Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP10_F_C02
(866 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_02_0711 - 13180406-13180423,13180483-13180563,13181026-131811... 85 9e-17
08_01_0921 + 9075409-9075511,9075606-9075689,9075744-9075806,907... 75 7e-14
07_01_0844 + 6855195-6855342,6855752-6855802,6856460-6856530,685... 64 1e-10
07_01_0842 + 6840943-6841288,6841800-6841970,6842762-6842832,684... 64 1e-10
03_06_0420 + 33794045-33794192,33794831-33794901,33795093-337952... 64 1e-10
01_01_1138 - 9019049-9019159,9019525-9019606,9020059-9020177,902... 64 1e-10
11_06_0218 + 21361975-21362314,21362463-21362545,21363870-213639... 63 3e-10
05_05_0295 - 23912502-23912507,23912631-23912712,23913020-239131... 63 3e-10
02_05_0413 + 28773869-28773925,28774045-28774135,28774515-287746... 56 5e-08
01_06_1108 + 34574299-34574446,34575000-34575070,34575246-345753... 55 6e-08
10_08_1062 + 22626262-22626318,22626404-22626494,22626601-226267... 53 3e-07
06_01_0098 + 818374-818427,818537-818627,818753-818868,818962-81... 52 6e-07
02_01_0226 + 1476529-1476585,1477207-1477297,1478247-1478362,147... 50 2e-06
12_02_0764 - 22973675-22973995,22975626-22975757,22977074-22977202 41 0.001
01_03_0154 + 13269335-13269463,13269597-13269728,13270704-13271024 41 0.001
01_01_1068 - 8413269-8413589,8414011-8414262,8417472-8417603,841... 41 0.001
06_01_0853 + 6486027-6486158,6486561-6486692,6486974-6486978,648... 39 0.005
03_03_0224 + 15580944-15581036,15581630-15581770,15582385-155824... 38 0.010
03_02_0046 - 5255513-5255630,5255715-5255876,5256579-5256733,525... 36 0.042
07_03_1298 - 25592788-25592890,25593126-25593229,25593747-255938... 35 0.073
02_04_0402 + 22618998-22619043,22619206-22619345,22620067-226201... 32 0.68
02_03_0235 - 16702768-16702956,16703956-16704492,16705084-167052... 31 0.90
12_01_0707 - 6133561-6133947 31 1.2
04_04_0191 + 23468410-23468455,23468560-23468699,23469119-234692... 30 2.1
02_05_0639 - 30552148-30552265,30552362-30552523,30553177-305532... 30 2.8
10_03_0038 - 7297210-7297248,7297361-7297429,7297524-7297731,729... 28 8.4
>02_02_0711 -
13180406-13180423,13180483-13180563,13181026-13181188,
13182096-13182206,13182365-13182429
Length = 145
Score = 84.6 bits (200), Expect = 9e-17
Identities = 37/56 (66%), Positives = 49/56 (87%)
Frame = +1
Query: 157 MGFLTILKKLRQKEKEMRILMLGLDNAGKTTILKRFNGEPIDTISPTLGFNIKTLE 324
MG L+I++K+++KEKEMRILM+GLDN+GKTTI+ + NGE ISPTLGFNIKT++
Sbjct: 1 MGLLSIIRKIKRKEKEMRILMVGLDNSGKTTIVLKINGEDTGVISPTLGFNIKTIK 56
Score = 58.8 bits (136), Expect = 5e-09
Identities = 29/83 (34%), Positives = 37/83 (44%)
Frame = +2
Query: 323 KHKGFKLNIWDVGGQKSLRSYWKNYFESTXXXXXXXXXXXXXRLSACXXXXXXXXXXXXX 502
K+ + LNIWD+GGQK++RSYW+NYFE T RL C
Sbjct: 56 KYHKYSLNIWDIGGQKTIRSYWRNYFEQTDGLVWVVDSSDIRRLDDCRAELHNLLKEERL 115
Query: 503 XXXXXXXXXNKCDLPGALSLXQI 571
NK D+ GAL +I
