXPPPPLXGXPXPA 721
PP P PSP P P+ PPPP P PA
Sbjct: 476 PPSRIPNPSPSPQPAEVSKSPPPPPPLPPIATPSSVPPPPPPPPPPPPA 524
>AL132864-1|CAB63392.1| 613|Caenorhabditis elegans Hypothetical
protein Y53H1A.1 protein.
Length = 613
Score = 28.3 bits (60), Expect = 8.9
Identities = 20/60 (33%), Positives = 21/60 (35%), Gaps = 1/60 (1%)
Frame = +2
Query: 554 RGXSPXGPPGXGXXPGPSPXAXAXLXXPXXXXGAAPLFRXFPXXPPPP-LXGXPXPARGP 730
RG P P G G P A P P + FP PP P G P P R P
Sbjct: 97 RGYPPPPPQGADTWRGAPPPAHHGHFGPPGHHFQGPP-QHFPPGPPRPHFPGPPGPHRPP 155
>AF067607-9|AAF98609.1| 460|Caenorhabditis elegans Collagen protein
102 protein.
Length = 460
Score = 28.3 bits (60), Expect = 8.9
Identities = 19/57 (33%), Positives = 22/57 (38%), Gaps = 1/57 (1%)
Frame = -1
Query: 729 GPRAGXGXPXRGGGGXXGKXRKRGAAPXXXXGXXRXAXAXGE-GPGXXPXPGGPXGD 562
GP G P G G GK G+ + A GE GP P P GP G+
Sbjct: 171 GPAGEAGPP--GPPGPDGKPGAAGSDGEAGAPGTKTTNAPGEPGPAGPPGPPGPNGE 225
>AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen
protein 142 protein.
Length = 325
Score = 28.3 bits (60), Expect = 8.9
Identities = 30/126 (23%), Positives = 35/126 (27%), Gaps = 6/126 (4%)
Frame = -1
Query: 921 PXPGGXPRXPXXXXGGGXXXGPANRGXXGXTXGXXPXXXXXXXXXXXXXXXXXXXXGAAA 742
P P G P P G PA G G P
Sbjct: 139 PGPAGPPGAPGPKGNNGQPGAPAQSGGRGPPGPRGPAGDAGSPGQPGHPGSPGNPGRGGQ 198
Query: 741 XXQ--XGPRAGXGXPXRGGG-GXXGKXRKRGA-APXXXXG-XXRXAXAXGEG-PGXXPXP 580
+ GP G P GG G G G+ P G + + +G PG P
Sbjct: 199 RSRGLPGPSGRPGPPGPAGGPGQPGHSGGAGSPGPQGPPGPSGQPGHSGNDGVPGAPGNP 258
Query: 579 GGPXGD 562
G P GD
Sbjct: 259 GSPGGD 264
Score = 28.3 bits (60), Expect = 8.9
Identities = 28/91 (30%), Positives = 30/91 (32%), Gaps = 11/91 (12%)
Frame = +2
Query: 170 PXXPXPRX----PXPPQXXGX*GXP----PXGXPGGXLRXS-PGXRXGXXRXFXXHXGPP 322
P P P+ P P G G P P G G + PG R G P
Sbjct: 145 PGAPGPKGNNGQPGAPAQSGGRGPPGPRGPAGDAGSPGQPGHPGSPGNPGRGGQRSRGLP 204
Query: 323 RPXXRPXPPXFXGCP--PXGXVXXGXPXPGG 409
P RP PP G P P G P P G
Sbjct: 205 GPSGRPGPPGPAGGPGQPGHSGGAGSPGPQG 235
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 28.3 bits (60), Expect = 8.9
Identities = 18/63 (28%), Positives = 18/63 (28%)
Frame = -2
Query: 371 GAGNRXXEXVGGGXXGGXXXDGXXKXAXGXXAPRXXGGAXXREXRXXGGPXAPXSGGXGG 192
G G GGG GG G G GG GG GG G
Sbjct: 166 GGGGMGGGGYGGGGDGGYGGGGFGGGGMGGYGGGMGGGGYGGGGMGGGGYGGGGDGGYGP 225
Query: 191 XGG 183
GG
Sbjct: 226 SGG 228
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.312 0.146 0.508
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,095,069
Number of Sequences: 27780
Number of extensions: 347002
Number of successful extensions: 2984
Number of sequences better than 10.0: 90
Number of HSP's better than 10.0 without gapping: 685
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2419
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2573710548
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
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