Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP10_F_B22
(925 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 40 0.002
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 40 0.002
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 40 0.002
Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical pr... 37 0.018
AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical ... 36 0.031
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 36 0.054
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 36 0.054
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 36 0.054
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 36 0.054
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 36 0.054
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 34 0.12
Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical pr... 34 0.17
V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein ( Caeno... 33 0.22
J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein ( C.ele... 33 0.22
Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen... 33 0.38
Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen... 33 0.38
U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein ... 33 0.38
U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein ... 33 0.38
U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV) coll... 33 0.38
Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical pr... 32 0.50
Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical pr... 32 0.50
Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical pr... 32 0.67
U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protei... 31 1.5
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 31 1.5
AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen prot... 31 1.5
Z95559-1|CAB08999.1| 289|Caenorhabditis elegans Hypothetical pr... 30 2.0
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 30 2.7
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 30 2.7
AL031629-6|CAA20980.2| 948|Caenorhabditis elegans Hypothetical ... 30 2.7
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 29 3.6
Z83120-6|CAB76722.1| 809|Caenorhabditis elegans Hypothetical pr... 29 4.7
AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical... 29 4.7
AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like pro... 29 4.7
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 29 6.2
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 29 6.2
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 29 6.2
AL132864-1|CAB63392.1| 613|Caenorhabditis elegans Hypothetical ... 29 6.2
AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen prot... 29 6.2
Z95621-2|CAB09131.1| 330|Caenorhabditis elegans Hypothetical pr... 28 8.2
Z95559-8|CAB54437.1| 720|Caenorhabditis elegans Hypothetical pr... 28 8.2
Z78019-9|CAB01457.1| 330|Caenorhabditis elegans Hypothetical pr... 28 8.2
Z46791-4|CAA86758.1| 317|Caenorhabditis elegans Hypothetical pr... 28 8.2
U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protei... 28 8.2
U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astaci... 28 8.2
AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular col... 28 8.2
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 28 8.2
AF000198-7|AAB53052.1| 418|Caenorhabditis elegans Collagen prot... 28 8.2
AC006638-2|AAK85481.1| 1256|Caenorhabditis elegans Cyclase assoc... 28 8.2
AC006638-1|AAK85482.1| 495|Caenorhabditis elegans Cyclase assoc... 28 8.2
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 40.3 bits (90), Expect = 0.002
Identities = 31/116 (26%), Positives = 37/116 (31%)
Frame = +1
Query: 517 PPPXXKTXXPXXXXXGGGVXTPPNXXXGXXPXNPGKXXEKXPFXTLXPXKGPQTQKXPRG 696
PPP P G +PP G P P P P P P G
Sbjct: 255 PPPPPAAGSPPPPRTG----SPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTG 310
Query: 697 XXFFXXXFPPPPGPX*KKXPPXFWXGXPPEXXKKKKRXPPXXXPPGAPPLXFPXXG 864
PPP PP G PP ++K++ P P G+PP P G
Sbjct: 311 S------LPPPQAGG---SPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPPTG 357
Score = 35.5 bits (78), Expect = 0.054
Identities = 21/61 (34%), Positives = 21/61 (34%)
Frame = +1
Query: 673 QTQKXPRGXXFFXXXFPPPPGPX*KKXPPXFWXGXPPEXXKKKKRXPPXXXPPGAPPLXF 852
QTQ RG PPP P K PP G PP PP P PP
Sbjct: 220 QTQNGFRGKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGS 279
Query: 853 P 855
P
Sbjct: 280 P 280
Score = 31.5 bits (68), Expect = 0.88
Identities = 31/116 (26%), Positives = 37/116 (31%), Gaps = 3/116 (2%)
Frame = +1
Query: 517 PPPXXKTXXPXXXXXGGGVXTPPNXXXGXXPXNPGKXXEKXPFXTLXPXKGPQ--TQKXP 690
PPP K P G T PGK E+ P GP+ + P
Sbjct: 331 PPPRQKRQAPERSPPTGSPPTGSPPTGRPPRGGPGKSSEESSESREGPRGGPRGGPRGGP 390
Query: 691 R-GXXFFXXXFPPPPGPX*KKXPPXFWXGXPPEXXKKKKRXPPXXXPPGAPPLXFP 855
R P GP ++ PP G PP R P P G+PP P
Sbjct: 391 RKSSEESSESREEPRGP--RRSPP---TGSPPTGSPPTGRPPRGSPPTGSPPTGLP 441
Score = 30.3 bits (65), Expect = 2.0
Identities = 22/70 (31%), Positives = 27/70 (38%), Gaps = 1/70 (1%)