Sbjct: 116 AGASLLVFANKQDIQGALKPSEI 138
>08_01_0921 +
9075409-9075511,9075606-9075689,9075744-9075806,
9077163-9077181,9078227-9078338,9078902-9078949,
9079372-9079502,9079673-9079757,9079776-9079784
Length = 217
Score = 74.9 bits (176), Expect = 7e-14
Identities = 42/141 (29%), Positives = 58/141 (41%)
Frame = +2
Query: 323 KHKGFKLNIWDVGGQKSLRSYWKNYFESTXXXXXXXXXXXXXRLSACXXXXXXXXXXXXX 502
++ K +WD+GGQ S+R YW+ YF +T RL
Sbjct: 72 QYNNIKFQVWDLGGQTSIRPYWRCYFPNTQAIIYVVDSSDTDRLVTAKEEFHAILEEDEL 131
Query: 503 XXXXXXXXXNKCDLPGALSLXQIREALDLDSIKSHHWRIVRCSAVTGENLLEXNRLDVRR 682
NK DLPGAL I E+L+L IKS W I + SA+ GE L E V +
Sbjct: 132 KGAVVLVYANKQDLPGALDDAAITESLELHKIKSRQWAIFKTSAIKGEGLFEGLDCSVLQ 191
Query: 683 YCVENXTPXLXLXYFLXXALY 745
+ + P + +L Y
Sbjct: 192 HIILQFLPDECIWEYLMELTY 212
Score = 41.1 bits (92), Expect = 0.001
Identities = 21/31 (67%), Positives = 24/31 (77%), Gaps = 1/31 (3%)
Frame = +1
Query: 199 KEMRILMLGLDNAGKTTILKRFN-GEPIDTI 288
+E RIL+LGLDNAGKTTIL R GE + TI
Sbjct: 16 REARILVLGLDNAGKTTILYRLQMGEVVSTI 46
>07_01_0844 +
6855195-6855342,6855752-6855802,6856460-6856530,
6856736-6856855,6857043-6857161,6857377-6857458,
6857592-6857597
Length = 198
Score = 64.5 bits (150), Expect = 1e-10
Identities = 32/112 (28%), Positives = 47/112 (41%)
Frame = +2
Query: 323 KHKGFKLNIWDVGGQKSLRSYWKNYFESTXXXXXXXXXXXXXRLSACXXXXXXXXXXXXX 502
++K +WDVGGQ +R W++YF++T R+
Sbjct: 74 EYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDEL 133
Query: 503 XXXXXXXXXNKCDLPGALSLXQIREALDLDSIKSHHWRIVRCSAVTGENLLE 658
NK DLP A++ +I + L L S++ HW I A TGE L E
Sbjct: 134 RDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATTGEGLYE 185
Score = 42.7 bits (96), Expect = 4e-04
Identities = 26/54 (48%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Frame = +1
Query: 196 EKEMRILMLGLDNAGKTTILKRFN-GEPIDTISPTLGFNIKTLET*RI*VEHLG 354
+KEMRILM+GLD AGKTTIL + GE + TI PT+ + L + E G
Sbjct: 15 KKEMRILMVGLDAAGKTTILYKLKLGEIVTTI-PTIDIYLYVLSNLKAITEEKG 67
>07_01_0842 +
6840943-6841288,6841800-6841970,6842762-6842832,
6843068-6843187,6843654-6843772,6844045-6844126,
6844254-6844259
Length = 304
Score = 64.5 bits (150), Expect = 1e-10
Identities = 32/112 (28%), Positives = 47/112 (41%)
Frame = +2
Query: 323 KHKGFKLNIWDVGGQKSLRSYWKNYFESTXXXXXXXXXXXXXRLSACXXXXXXXXXXXXX 502
++K +WDVGGQ +R W++YF++T R+
Sbjct: 180 EYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDEL 239
Query: 503 XXXXXXXXXNKCDLPGALSLXQIREALDLDSIKSHHWRIVRCSAVTGENLLE 658
NK DLP A++ +I + L L S++ HW I A TGE L E
Sbjct: 240 RDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATTGEGLYE 291
Score = 54.8 bits (126), Expect = 8e-08
Identities = 28/44 (63%), Positives = 36/44 (81%), Gaps = 1/44 (2%)
Frame = +1
Query: 196 EKEMRILMLGLDNAGKTTILKRFN-GEPIDTISPTLGFNIKTLE 324
+KEMRILM+GLD AGKTTIL + GE + TI PT+GFN++T+E
Sbjct: 138 KKEMRILMVGLDAAGKTTILYKLKLGEIVTTI-PTIGFNVETVE 180
>03_06_0420 +
