Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_C01
         (1171 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0686 - 30900748-30902167,30903442-30904742                       32   1.0  
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943...    30   3.1  
09_02_0327 - 7284829-7284889,7284946-7286126                           29   7.1  
07_01_0080 + 587674-588510                                             29   7.1  
12_02_0876 - 23926691-23928090,23928184-23928919,23929048-23929272     29   9.4  
11_05_0089 + 18975637-18977439                                         29   9.4  
07_03_0859 + 22054087-22055421                                         29   9.4  

>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 31.9 bits (69), Expect = 1.0
 Identities = 13/30 (43%), Positives = 13/30 (43%)
 Frame = +2

Query: 767 GGPPXPXTXGXXXPPKXXGXXRXXPPPPXG 856
           G PP P   G   PP   G     PPPP G
Sbjct: 343 GPPPPPPAKGPPPPPPPKGPSPPPPPPPGG 372


>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
            9435445-9435526,9435610-9435660,9435749-9435829,
            9435965-9436006,9436117-9436215,9438130-9438201,
            9438557-9438680,9438850-9439723,9440274-9440456,
            9440941-9442741,9442825-9443049,9443117-9443814,
            9444519-9444591
          Length = 1541

 Score = 30.3 bits (65), Expect = 3.1
 Identities = 14/30 (46%), Positives = 14/30 (46%)
 Frame = +2

Query: 767  GGPPXPXTXGXXXPPKXXGXXRXXPPPPXG 856
            GGPP P   G   PP   G     PPPP G
Sbjct: 1196 GGPPTPP--GAPAPPMPPGVPGGPPPPPGG 1223



 Score = 28.7 bits (61), Expect = 9.4
 Identities = 14/34 (41%), Positives = 14/34 (41%), Gaps = 4/34 (11%)
 Frame = +2

Query: 767  GGPPXPXTX----GXXXPPKXXGXXRXXPPPPXG 856
            GGPP P       G   PP   G     PPPP G
Sbjct: 1158 GGPPAPPPPAGFRGGTPPPNAHGGVAPPPPPPRG 1191


>09_02_0327 - 7284829-7284889,7284946-7286126
          Length = 413

 Score = 29.1 bits (62), Expect = 7.1
 Identities = 10/14 (71%), Positives = 10/14 (71%)
 Frame = -3

Query: 605 GAXPPPXXXPPPPP 564
           GA PPP   PPPPP
Sbjct: 50  GAHPPPPPPPPPPP 63


>07_01_0080 + 587674-588510
          Length = 278

 Score = 29.1 bits (62), Expect = 7.1
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = -3

Query: 611 SXGAXPPPXXXPPPPP 564
           S G+ PPP   PPPPP
Sbjct: 100 SSGSPPPPPPPPPPPP 115


>12_02_0876 - 23926691-23928090,23928184-23928919,23929048-23929272
          Length = 786

 Score = 28.7 bits (61), Expect = 9.4
 Identities = 12/28 (42%), Positives = 13/28 (46%)
 Frame = -3

Query: 647 RRRXRXXSXXXFSXGAXPPPXXXPPPPP 564
           RRR R  +         PPP   PPPPP
Sbjct: 722 RRRARSVAIAVEEVEVSPPPAPAPPPPP 749


>11_05_0089 + 18975637-18977439
          Length = 600

 Score = 28.7 bits (61), Expect = 9.4
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = -3

Query: 614 FSXGAXPPPXXXPPPPP 564
           +S G  PPP   PPPPP
Sbjct: 78  YSPGWGPPPNPNPPPPP 94


>07_03_0859 + 22054087-22055421
          Length = 444

 Score = 28.7 bits (61), Expect = 9.4
 Identities = 14/32 (43%), Positives = 15/32 (46%)
 Frame = -3

Query: 656 RXRRRRXRXXSXXXFSXGAXPPPXXXPPPPPL 561
           R RRRR    +    S  A P P   P PPPL
Sbjct: 18  RRRRRRAAKPNAATPSPAARPAPTPTPTPPPL 49


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,464,872
Number of Sequences: 37544
Number of extensions: 403542
Number of successful extensions: 4910
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1616
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4163
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3573221976
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)