Frame = +1
Query: 658 PXKGPQTQKXPRGXXFFXXXFPPPPGPX*KKXPPXFWXGXPPEXX-KKKKRXPPXXXPPG 834
P + P T P G PP G + PP G PP ++KR P P G
Sbjct: 407 PRRSPPTGSPPTGS--------PPTGRPPRGSPPT---GSPPTGLPSRQKRQAPEDRPTG 455
Query: 835 APPLXFPXXG 864
+PP P G
Sbjct: 456 SPPTGSPPTG 465
Score = 29.9 bits (64), Expect = 2.7
Identities = 22/83 (26%), Positives = 24/83 (28%), Gaps = 4/83 (4%)
Frame = +1
Query: 658 PXKGPQTQKXPRGXXFFXXXFPPPPGPX*KKXPPXFWXGXPPEXXKKKKRXPPXXXPP-- 831
P P P+G PPP P PP PP P PP
Sbjct: 233 PAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP 292
Query: 832 --GAPPLXFPXXGGXXXXXXPFP 894
G+PP P G P P
Sbjct: 293 RAGSPPPPPPPRGSPPTGSLPPP 315
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 40.3 bits (90), Expect = 0.002
Identities = 31/116 (26%), Positives = 37/116 (31%)
Frame = +1
Query: 517 PPPXXKTXXPXXXXXGGGVXTPPNXXXGXXPXNPGKXXEKXPFXTLXPXKGPQTQKXPRG 696
PPP P G +PP G P P P P P P G
Sbjct: 276 PPPPPAAGSPPPPRTG----SPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTG 331
Query: 697 XXFFXXXFPPPPGPX*KKXPPXFWXGXPPEXXKKKKRXPPXXXPPGAPPLXFPXXG 864
PPP PP G PP ++K++ P P G+PP P G
Sbjct: 332 S------LPPPQAGG---SPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPPTG 378
Score = 35.5 bits (78), Expect = 0.054
Identities = 21/61 (34%), Positives = 21/61 (34%)
Frame = +1
Query: 673 QTQKXPRGXXFFXXXFPPPPGPX*KKXPPXFWXGXPPEXXKKKKRXPPXXXPPGAPPLXF 852
QTQ RG PPP P K PP G PP PP P PP
Sbjct: 241 QTQNGFRGKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGS 300
Query: 853 P 855
P
Sbjct: 301 P 301
Score = 31.5 bits (68), Expect = 0.88
Identities = 31/116 (26%), Positives = 37/116 (31%), Gaps = 3/116 (2%)
Frame = +1
Query: 517 PPPXXKTXXPXXXXXGGGVXTPPNXXXGXXPXNPGKXXEKXPFXTLXPXKGPQ--TQKXP 690
PPP K P G T PGK E+ P GP+ + P
Sbjct: 352 PPPRQKRQAPERSPPTGSPPTGSPPTGRPPRGGPGKSSEESSESREGPRGGPRGGPRGGP 411
Query: 691 R-GXXFFXXXFPPPPGPX*KKXPPXFWXGXPPEXXKKKKRXPPXXXPPGAPPLXFP 855
R P GP ++ PP G PP R P P G+PP P
Sbjct: 412 RKSSEESSESREEPRGP--RRSPP---TGSPPTGSPPTGRPPRGSPPTGSPPTGLP 462
Score = 30.3 bits (65), Expect = 2.0
Identities = 22/70 (31%), Positives = 27/70 (38%), Gaps = 1/70 (1%)
Frame = +1
Query: 658 PXKGPQTQKXPRGXXFFXXXFPPPPGPX*KKXPPXFWXGXPPEXX-KKKKRXPPXXXPPG 834
P + P T P G PP G + PP G PP ++KR P P G
Sbjct: 428 PRRSPPTGSPPTGS--------PPTGRPPRGSPPT---GSPPTGLPSRQKRQAPEDRPTG 476
Query: 835 APPLXFPXXG 864
+PP P G
Sbjct: 477 SPPTGSPPTG 486
Score = 29.9 bits (64), Expect = 2.7
Identities = 22/83 (26%), Positives = 24/83 (28%), Gaps = 4/83 (4%)
Frame = +1
Query: 658 PXKGPQTQKXPRGXXFFXXXFPPPPGPX*KKXPPXFWXGXPPEXXKKKKRXPPXXXPP-- 831
P P P+G PPP P PP PP P PP
Sbjct: 254 PAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP 313
Query: 832 --GAPPLXFPXXGGXXXXXXPFP 894
G+PP P G P P
Sbjct: 314 RAGSPPPPPPPRGSPPTGSLPPP 336
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 40.3 bits (90), Expect = 0.002
Identities = 31/116 (26%), Positives = 37/116 (31%)
Frame = +1
Query: 517 PPPXXKTXXPXXXXXGGGVXTPPNXXXGXXPXNPGKXXEKXPFXTLXPXKGPQTQKXPRG 696
PPP P G +PP G P P P P P P G
Sbjct: 261 PPPPPAAGSPPPPRTG----SPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTG 316
Query: 697 XXFFXXXFPPPPGPX*KKXPPXFWXGXPPEXXKKKKRXPPXXXPPGAPPLXFPXXG 864
PPP PP G PP ++K++ P P G+PP P G
Sbjct: 317 S------LPPPQAGG---SPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPPTG 363
Score = 35.5 bits (78), Expect = 0.054
Identities = 21/61 (34%), Positives = 21/61 (34%)
Frame = +1
Query: 673 QTQKXPRGXXFFXXXFPPPPGPX*KKXPPXFWXGXPPEXXKKKKRXPPXXXPPGAPPLXF 852
QTQ RG PPP P K PP G PP PP P PP
Sbjct: 226 QTQNGFRGKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGS 285
Query: 853 P 855
P
Sbjct: 286 P 286
Score = 31.5 bits (68), Expect = 0.88
Identities = 31/116 (26%), Positives = 37/116 (31%), Gaps = 3/116 (2%)
Frame = +1
Query: 517 PPPXXKTXXPXXXXXGGGVXTPPNXXXGXXPXNPGKXXEKXPFXTLXPXKGPQ--TQKXP 690
PPP K P G T PGK E+ P GP+ + P
Sbjct: 337 PPPRQKRQAPERSPPTGSPPTGSPPTGRPPRGGPGKSSEESSESREGPRGGPRGGPRGGP 396
Query: 691 R-GXXFFXXXFPPPPGPX*KKXPPXFWXGXPPEXXKKKKRXPPXXXPPGAPPLXFP 855
R P GP ++ PP G PP R P P G+PP P
Sbjct: 397 RKSSEESSESREEPRGP--RRSPP---TGSPPTGSPPTGRPPRGSPPTGSPPTGLP 447
Score = 30.3 bits (65), Expect = 2.0
Identities = 22/70 (31%), Positives = 27/70 (38%), Gaps = 1/70 (1%)
Frame = +1
Query: 658 PXKGPQTQKXPRGXXFFXXXFPPPPGPX*KKXPPXFWXGXPPEXX-KKKKRXPPXXXPPG 834
P + P T P G PP G + PP G PP ++KR P P G
Sbjct: 413 PRRSPPTGSPPTGS--------PPTGRPPRGSPPT---GSPPTGLPSRQKRQAPEDRPTG 461
Query: 835 APPLXFPXXG 864
+PP P G
Sbjct: 462 SPPTGSPPTG 471
Score = 29.9 bits (64), Expect = 2.7
Identities = 22/83 (26%), Positives = 24/83 (28%), Gaps = 4/83 (4%)
Frame = +1
Query: 658 PXKGPQTQKXPRGXXFFXXXFPPPPGPX*KKXPPXFWXGXPPEXXKKKKRXPPXXXPP-- 831
P P P+G PPP P PP PP P PP
Sbjct: 239 PAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP 298
Query: 832 --GAPPLXFPXXGGXXXXXXPFP 894
G+PP P G P P
Sbjct: 299 RAGSPPPPPPPRGSPPTGSLPPP 321
>Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical
protein C53B4.5 protein.