33794045-33794192,33794831-33794901,33795093-33795212,
33795466-33795584,33795775-33795856,33795984-33795989
Length = 181
Score = 64.5 bits (150), Expect = 1e-10
Identities = 32/112 (28%), Positives = 47/112 (41%)
Frame = +2
Query: 323 KHKGFKLNIWDVGGQKSLRSYWKNYFESTXXXXXXXXXXXXXRLSACXXXXXXXXXXXXX 502
++K +WDVGGQ +R W++YF++T R+
Sbjct: 57 EYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDEL 116
Query: 503 XXXXXXXXXNKCDLPGALSLXQIREALDLDSIKSHHWRIVRCSAVTGENLLE 658
NK DLP A++ +I + L L S++ HW I A TGE L E
Sbjct: 117 RDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATTGEGLYE 168
Score = 55.2 bits (127), Expect = 6e-08
Identities = 31/55 (56%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Frame = +1
Query: 163 FLTILKKLRQKEKEMRILMLGLDNAGKTTILKRFN-GEPIDTISPTLGFNIKTLE 324
F + +L K KEMRILM+GLD AGKTTIL + GE + TI PT+GFN++T+E
Sbjct: 5 FTKLFSRLFAK-KEMRILMVGLDAAGKTTILYKLKLGEIVTTI-PTIGFNVETVE 57
>01_01_1138 -
9019049-9019159,9019525-9019606,9020059-9020177,
9020977-9021096,9021313-9021383,9021801-9021948
Length = 216
Score = 64.5 bits (150), Expect = 1e-10
Identities = 32/112 (28%), Positives = 47/112 (41%)
Frame = +2
Query: 323 KHKGFKLNIWDVGGQKSLRSYWKNYFESTXXXXXXXXXXXXXRLSACXXXXXXXXXXXXX 502
++K +WDVGGQ +R W++YF++T R+
Sbjct: 57 EYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDEL 116
Query: 503 XXXXXXXXXNKCDLPGALSLXQIREALDLDSIKSHHWRIVRCSAVTGENLLE 658
NK DLP A++ +I + L L S++ HW I A TGE L E
Sbjct: 117 RDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATTGEGLYE 168
Score = 55.6 bits (128), Expect = 5e-08
Identities = 31/55 (56%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Frame = +1
Query: 163 FLTILKKLRQKEKEMRILMLGLDNAGKTTILKRFN-GEPIDTISPTLGFNIKTLE 324
F + +L K KEMRILM+GLD AGKTTIL + GE + TI PT+GFN++T+E
Sbjct: 5 FTKLFSRLFSK-KEMRILMVGLDAAGKTTILYKLKLGEIVTTI-PTIGFNVETVE 57
>11_06_0218 +
21361975-21362314,21362463-21362545,21363870-21363965,
21364451-21364813
Length = 293
Score = 62.9 bits (146), Expect = 3e-10
Identities = 33/104 (31%), Positives = 46/104 (44%)
Frame = +2
Query: 347 IWDVGGQKSLRSYWKNYFESTXXXXXXXXXXXXXRLSACXXXXXXXXXXXXXXXXXXXXX 526
+WD+GGQ+SLR+ W Y+ T R++
Sbjct: 174 VWDLGGQESLRTSWATYYRGTHAVIVVIDSTDRARINIIKDELFRLLQHGDLEGAVVLVF 233
Query: 527 XNKCDLPGALSLXQIREALDLDSIKSHHWRIVRCSAVTGENLLE 658
NK DL A+S +I +AL L SIK+H W I A+TGE L +
Sbjct: 234 ANKQDLKDAMSPAEITDALSLHSIKNHDWHIQASCAITGEGLYD 277
Score = 41.5 bits (93), Expect = 8e-04
Identities = 20/40 (50%), Positives = 31/40 (77%), Gaps = 1/40 (2%)
Frame = +1
Query: 199 KEMRILMLGLDNAGKTTILKRFN-GEPIDTISPTLGFNIK 315
KE +I+++GLDNAGKTT L + + GE + T +PT+G N++
Sbjct: 16 KEYKIVVVGLDNAGKTTTLYKLHLGEAV-TAAPTIGSNVE 54
>05_05_0295 -
23912502-23912507,23912631-23912712,23913020-23913138,
23913480-23913599,23913927-23913997,23914525-23914672
Length = 181
Score = 62.9 bits (146), Expect = 3e-10
Identities = 31/112 (27%), Positives = 47/112 (41%)
