Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_B23
         (972 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    26   1.5  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            26   2.0  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    25   4.5  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    25   4.5  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    25   4.5  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    24   6.0  

>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 26.2 bits (55), Expect = 1.5
 Identities = 13/27 (48%), Positives = 14/27 (51%)
 Frame = -2

Query: 755 GGGSPPPXXXAXGFXGXPGXGGGGPXG 675
           GGG+P       G  G PG GGGG  G
Sbjct: 208 GGGAP---GGGGGSSGGPGPGGGGGGG 231



 Score = 24.2 bits (50), Expect = 6.0
 Identities = 11/25 (44%), Positives = 11/25 (44%)
 Frame = -2

Query: 704 PGXGGGGPXGXXPXQGRPXXXVXGP 630
           PG GGGG  G  P  G       GP
Sbjct: 200 PGAGGGGSGGGAPGGGGGSSGGPGP 224


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 25.8 bits (54), Expect = 2.0
 Identities = 12/24 (50%), Positives = 12/24 (50%), Gaps = 1/24 (4%)
 Frame = +1

Query: 676 PXGPPPPXP-GXPXXPXAXXXGGG 744
           P  PPPP P G P  P A    GG
Sbjct: 582 PPAPPPPPPMGPPPSPLAGGPLGG 605


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 24.6 bits (51), Expect = 4.5
 Identities = 15/39 (38%), Positives = 15/39 (38%), Gaps = 1/39 (2%)
 Frame = -2

Query: 788 GXXPXGXXKXPGGGSPPPXXXAXGFXG-XPGXGGGGPXG 675
           G    G     GGGS  P     G  G   G GGGG  G
Sbjct: 528 GSRTVGAGGMAGGGSDGPEYEGAGRGGVGSGIGGGGGGG 566



 Score = 24.6 bits (51), Expect = 4.5
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = -2

Query: 755 GGGSPPPXXXAXGFXGXPGXGGGGPXG 675
           GGG+  P   + G  G    GGGG  G
Sbjct: 841 GGGAGGPLRGSSGGAGGGSSGGGGSGG 867


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 24.6 bits (51), Expect = 4.5
 Identities = 26/91 (28%), Positives = 28/91 (30%), Gaps = 2/91 (2%)
 Frame = -1

Query: 696 GGRGPXGXXPXPGAPXXXGXXXXCXPLGNTXVFPRXXXXXXXGXTGXPXPWXXXXTXSPP 517
           G RG  G    PG P   G      P+G              G  G   P         P
Sbjct: 332 GERGHKGEKGLPGQPGPRGRDGNFGPVGLPGQKGDRGSEGLHGLKGQSGPKGEPGRDGIP 391

Query: 516 TRXGXGXXGP-GXXGTGRGXP-XXXPPSPRG 430
            + G    GP G  G G G P    P  PRG
Sbjct: 392 GQPGIA--GPAGAPGGGEGRPGAPGPKGPRG 420



 Score = 24.2 bits (50), Expect = 6.0
 Identities = 15/48 (31%), Positives = 15/48 (31%)
 Frame = -2

Query: 773 GXXKXPGGGSPPPXXXAXGFXGXPGXGGGGPXGXXPXQGRPXXXVXGP 630
           G    PG    P      G  G PG G G P    P   R      GP
Sbjct: 380 GPKGEPGRDGIPGQPGIAGPAGAPGGGEGRPGAPGPKGPRGYEGPQGP 427


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 24.6 bits (51), Expect = 4.5
 Identities = 14/39 (35%), Positives = 14/39 (35%)
 Frame = -1

Query: 756 RGGVPPPXXXGGXXXGXPGXGGRGPXGXXPXPGAPXXXG 640
           R G P P    G        G  GP G    PGAP   G
Sbjct: 714 RKGPPGPPGFNGPKGDKGLPGLAGPAGIPGAPGAPGEMG 752



 Score = 23.8 bits (49), Expect = 7.9
 Identities = 12/37 (32%), Positives = 13/37 (35%)
 Frame = -1

Query: 750 GVPPPXXXGGXXXGXPGXGGRGPXGXXPXPGAPXXXG 640
           G P P    G        G +GP G    PG P   G
Sbjct: 146 GTPGPPGYPGDVGPKGEPGPKGPAGHPGAPGRPGVDG 182



 Score = 23.8 bits (49), Expect = 7.9
 Identities = 12/34 (35%), Positives = 14/34 (41%), Gaps = 1/34 (2%)
 Frame = -1

Query: 711 GXPGX-GGRGPXGXXPXPGAPXXXGXXXXCXPLG 613
           G PG  G +G  G    PG P   G      P+G
Sbjct: 382 GFPGVKGDKGTTGLPGIPGPPCVDGLPGAAGPVG 415


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 24.2 bits (50), Expect = 6.0
 Identities = 19/64 (29%), Positives = 21/64 (32%)
 Frame = -2

Query: 773 GXXKXPGGGSPPPXXXAXGFXGXPGXGGGGPXGXXPXQGRPXXXVXGPXAXPWGTXGFSP 594
           G  + P  G PPP        G        P       G P   V GP   P    G +P
Sbjct: 253 GMQRPPMMGQPPPIRPPNPMGGPRPQIS--PQNSNLSGGMPSGMV-GPPRPPMPMQGGAP 309

Query: 593 GXPP 582
           G PP
Sbjct: 310 GGPP 313


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 522,218
Number of Sequences: 2352
Number of extensions: 9951
Number of successful extensions: 41
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38
length of database: 563,979
effective HSP length: 65
effective length of database: 411,099
effective search space used: 106063542
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)