Length = 289
Score = 37.1 bits (82), Expect = 0.018
Identities = 21/62 (33%), Positives = 23/62 (37%), Gaps = 1/62 (1%)
Frame = +3
Query: 579 PPKRXXXGXPPKPXXXPGKXPFXNPLXPXGXPNPKXPPG-GXVFXXXXPPPPGAXLKKXX 755
PP + PP P PG PL P G P P+ P G PP PG
Sbjct: 133 PPCKPCPEGPPGPAGPPGPQGNKGPLGPPGPPGPEGPNGTAGNKGPAGPPGPGGKPGPAG 192
Query: 756 PP 761
PP
Sbjct: 193 PP 194
>AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical
protein C24F3.6 protein.
Length = 291
Score = 36.3 bits (80), Expect = 0.031
Identities = 21/62 (33%), Positives = 23/62 (37%), Gaps = 1/62 (1%)
Frame = +3
Query: 579 PPKRXXXGXPPKPXXXPGKXPFXNPLXPXGXPNPKXPPG-GXVFXXXXPPPPGAXLKKXX 755
PP + PP P PG PL P G P P+ P G PP PG
Sbjct: 135 PPCKPCPEGPPGPAGPPGPDGNKGPLGPPGPPGPEGPNGEPGNKGPAGPPGPGGKPGPAG 194
Query: 756 PP 761
PP
Sbjct: 195 PP 196
Score = 28.7 bits (61), Expect = 6.2
Identities = 16/44 (36%), Positives = 16/44 (36%)
Frame = +3
Query: 606 PPKPXXXPGKXPFXNPLXPXGXPNPKXPPGGXVFXXXXPPPPGA 737
P P PG P P G P P PPG P PGA
Sbjct: 168 PEGPNGEPGNKGPAGPPGPGGKPGPAGPPGEN--GNNGEPQPGA 209
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 35.5 bits (78), Expect = 0.054
Identities = 19/61 (31%), Positives = 25/61 (40%), Gaps = 2/61 (3%)
Frame = +3
Query: 606 PPKPXXXPGKXPFXNPLXPXGXPNPK--XPPGGXVFXXXXPPPPGAXLKKXXPPFLXGGX 779
PP P P P P+ P P+ PP ++ PPPPG + PP + G
Sbjct: 261 PPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPG---RTPGPPGMPGMP 317
Query: 780 P 782
P
Sbjct: 318 P 318
Score = 33.5 bits (73), Expect = 0.22
Identities = 20/75 (26%), Positives = 21/75 (28%)
Frame = +3
Query: 189 PXFPXXKKKKKKGXXXPPXXGGXGXPPPXKXXXXXGXPPXPPXEKKAXFXQXXXXXFFFX 368
P P PP GG PPP G PP PP +
Sbjct: 311 PGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSR 370
Query: 369 PLXPXKXXXKTPPPP 413
P P PPPP
Sbjct: 371 PPAPPSGHGMIPPPP 385
Score = 31.5 bits (68), Expect = 0.88
Identities = 22/65 (33%), Positives = 24/65 (36%), Gaps = 4/65 (6%)
Frame = +3
Query: 579 PPKRXXXGXPPKPXXXPGKXPFXNPLXPXGXPNPKXP----PGGXVFXXXXPPPPGAXLK 746
PP PP P PG+ P P G P P P P G + PPPPG
Sbjct: 288 PPPPSSGMWPPPPPPPPGRTP--GPPGMPGMPPPPPPSRFGPPG-MGGMPPPPPPGMRYP 344
Query: 747 KXXPP 761
PP
Sbjct: 345 GGMPP 349
Score = 30.3 bits (65), Expect = 2.0
Identities = 23/70 (32%), Positives = 23/70 (32%), Gaps = 1/70 (1%)
Frame = +3
Query: 579 PPKRXXXGXPPKPXXXPGKXPFXNPLXPXG-XPNPKXPPGGXVFXXXXPPPPGAXLKKXX 755
PP PP PG P P G P P PP G P PPG
Sbjct: 265 PPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRT-----PGPPGMPGMPPP 319
Query: 756 PPFLXGGXPG 785
PP G PG
Sbjct: 320 PPPSRFGPPG 329
Score = 29.5 bits (63), Expect = 3.6
Identities = 22/72 (30%), Positives = 26/72 (36%), Gaps = 2/72 (2%)
Frame = +3
Query: 573 LXPPKRXXXGXPPKPXXXP--GKXPFXNPLXPXGXPNPKXPPGGXVFXXXXPPPPGAXLK 746
+ PP G P+P P G P P P P P PG PPPP
Sbjct: 273 MPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPG-----MPPPPPP----S 323
Query: 747 KXXPPFLXGGXP 782
+ PP + G P
Sbjct: 324 RFGPPGMGGMPP 335
Score = 29.5 bits (63), Expect = 3.6
Identities = 27/111 (24%), Positives = 29/111 (26%), Gaps = 3/111 (2%)
Frame = +1
Query: 517 PPPXXKTXXPXXXXXGGGVXTPPNXXXGXXPXNPGKXXEKXPFXTLX---PXKGPQTQKX 687
PP T P G PP G P PG P P G
Sbjct: 278 PPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPP 337
Query: 688 PRGXXFFXXXFPPPPGPX*KKXPPXFWXGXPPEXXKKKKRXPPXXXPPGAP 840
P G + PPPP P P + PP PP P
Sbjct: 338 PPGMRYPGGM-PPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPPPPP 387
Score = 28.7 bits (61), Expect = 6.2
Identities = 16/56 (28%), Positives = 18/56 (32%)
Frame = +1
Query: 721 PPPPGPX*KKXPPXFWXGXPPEXXKKKKRXPPXXXPPGAPPLXFPXXGGXXXXXXP 888
PPPP P + P G PP + P P PP GG P
Sbjct: 298 PPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPP 353
Score = 28.7 bits (61), Expect = 6.2
Identities = 19/55 (34%), Positives = 19/55 (34%), Gaps = 4/55 (7%)