Frame = +2
Query: 323 KHKGFKLNIWDVGGQKSLRSYWKNYFESTXXXXXXXXXXXXXRLSACXXXXXXXXXXXXX 502
++K +WDVGGQ +R W++YF++T R+
Sbjct: 57 EYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVVEARDELHRMLNEDEL 116
Query: 503 XXXXXXXXXNKCDLPGALSLXQIREALDLDSIKSHHWRIVRCSAVTGENLLE 658
NK DLP A++ +I + L L S++ HW I A +GE L E
Sbjct: 117 RDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYE 168
Score = 55.2 bits (127), Expect = 6e-08
Identities = 31/55 (56%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Frame = +1
Query: 163 FLTILKKLRQKEKEMRILMLGLDNAGKTTILKRFN-GEPIDTISPTLGFNIKTLE 324
F + +L K KEMRILM+GLD AGKTTIL + GE + TI PT+GFN++T+E
Sbjct: 5 FTKLFSRLFAK-KEMRILMVGLDAAGKTTILYKLKLGEIVTTI-PTIGFNVETVE 57
>02_05_0413 +
28773869-28773925,28774045-28774135,28774515-28774630,
28775627-28775686,28775767-28775832,28776499-28776693
Length = 194
Score = 55.6 bits (128), Expect = 5e-08
Identities = 29/112 (25%), Positives = 46/112 (41%)
Frame = +2
Query: 323 KHKGFKLNIWDVGGQKSLRSYWKNYFESTXXXXXXXXXXXXXRLSACXXXXXXXXXXXXX 502
++K +WDVGGQ+ LR W++YF +T R+
Sbjct: 57 QYKNVMFTVWDVGGQEKLRPLWRHYFNNTDGLIYVVDSLDRERIGKAKAEFQAIVNDPLM 116
Query: 503 XXXXXXXXXNKCDLPGALSLXQIREALDLDSIKSHHWRIVRCSAVTGENLLE 658
NK D+ GA++ ++ E L L +K+ W I A+ G+ L E
Sbjct: 117 LNSVILVFANKQDMKGAMTPLEVCEGLGLYDLKNRIWHIQGSCALKGDGLYE 168
Score = 48.8 bits (111), Expect = 6e-06
Identities = 23/42 (54%), Positives = 34/42 (80%), Gaps = 1/42 (2%)
Frame = +1
Query: 202 EMRILMLGLDNAGKTTILKRFN-GEPIDTISPTLGFNIKTLE 324
EMR++MLGLD AGKTTIL + + GE + T+ PT+GFN++ ++
Sbjct: 17 EMRVVMLGLDAAGKTTILYKLHIGEVLSTV-PTIGFNVEKVQ 57
>01_06_1108 +
34574299-34574446,34575000-34575070,34575246-34575365,
34575471-34575488,34575708-34575826,34576244-34576325,
34576537-34576542
Length = 187
Score = 55.2 bits (127), Expect = 6e-08
Identities = 31/55 (56%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Frame = +1
Query: 163 FLTILKKLRQKEKEMRILMLGLDNAGKTTILKRFN-GEPIDTISPTLGFNIKTLE 324
F + +L K KEMRILM+GLD AGKTTIL + GE + TI PT+GFN++T+E
Sbjct: 5 FTKLFSRLFAK-KEMRILMVGLDAAGKTTILYKLKLGEIVTTI-PTIGFNVETVE 57
Score = 54.4 bits (125), Expect = 1e-07
Identities = 31/118 (26%), Positives = 47/118 (39%), Gaps = 6/118 (5%)
Frame = +2
Query: 323 KHKGFKLNIWDVGGQKSLRSYWKNYFESTXXXXXXXXXXXXXRLSACXXXXXXXXXXXXX 502
++K +WDVGGQ +R W++YF++T R+
Sbjct: 57 EYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVVEARDELHRMLNELQN 116
Query: 503 XXXXXXXXX------NKCDLPGALSLXQIREALDLDSIKSHHWRIVRCSAVTGENLLE 658
NK DLP A++ +I + L L S++ HW I A +GE L E
Sbjct: 117 WKKDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYE 174
>10_08_1062 +
22626262-22626318,22626404-22626494,22626601-22626716,
22627035-22627094,22627204-22627269,22627726-22627914
Length = 192
Score = 52.8 bits (121), Expect = 3e-07
Identities = 28/112 (25%), Positives = 45/112 (40%)
Frame = +2
Query: 323 KHKGFKLNIWDVGGQKSLRSYWKNYFESTXXXXXXXXXXXXXRLSACXXXXXXXXXXXXX 502
++K +WDVGGQ+ LR W++YF +T R+
Sbjct: 57 QYKNVVFTVWDVGGQEKLRPLWRHYFNNTDALIYVVDSLDRERIGRARAEFQAIINDPFM 116
Query: 503 XXXXXXXXXNKCDLPGALSLXQIREALDLDSIKSHHWRIVRCSAVTGENLLE 658
NK D+ GA++ ++ E L L + + W I A+ G+ L E
Sbjct: 117 LNSVLLVFANKQDMRGAMTPMEVCEGLGLYDLNNRIWHIQGTCALKGDGLYE 168
Score = 50.8 bits (116), Expect = 1e-06
Identities = 24/43 (55%), Positives = 35/43 (81%), Gaps = 1/43 (2%)
Frame = +1
Query: 199 KEMRILMLGLDNAGKTTILKRFN-GEPIDTISPTLGFNIKTLE 324
KEMR++MLGLD AGKTTIL + + GE + T+ PT+GFN++ ++
Sbjct: 16 KEMRVVMLGLDAAGKTTILYKLHIGEVLSTV-PTIGFNVEKVQ 57
>06_01_0098 +
818374-818427,818537-818627,818753-818868,818962-819087,
819175-819357
Length = 189
Score = 52.0 bits (119), Expect = 6e-07
Identities = 26/43 (60%), Positives = 35/43 (81%), Gaps = 1/43 (2%)
Frame = +1
Query: 199 KEMRILMLGLDNAGKTTILKRFN-GEPIDTISPTLGFNIKTLE 324
KEM++LMLGLD AGKTTIL R + GE + +I PT+GFN++ +E
Sbjct: 15 KEMKVLMLGLDAAGKTTILYRLHIGEVLSSI-PTIGFNVEKVE 56
Score = 51.6 bits (118), Expect = 8e-07
Identities = 28/111 (25%), Positives = 43/111 (38%), Gaps = 1/111 (0%)
Frame = +2
Query: 323 KHKGFKLNIWDVGGQKSLRSYWKNYFESTXXXXXXXXXXXXXRLSACXXXXXXXXXXXXX 502
++K +WDVGGQ LR W+ YF + R+
Sbjct: 56 EYKNVAFTVWDVGGQDKLRPLWRQYFRNADALIYVVDSMDRERIGVAKEEFQAIIRDPLM 115
Query: 503 XXXXXXXXXNKCDLPGALSLXQIREALD-LDSIKSHHWRIVRCSAVTGENL 652
NK DL GA+S ++ + L + +K+ W SA+TG+ L
Sbjct: 116 LNSVILLLANKQDLKGAMSSSEVCQRLGAYEELKNRRWHCQGASALTGDGL 166
>02_01_0226 +
1476529-1476585,1477207-1477297,1478247-1478362,
1478834-1478893,1479000-1479065,1479847-1480047
Length = 196
Score = 50.4 bits (115), Expect = 2e-06
Identities = 24/43 (55%), Positives = 35/43 (81%), Gaps = 1/43 (2%)
Frame = +1
Query: 199 KEMRILMLGLDNAGKTTILKRFN-GEPIDTISPTLGFNIKTLE 324
+EMR++MLGLD AGKTTIL R + GE + T+ PT+GFN++ ++
Sbjct: 16 REMRVVMLGLDAAGKTTILYRLHMGEVLSTV-PTVGFNVEKVQ 57
Score = 35.1 bits (77), Expect = 0.073
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +2
Query: 323 KHKGFKLNIWDVGGQKSLRSYWKNYFEST 409
++K +WDVGGQ+ LR WK Y ++
Sbjct: 57 QYKNVVFTVWDVGGQEKLRPLWKMYLSNS 85
>12_02_0764 - 22973675-22973995,22975626-22975757,22977074-22977202
Length = 193
Score = 40.7 bits (91), Expect = 0.001
Identities = 21/45 (46%), Positives = 26/45 (57%)
Frame = +1
Query: 163 FLTILKKLRQKEKEMRILMLGLDNAGKTTILKRFNGEPIDTISPT 297
F +L L +KE +IL LGLDNAGKTT+L E + PT
Sbjct: 7 FYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPT 51
Score = 29.1 bits (62), Expect = 4.8
Identities = 19/94 (20%), Positives = 31/94 (32%)
Frame = +2
Query: 338 KLNIWDVGGQKSLRSYWKNYFESTXXXXXXXXXXXXXRLSACXXXXXXXXXXXXXXXXXX 517
K +D+GG + R WK+Y+ R S
Sbjct: 65 KFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFSESKKELDALLSDDSLATVPF 124
Query: 518 XXXXNKCDLPGALSLXQIREALDLDSIKSHHWRI 619
NK D+P A S ++R + L + + R+
Sbjct: 125 LILGNKIDIPYAASEEELRYHMGLSNFTTGKGRV 158