Frame = +3
Query: 579 PPKRXXXGXPPKPXXXPGKXPFXNP--LXPXGXPN--PKXPPGGXVFXXXXPPPP 731
PP G P P PG P P P G P PPG PPPP
Sbjct: 298 PPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPP 352
Score = 28.3 bits (60), Expect = 8.2
Identities = 16/52 (30%), Positives = 19/52 (36%)
Frame = +3
Query: 630 GKXPFXNPLXPXGXPNPKXPPGGXVFXXXXPPPPGAXLKKXXPPFLXGGXPG 785
G+ P P P P P P PPPP + + PP G PG
Sbjct: 258 GQYPPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPG 309
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 35.5 bits (78), Expect = 0.054
Identities = 22/62 (35%), Positives = 22/62 (35%), Gaps = 1/62 (1%)
Frame = +3
Query: 579 PPKRXXXGXPPKPXXXPGKXPFXN-PLXPXGXPNPKXPPGGXVFXXXXPPPPGAXLKKXX 755
PP G PP P P P G P P PPGG PPPP K
Sbjct: 727 PPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGC--PPPPPPPPPGGFKGGP 784
Query: 756 PP 761
PP
Sbjct: 785 PP 786
Score = 33.9 bits (74), Expect = 0.17
Identities = 22/65 (33%), Positives = 24/65 (36%), Gaps = 2/65 (3%)
Frame = +3
Query: 579 PPKRXXXGXPPKPXXXPGKXPFXNPLXPXGXPNPKXPPGGXVFXXXXPPPPG--AXLKKX 752
PP G PP P P P P P PPGG PPPPG A +
Sbjct: 743 PPPPPPGGLPPISGGPPPPPPPPGGCPP---PPPPPPPGGFKGGPPPPPPPGMFAPMAPV 799
Query: 753 XPPFL 767
P +L
Sbjct: 800 IPDYL 804
Score = 31.5 bits (68), Expect = 0.88
Identities = 26/71 (36%), Positives = 26/71 (36%), Gaps = 9/71 (12%)
Frame = +3
Query: 600 GXPPKPXXXP---GKXPFXNP--LXPX-GXPNPKXPPGGXV---FXXXXPPPPGAXLKKX 752
G PP P P G P P L P G P P PPGG PPPP
Sbjct: 712 GPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPP 771
Query: 753 XPPFLXGGXPG 785
PP GG G
Sbjct: 772 PPPPPPGGFKG 782
Score = 29.9 bits (64), Expect = 2.7
Identities = 31/107 (28%), Positives = 31/107 (28%), Gaps = 1/107 (0%)
Frame = +1
Query: 517 PPPXXKTXXPXXXXXGGGVXTPPNXXXGXXPXNPGKXXEKXPFXTLXPXKG-PQTQKXPR 693
PPP GG PP G P PG L P G P P
Sbjct: 686 PPPTKMNLSAPSTSAGGSSALPP--ITGGPPPPPG----------LPPITGGPPPPPPPG 733
Query: 694 GXXFFXXXFPPPPGPX*KKXPPXFWXGXPPEXXKKKKRXPPXXXPPG 834
G PPPP P PP PP PP PPG
Sbjct: 734 GLPPITGGPPPPPPPG--GLPPISGGPPPPPPPPGGCPPPPPPPPPG 778
Score = 29.9 bits (64), Expect = 2.7
Identities = 23/61 (37%), Positives = 24/61 (39%)
Frame = +3
Query: 600 GXPPKPXXXPGKXPFXNPLXPXGXPNPKXPPGGXVFXXXXPPPPGAXLKKXXPPFLXGGX 779
G PP P PG P G P P PPGG PPPP PP + GG
Sbjct: 711 GGPPPP---PGLPPIT------GGPPPPPPPGGLPPITGGPPPPPP--PGGLPP-ISGGP 758
Query: 780 P 782
P
Sbjct: 759 P 759
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 35.5 bits (78), Expect = 0.054
Identities = 22/62 (35%), Positives = 22/62 (35%), Gaps = 1/62 (1%)
Frame = +3
Query: 579 PPKRXXXGXPPKPXXXPGKXPFXN-PLXPXGXPNPKXPPGGXVFXXXXPPPPGAXLKKXX 755
PP G PP P P P G P P PPGG PPPP K
Sbjct: 727 PPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGC--PPPPPPPPPGGFKGGP 784
Query: 756 PP 761
PP
Sbjct: 785 PP 786
Score = 33.9 bits (74), Expect = 0.17
Identities = 22/65 (33%), Positives = 24/65 (36%), Gaps = 2/65 (3%)
Frame = +3
Query: 579 PPKRXXXGXPPKPXXXPGKXPFXNPLXPXGXPNPKXPPGGXVFXXXXPPPPG--AXLKKX 752
PP G PP P P P P P PPGG PPPPG A +
Sbjct: 743 PPPPPPGGLPPISGGPPPPPPPPGGCPP---PPPPPPPGGFKGGPPPPPPPGMFAPMAPV 799
Query: 753 XPPFL 767
P +L
Sbjct: 800 IPDYL 804
Score = 31.5 bits (68), Expect = 0.88
Identities = 26/71 (36%), Positives = 26/71 (36%), Gaps = 9/71 (12%)
Frame = +3
Query: 600 GXPPKPXXXP---GKXPFXNP--LXPX-GXPNPKXPPGGXV---FXXXXPPPPGAXLKKX 752
G PP P P G P P L P G P P PPGG PPPP
Sbjct: 712 GPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPP 771
Query: 753 XPPFLXGGXPG 785
PP GG G
Sbjct: 772 PPPPPPGGFKG 782
Score = 29.9 bits (64), Expect = 2.7
Identities = 31/107 (28%), Positives = 31/107 (28%), Gaps = 1/107 (0%)
Frame = +1
Query: 517 PPPXXKTXXPXXXXXGGGVXTPPNXXXGXXPXNPGKXXEKXPFXTLXPXKG-PQTQKXPR 693
PPP GG PP G P PG L P G P P
Sbjct: 686 PPPTKMNLSAPSTSAGGSSALPP--ITGGPPPPPG----------LPPITGGPPPPPPPG 733