>01_03_0154 + 13269335-13269463,13269597-13269728,13270704-13271024
Length = 193
Score = 40.7 bits (91), Expect = 0.001
Identities = 21/45 (46%), Positives = 26/45 (57%)
Frame = +1
Query: 163 FLTILKKLRQKEKEMRILMLGLDNAGKTTILKRFNGEPIDTISPT 297
F +L L +KE +IL LGLDNAGKTT+L E + PT
Sbjct: 7 FYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPT 51
>01_01_1068 -
8413269-8413589,8414011-8414262,8417472-8417603,
8417684-8417812
Length = 277
Score = 40.7 bits (91), Expect = 0.001
Identities = 21/45 (46%), Positives = 26/45 (57%)
Frame = +1
Query: 163 FLTILKKLRQKEKEMRILMLGLDNAGKTTILKRFNGEPIDTISPT 297
F +L L +KE +IL LGLDNAGKTT+L E + PT
Sbjct: 7 FYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPT 51
>06_01_0853 +
6486027-6486158,6486561-6486692,6486974-6486978,
6487948-6488017,6489456-6489776
Length = 219
Score = 39.1 bits (87), Expect = 0.005
Identities = 19/45 (42%), Positives = 26/45 (57%)
Frame = +1
Query: 163 FLTILKKLRQKEKEMRILMLGLDNAGKTTILKRFNGEPIDTISPT 297
F +L + +KE +IL LGLDNAGKTT+ + E + PT
Sbjct: 8 FYDVLASIGLWQKEAKILFLGLDNAGKTTLFYMLSQENLAVHQPT 52
>03_03_0224 +
15580944-15581036,15581630-15581770,15582385-15582493,
15582598-15582659,15583704-15583807,15584058-15584160
Length = 203
Score = 37.9 bits (84), Expect = 0.010
Identities = 22/105 (20%), Positives = 35/105 (33%)
Frame = +2
Query: 338 KLNIWDVGGQKSLRSYWKNYFESTXXXXXXXXXXXXXRLSACXXXXXXXXXXXXXXXXXX 517
KL WD+GGQ LR+ W+ Y++
Sbjct: 69 KLVFWDLGGQVGLRTIWEKYYQEAHAIIYVIDAAAASSFEDAKSALEKVLRHEDLKGAPL 128
Query: 518 XXXXNKCDLPGALSLXQIREALDLDSIKSHHWRIVRCSAVTGENL 652
NK DLPG ++ ++ L L + ++ SA G +
Sbjct: 129 LIFANKQDLPGVITDEELARYLQLKELDERPYKFQAVSAYDGRGI 173
Score = 37.5 bits (83), Expect = 0.014
Identities = 21/48 (43%), Positives = 30/48 (62%), Gaps = 7/48 (14%)
Frame = +1
Query: 202 EMRILMLGLDNAGKTTILKR-----FNGEPI--DTISPTLGFNIKTLE 324
E +L+LG+D AGKTT+L++ GE + D I PT+G NI +E
Sbjct: 17 EFHVLILGVDKAGKTTLLEKIKSIYLKGEGLTPDRIVPTVGLNIGRIE 64
>03_02_0046 -
5255513-5255630,5255715-5255876,5256579-5256733,
5256811-5256892,5257790-5257827
Length = 184
Score = 35.9 bits (79), Expect = 0.042
Identities = 20/52 (38%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Frame = +1
Query: 163 FLTILKKLRQKEKEMRILMLGLDNAGKTTILKRF-NGEPIDTISPTLGFNIK 315
FL L+ L K+ EM + ++GL NAGKT+++ G + + PT+GFN++
Sbjct: 7 FLNWLRSLFFKQ-EMELSLIGLQNAGKTSLVNVIATGGFSEDMIPTVGFNMR 57
Score = 29.9 bits (64), Expect = 2.8
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +2
Query: 341 LNIWDVGGQKSLRSYWKNY 397
+ +WD+GGQ RS W+ Y
Sbjct: 66 IKLWDLGGQPRFRSMWERY 84
>07_03_1298 -
25592788-25592890,25593126-25593229,25593747-25593808,
25593957-25594065,25594215-25594355,25594707-25594769,
25594974-25595084,25596140-25596457
Length = 336
Score = 35.1 bits (77), Expect = 0.073
Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 7/48 (14%)
Frame = +1
Query: 202 EMRILMLGLDNAGKTTILKRF-------NGEPIDTISPTLGFNIKTLE 324
E +++LG+ AGKTT+L++ G P D I PT+G NI +E
Sbjct: 150 EFHVVILGVHKAGKTTLLEKVKSIYLKEEGLPHDRIVPTVGLNIGRIE 197
Score = 34.7 bits (76), Expect = 0.097
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +2
Query: 338 KLNIWDVGGQKSLRSYWKNYFE 403
KL WD+GGQ LR+ W+ Y+E
Sbjct: 202 KLVFWDLGGQPGLRTIWEKYYE 223
>02_04_0402 +
22618998-22619043,22619206-22619345,22620067-22620149,
22620234-22620438,22620524-22620592,22621099-22621188
Length = 210
Score = 31.9 bits (69), Expect = 0.68
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +2
Query: 326 HKGFKLNIWDVGGQKSLRSYWKNYF 400
+K KL IWD GQ+S RS ++Y+
Sbjct: 52 NKPIKLQIWDTAGQESFRSITRSYY 76
>02_03_0235 -
16702768-16702956,16703956-16704492,16705084-16705233,
16705310-16705625,16707005-16707286,16707895-16707971,
16708121-16708186,16708700-16709246,16709435-16709565,
16709642-16709746,16709859-16710039,16710123-16710185,
16711000-16711109,16711576-16711638,16711859-16712191
Length = 1049
Score = 31.5 bits (68), Expect = 0.90
Identities = 15/37 (40%), Positives = 26/37 (70%)
Frame = +1
Query: 163 FLTILKKLRQKEKEMRILMLGLDNAGKTTILKRFNGE 273
F+TI K++ + + +R+L GL+ AGKT++LK G+
Sbjct: 738 FVTICKEVYVRTRRVRLL--GLEGAGKTSLLKALLGQ 772
>12_01_0707 - 6133561-6133947
Length = 128
Score = 31.1 bits (67), Expect = 1.2
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +3
Query: 420 RGWWTRLTGRDCRRARQNSARCSRRSVWRPPRCSC 524
R WW+R G C A AR + ++ WRP C C
Sbjct: 61 RPWWSRRCGGGC--AASWVARPAVQASWRPATCGC 93
>04_04_0191 +
23468410-23468455,23468560-23468699,23469119-23469201,
23469346-23469550,23469632-23469735,23470290-23470449
Length = 245
Score = 30.3 bits (65), Expect = 2.1
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +2
Query: 338 KLNIWDVGGQKSLRSYWKNYF 400
KL IWD GQ+S RS ++Y+
Sbjct: 56 KLQIWDTAGQESFRSITRSYY 76
>02_05_0639 -
30552148-30552265,30552362-30552523,30553177-30553298,
30553515-30553596,30554407-30554699
Length = 258
Score = 29.9 bits (64), Expect = 2.8
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = +2
Query: 341 LNIWDVGGQKSLRSYWKNY 397
+ +WD+GGQ+ R+ W+ Y
Sbjct: 140 IKLWDLGGQRRFRTMWERY 158
>10_03_0038 -
7297210-7297248,7297361-7297429,7297524-7297731,
7297829-7297911,7298859-7298998,7299132-7299183
Length = 196
Score = 28.3 bits (60), Expect = 8.4
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +2
Query: 329 KGFKLNIWDVGGQKSLRSYWKNYF 400
K KL IWD GQ++ R ++Y+
Sbjct: 55 KNTKLQIWDTAGQEAFRCITRSYY 78
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,592,674
Number of Sequences: 37544
Number of extensions: 258232
Number of successful extensions: 813
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 755
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 803
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2432722788
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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