Query: 694 GXXFFXXXFPPPPGPX*KKXPPXFWXGXPPEXXKKKKRXPPXXXPPG 834
G PPPP P PP PP PP PPG
Sbjct: 734 GLPPITGGPPPPPPPG--GLPPISGGPPPPPPPPGGCPPPPPPPPPG 778
Score = 29.9 bits (64), Expect = 2.7
Identities = 23/61 (37%), Positives = 24/61 (39%)
Frame = +3
Query: 600 GXPPKPXXXPGKXPFXNPLXPXGXPNPKXPPGGXVFXXXXPPPPGAXLKKXXPPFLXGGX 779
G PP P PG P G P P PPGG PPPP PP + GG
Sbjct: 711 GGPPPP---PGLPPIT------GGPPPPPPPGGLPPITGGPPPPPP--PGGLPP-ISGGP 758
Query: 780 P 782
P
Sbjct: 759 P 759
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 35.5 bits (78), Expect = 0.054
Identities = 19/61 (31%), Positives = 25/61 (40%), Gaps = 2/61 (3%)
Frame = +3
Query: 606 PPKPXXXPGKXPFXNPLXPXGXPNPK--XPPGGXVFXXXXPPPPGAXLKKXXPPFLXGGX 779
PP P P P P+ P P+ PP ++ PPPPG + PP + G
Sbjct: 271 PPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPG---RTPGPPGMPGMP 327
Query: 780 P 782
P
Sbjct: 328 P 328
Score = 33.5 bits (73), Expect = 0.22
Identities = 20/75 (26%), Positives = 21/75 (28%)
Frame = +3
Query: 189 PXFPXXKKKKKKGXXXPPXXGGXGXPPPXKXXXXXGXPPXPPXEKKAXFXQXXXXXFFFX 368
P P PP GG PPP G PP PP +
Sbjct: 321 PGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSR 380
Query: 369 PLXPXKXXXKTPPPP 413
P P PPPP
Sbjct: 381 PPAPPSGHGMIPPPP 395
Score = 31.5 bits (68), Expect = 0.88
Identities = 22/65 (33%), Positives = 24/65 (36%), Gaps = 4/65 (6%)
Frame = +3
Query: 579 PPKRXXXGXPPKPXXXPGKXPFXNPLXPXGXPNPKXP----PGGXVFXXXXPPPPGAXLK 746
PP PP P PG+ P P G P P P P G + PPPPG
Sbjct: 298 PPPPSSGMWPPPPPPPPGRTP--GPPGMPGMPPPPPPSRFGPPG-MGGMPPPPPPGMRYP 354
Query: 747 KXXPP 761
PP
Sbjct: 355 GGMPP 359
Score = 30.3 bits (65), Expect = 2.0
Identities = 23/70 (32%), Positives = 23/70 (32%), Gaps = 1/70 (1%)
Frame = +3
Query: 579 PPKRXXXGXPPKPXXXPGKXPFXNPLXPXG-XPNPKXPPGGXVFXXXXPPPPGAXLKKXX 755
PP PP PG P P G P P PP G P PPG
Sbjct: 275 PPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRT-----PGPPGMPGMPPP 329
Query: 756 PPFLXGGXPG 785
PP G PG
Sbjct: 330 PPPSRFGPPG 339
Score = 29.5 bits (63), Expect = 3.6
Identities = 22/72 (30%), Positives = 26/72 (36%), Gaps = 2/72 (2%)
Frame = +3
Query: 573 LXPPKRXXXGXPPKPXXXP--GKXPFXNPLXPXGXPNPKXPPGGXVFXXXXPPPPGAXLK 746
+ PP G P+P P G P P P P P PG PPPP
Sbjct: 283 MPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPG-----MPPPPPP----S 333
Query: 747 KXXPPFLXGGXP 782
+ PP + G P
Sbjct: 334 RFGPPGMGGMPP 345
Score = 29.5 bits (63), Expect = 3.6
Identities = 27/111 (24%), Positives = 29/111 (26%), Gaps = 3/111 (2%)
Frame = +1
Query: 517 PPPXXKTXXPXXXXXGGGVXTPPNXXXGXXPXNPGKXXEKXPFXTLX---PXKGPQTQKX 687
PP T P G PP G P PG P P G
Sbjct: 288 PPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPP 347
Query: 688 PRGXXFFXXXFPPPPGPX*KKXPPXFWXGXPPEXXKKKKRXPPXXXPPGAP 840
P G + PPPP P P + PP PP P
Sbjct: 348 PPGMRYPGGM-PPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPPPPP 397
Score = 28.7 bits (61), Expect = 6.2
Identities = 16/56 (28%), Positives = 18/56 (32%)
Frame = +1
Query: 721 PPPPGPX*KKXPPXFWXGXPPEXXKKKKRXPPXXXPPGAPPLXFPXXGGXXXXXXP 888
PPPP P + P G PP + P P PP GG P
Sbjct: 308 PPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPP 363
Score = 28.7 bits (61), Expect = 6.2
Identities = 19/55 (34%), Positives = 19/55 (34%), Gaps = 4/55 (7%)
Frame = +3
Query: 579 PPKRXXXGXPPKPXXXPGKXPFXNP--LXPXGXPN--PKXPPGGXVFXXXXPPPP 731
PP G P P PG P P P G P PPG PPPP
Sbjct: 308 PPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPP 362
Score = 28.3 bits (60), Expect = 8.2
Identities = 16/52 (30%), Positives = 19/52 (36%)
Frame = +3
Query: 630 GKXPFXNPLXPXGXPNPKXPPGGXVFXXXXPPPPGAXLKKXXPPFLXGGXPG 785
G+ P P P P P P PPPP + + PP G PG
Sbjct: 268 GQYPPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPG 319
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 35.5 bits (78), Expect = 0.054
Identities = 22/62 (35%), Positives = 22/62 (35%), Gaps = 1/62 (1%)
Frame = +3
Query: 579 PPKRXXXGXPPKPXXXPGKXPFXN-PLXPXGXPNPKXPPGGXVFXXXXPPPPGAXLKKXX 755
PP G PP P P P G P P PPGG PPPP K
Sbjct: 310 PPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGC--PPPPPPPPPGGFKGGP 367
Query: 756 PP 761
PP
Sbjct: 368 PP 369
Score = 33.9 bits (74), Expect = 0.17
Identities = 22/65 (33%), Positives = 24/65 (36%), Gaps = 2/65 (3%)
Frame = +3
Query: 579 PPKRXXXGXPPKPXXXPGKXPFXNPLXPXGXPNPKXPPGGXVFXXXXPPPPG--AXLKKX 752
PP G PP P P P P P PPGG PPPPG A +
Sbjct: 326 PPPPPPGGLPPISGGPPPPPPPPGGCPP---PPPPPPPGGFKGGPPPPPPPGMFAPMAPV 382
Query: 753 XPPFL 767
P +L
Sbjct: 383 IPDYL 387
Score = 31.5 bits (68), Expect = 0.88
Identities = 26/71 (36%), Positives = 26/71 (36%), Gaps = 9/71 (12%)
Frame = +3
Query: 600 GXPPKPXXXP---GKXPFXNP--LXPX-GXPNPKXPPGGXV---FXXXXPPPPGAXLKKX 752
G PP P P G P P L P G P P PPGG PPPP
Sbjct: 295 GPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPP 354
Query: 753 XPPFLXGGXPG 785
PP GG G
Sbjct: 355 PPPPPPGGFKG 365
Score = 29.9 bits (64), Expect = 2.7
Identities = 31/107 (28%), Positives = 31/107 (28%), Gaps = 1/107 (0%)
Frame = +1
Query: 517 PPPXXKTXXPXXXXXGGGVXTPPNXXXGXXPXNPGKXXEKXPFXTLXPXKG-PQTQKXPR 693
PPP GG PP G P PG L P G P P
Sbjct: 269 PPPTKMNLSAPSTSAGGSSALPP--ITGGPPPPPG----------LPPITGGPPPPPPPG 316
Query: 694 GXXFFXXXFPPPPGPX*KKXPPXFWXGXPPEXXKKKKRXPPXXXPPG 834
G PPPP P PP PP PP PPG
Sbjct: 317 GLPPITGGPPPPPPPG--GLPPISGGPPPPPPPPGGCPPPPPPPPPG 361
Score = 29.9 bits (64), Expect = 2.7
Identities = 23/61 (37%), Positives = 24/61 (39%)
Frame = +3
Query: 600 GXPPKPXXXPGKXPFXNPLXPXGXPNPKXPPGGXVFXXXXPPPPGAXLKKXXPPFLXGGX 779
G PP P PG P G P P PPGG PPPP PP + GG
Sbjct: 294 GGPPPP---PGLPPIT------GGPPPPPPPGGLPPITGGPPPPPP--PGGLPP-ISGGP 341
Query: 780 P 782
P
Sbjct: 342 P 342
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 34.3 bits (75), Expect = 0.12
Identities = 20/58 (34%), Positives = 21/58 (36%)
Frame = +1
Query: 721 PPPPGPX*KKXPPXFWXGXPPEXXKKKKRXPPXXXPPGAPPLXFPXXGGXXXXXXPFP 894
PPPPGP PP + G P PP GAPP P G P P
Sbjct: 75 PPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPPPPSGLGVAPQPPRP 132
Score = 29.9 bits (64), Expect = 2.7
Identities = 20/55 (36%), Positives = 23/55 (41%)
Frame = +3
Query: 579 PPKRXXXGXPPKPXXXPGKXPFXNPLXPXGXPNPKXPPGGXVFXXXXPPPPGAXL 743
PP G PP P G P P+ G P P PP +F PPPP + L
Sbjct: 75 PPPPGPGGIPPPPPMFAGGIPPPPPMM-GGIPPP--PP---MFGAPPPPPPPSGL 123
Score = 29.9 bits (64), Expect = 2.7
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = -1
Query: 310 GXGGXPXXXXXFXGGGXPXPPXXGGXXXP 224
G GG P F GG P PP GG P
Sbjct: 79 GPGGIPPPPPMFAGGIPPPPPMMGGIPPP 107
Score = 29.5 bits (63), Expect = 3.6
Identities = 19/62 (30%), Positives = 20/62 (32%)
Frame = +2
Query: 512 FSPPPXXKHXXPXXXGXGGGFXPPQTXXXGXPPXTXXXPXKKXLXXPFXPXRXPKPKKXP 691
F PPP P G GG PP G PP P + P P P P
Sbjct: 64 FIPPPVPNGFIPPPPGPGGIPPPPPMFAGGIPP---PPPMMGGIPPPPPMFGAPPPPPPP 120
Query: 692 GG 697
G
Sbjct: 121 SG 122
>Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical
protein F23H12.4 protein.
Length = 301
Score = 33.9 bits (74), Expect = 0.17
Identities = 19/44 (43%), Positives = 19/44 (43%), Gaps = 1/44 (2%)
Frame = +3
Query: 606 PPKPXXXPGKXPFXNPLXPXGXPNPKXPPGGXVFXXXXPP-PPG 734
PP P PG P P G P P PPG V PP PPG
Sbjct: 231 PPGPPGAPGNDGPPGPPGPKGAPGPDGPPG--VDGQSGPPGPPG 272
Score = 29.5 bits (63), Expect = 3.6
Identities = 24/72 (33%), Positives = 24/72 (33%), Gaps = 3/72 (4%)
Frame = +3
Query: 579 PPKRXXXGXPPKPXXXPGKXPFXNPLXP--XGXPNPKXPPGGXVFXXXXPPPPGAXLKKX 752
PP P P PG PL P G P PPG P PPGA
Sbjct: 190 PPGPAGEAGAPGPAGEPGTPAISEPLTPGAPGEPGDSGPPG-------PPGPPGAPGNDG 242
Query: 753 XP-PFLXGGXPG 785
P P G PG
Sbjct: 243 PPGPPGPKGAPG 254
>V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-1 coding for a collagen.
).
Length = 296
Score = 33.5 bits (73), Expect = 0.22
Identities = 17/43 (39%), Positives = 17/43 (39%)
Frame = +3
Query: 606 PPKPXXXPGKXPFXNPLXPXGXPNPKXPPGGXVFXXXXPPPPG 734
PP P PG P P G P P PPG P PPG
Sbjct: 226 PPGPPGAPGNDGPPGPPGPKGAPGPDGPPGAD-GQSGPPGPPG 267
Score = 29.5 bits (63), Expect = 3.6
Identities = 24/72 (33%), Positives = 24/72 (33%), Gaps = 3/72 (4%)
Frame = +3
Query: 579 PPKRXXXGXPPKPXXXPGKXPFXNPLXP--XGXPNPKXPPGGXVFXXXXPPPPGAXLKKX 752
PP P P PG PL P G P PPG P PPGA
Sbjct: 185 PPGPAGEAGAPGPAGEPGTPAISEPLTPGAPGEPGDSGPPG-------PPGPPGAPGNDG 237
Query: 753 XP-PFLXGGXPG 785
P P G PG
Sbjct: 238 PPGPPGPKGAPG 249
>J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 1 (col-1) gene, complete
cds. ).
Length = 296
Score = 33.5 bits (73), Expect = 0.22
Identities = 17/43 (39%), Positives = 17/43 (39%)
Frame = +3
Query: 606 PPKPXXXPGKXPFXNPLXPXGXPNPKXPPGGXVFXXXXPPPPG 734
PP P PG P P G P P PPG P PPG
Sbjct: 226 PPGPPGAPGNDGPPGPPGPKGAPGPDGPPGAD-GQSGPPGPPG 267
Score = 29.5 bits (63), Expect = 3.6
Identities = 24/72 (33%), Positives = 24/72 (33%), Gaps = 3/72 (4%)
Frame = +3
Query: 579 PPKRXXXGXPPKPXXXPGKXPFXNPLXP--XGXPNPKXPPGGXVFXXXXPPPPGAXLKKX 752
PP P P PG PL P G P PPG P PPGA
Sbjct: 185 PPGPAGEAGAPGPAGEPGTPAISEPLTPGAPGEPGDSGPPG-------PPGPPGAPGNDG 237
Query: 753 XP-PFLXGGXPG 785
P P G PG
Sbjct: 238 PPGPPGPKGAPG 249
>Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1759
Score = 32.7 bits (71), Expect = 0.38
Identities = 17/43 (39%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
Frame = +3
Query: 660 PXGXPNPKXPPGGXVFXXXXPPPPGAXLKKXXP-PFLXGGXPG 785
P G P PPGG F P PPG + P P G PG
Sbjct: 348 PKGNSGPPGPPGGGTFNDGAPGPPGLPGRPGNPGPPGTDGYPG 390
>Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1758
Score = 32.7 bits (71), Expect = 0.38
Identities = 17/43 (39%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
Frame = +3
Query: 660 PXGXPNPKXPPGGXVFXXXXPPPPGAXLKKXXP-PFLXGGXPG 785
P G P PPGG F P PPG + P P G PG
Sbjct: 347 PKGNSGPPGPPGGGTFNDGAPGPPGLPGRPGNPGPPGTDGYPG 389
>U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein 2,
isoform a protein.
Length = 1758
Score = 32.7 bits (71), Expect = 0.38
Identities = 17/43 (39%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
Frame = +3
Query: 660 PXGXPNPKXPPGGXVFXXXXPPPPGAXLKKXXP-PFLXGGXPG 785
P G P PPGG F P PPG + P P G PG
Sbjct: 347 PKGNSGPPGPPGGGTFNDGAPGPPGLPGRPGNPGPPGTDGYPG 389
>U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein 2,
isoform b protein.
Length = 1759
Score = 32.7 bits (71), Expect = 0.38
Identities = 17/43 (39%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
Frame = +3
Query: 660 PXGXPNPKXPPGGXVFXXXXPPPPGAXLKKXXP-PFLXGGXPG 785
P G P PPGG F P PPG + P P G PG
Sbjct: 348 PKGNSGPPGPPGGGTFNDGAPGPPGLPGRPGNPGPPGTDGYPG 390
>U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV)
collagen protein.
Length = 1795
Score = 32.7 bits (71), Expect = 0.38
Identities = 17/43 (39%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
Frame = +3
Query: 660 PXGXPNPKXPPGGXVFXXXXPPPPGAXLKKXXP-PFLXGGXPG 785
P G P PPGG F P PPG + P P G PG
Sbjct: 384 PKGNSGPPGPPGGGTFNDGAPGPPGLPGRPGNPGPPGTDGYPG 426
>Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical
protein B0035.1b protein.
Length = 341
Score = 32.3 bits (70), Expect = 0.50
Identities = 25/91 (27%), Positives = 29/91 (31%)
Frame = +1
Query: 583 PNXXXGXXPXNPGKXXEKXPFXTLXPXKGPQTQKXPRGXXFFXXXFPPPPGPX*KKXPPX 762
P G P + P + P P PRG +PP P P PP
Sbjct: 127 PPMPSGPPPPSMAYGMPPMPSGMMPPRGMPGAYPPPRG-------YPPAPAPGVYMPPPG 179
Query: 763 FWXGXPPEXXKKKKRXPPXXXPPGAPPLXFP 855
PP R P PPG PP+ P
Sbjct: 180 MPGAYPP------PRMPIGHGPPGGPPMPGP 204
>Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical
protein B0035.1a protein.
Length = 298
Score = 32.3 bits (70), Expect = 0.50
Identities = 25/91 (27%), Positives = 29/91 (31%)
Frame = +1
Query: 583 PNXXXGXXPXNPGKXXEKXPFXTLXPXKGPQTQKXPRGXXFFXXXFPPPPGPX*KKXPPX 762
P G P + P + P P PRG +PP P P PP
Sbjct: 127 PPMPSGPPPPSMAYGMPPMPSGMMPPRGMPGAYPPPRG-------YPPAPAPGVYMPPPG 179
Query: 763 FWXGXPPEXXKKKKRXPPXXXPPGAPPLXFP 855
PP R P PPG PP+ P
Sbjct: 180 MPGAYPP------PRMPIGHGPPGGPPMPGP 204
>Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical
protein T04F8.8 protein.
Length = 165
Score = 31.9 bits (69), Expect = 0.67
Identities = 20/68 (29%), Positives = 26/68 (38%), Gaps = 1/68 (1%)
Frame = +2
Query: 491 GGRXFXXFSPPPXXKHXXPXXXGXGGGFXPPQ-TXXXGXPPXTXXXPXKKXLXXPFXPXR 667
GG + PP + P G GGG+ PQ PP T P + P P
Sbjct: 62 GGNNYNNGPPPFDGGYNRPYGGGGGGGYGRPQGYVPPPPPPPTQPEPEPEPRPEP-QPEP 120
Query: 668 XPKPKKXP 691
P+P+ P
Sbjct: 121 QPEPQPEP 128
>U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protein
43 protein.
Length = 303
Score = 30.7 bits (66), Expect = 1.5
Identities = 18/44 (40%), Positives = 18/44 (40%), Gaps = 1/44 (2%)
Frame = +3
Query: 606 PPKPXXXPGKXPFXNPLXPXGXPNPKXPPGGXVFXXXXPP-PPG 734
PP P PG P P G P P P G V PP PPG
Sbjct: 233 PPGPPGAPGNDGPPGPPGPKGSPGPDGPAG--VDGQAGPPGPPG 274
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 30.7 bits (66), Expect = 1.5
Identities = 21/61 (34%), Positives = 21/61 (34%), Gaps = 2/61 (3%)
Frame = +1
Query: 718 FPPPP--GPX*KKXPPXFWXGXPPEXXKKKKRXPPXXXPPGAPPLXFPXXGGXXXXXXPF 891
F PPP GP PP G P PP PGAP P GG P
Sbjct: 378 FAPPPQSGPPGAFAPPPSAFGAPQGPGGPGGYGPPPPGGPGAPGSYGPPQGGPGGFGPPP 437
Query: 892 P 894
P
Sbjct: 438 P 438
>AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen
protein.
Length = 303
Score = 30.7 bits (66), Expect = 1.5
Identities = 18/44 (40%), Positives = 18/44 (40%), Gaps = 1/44 (2%)
Frame = +3
Query: 606 PPKPXXXPGKXPFXNPLXPXGXPNPKXPPGGXVFXXXXPP-PPG 734
PP P PG P P G P P P G V PP PPG
Sbjct: 233 PPGPPGAPGNDGPPGPPGPKGSPGPDGPAG--VDGQAGPPGPPG 274
>Z95559-1|CAB08999.1| 289|Caenorhabditis elegans Hypothetical
protein Y41E3.2 protein.
Length = 289
Score = 30.3 bits (65), Expect = 2.0
Identities = 19/58 (32%), Positives = 22/58 (37%)
Frame = +1
Query: 667 GPQTQKXPRGXXFFXXXFPPPPGPX*KKXPPXFWXGXPPEXXKKKKRXPPXXXPPGAP 840
GP ++ P+G P P GP PP G P E K P PPG P
Sbjct: 156 GPPGEQGPKGPDAAPGE-PGPKGPIGPPGPPG-QAGAPGEPGSPAKSEPAVPGPPGPP 211
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 29.9 bits (64), Expect = 2.7
Identities = 15/51 (29%), Positives = 20/51 (39%)
Frame = +3
Query: 609 PKPXXXPGKXPFXNPLXPXGXPNPKXPPGGXVFXXXXPPPPGAXLKKXXPP 761
P P + P P+ P P+P PPG P PPG ++ P
Sbjct: 217 PSEDPKPSEPPSPGPVDPSDEPSPSDPPG-------PPGPPGPPTRRPPGP 260
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 29.9 bits (64), Expect = 2.7
Identities = 18/66 (27%), Positives = 24/66 (36%)
Frame = +1
Query: 658 PXKGPQTQKXPRGXXFFXXXFPPPPGPX*KKXPPXFWXGXPPEXXKKKKRXPPXXXPPGA 837
P G + + P PPPP P +K PP + + PP PP
Sbjct: 101 PVPGQEGHQVPAPQHGDHEASPPPPPPP-RKSRAGGSSPPPPPPPRVPRTPPPRSPPPRR 159
Query: 838 PPLXFP 855
PP+ P
Sbjct: 160 PPMTPP 165
>AL031629-6|CAA20980.2| 948|Caenorhabditis elegans Hypothetical
protein Y106G6D.7 protein.
Length = 948
Score = 29.9 bits (64), Expect = 2.7
Identities = 18/51 (35%), Positives = 20/51 (39%), Gaps = 4/51 (7%)
Frame = +1
Query: 727 PPGPX*KKXPPXFWXGXPPEXXKKKKRXPPXXXPPGA----PPLXFPXXGG 867
PPG + PP F G PP + P PP A PP FP G
Sbjct: 367 PPGNLGRNGPPPFQAGVPPPVIQNNMGRP--IAPPAAMVRPPPQNFPGGAG 415
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 29.5 bits (63), Expect = 3.6
Identities = 24/71 (33%), Positives = 25/71 (35%), Gaps = 5/71 (7%)
Frame = +3
Query: 579 PPKRXXXGXPPKPXXXPGKXPFXNPLXPXG-XPNPKXPP-GGXVFXXXXPPPP---GAXL 743
PP G PP P P + P G PN PP F PPPP GA
Sbjct: 707 PPPPGIPGYPPAPPPPGVGPPPPQGIPPMGFDPNKPPPPMFQQGFNAGAPPPPFGRGAGP 766
Query: 744 KKXXPPFLXGG 776
PP GG
Sbjct: 767 MSSFPPPPRGG 777
>Z83120-6|CAB76722.1| 809|Caenorhabditis elegans Hypothetical
protein R06A4.9 protein.
Length = 809
Score = 29.1 bits (62), Expect = 4.7
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +2
Query: 518 PPPXXKHXXPXXXGXGGGFXPP 583
PPP +H P G G G+ PP
Sbjct: 600 PPPNWRHQGPPMSGPGQGYGPP 621
>AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical
protein Y113G7B.23 protein.
Length = 789
Score = 29.1 bits (62), Expect = 4.7
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +3
Query: 240 PXXGGXGXPPPXKXXXXXGXPPXP 311
P GG G PPP + G PP P
Sbjct: 673 PPGGGQGPPPPPQGQQYYGGPPPP 696
>AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like
protein protein.
Length = 789
Score = 29.1 bits (62), Expect = 4.7
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +3
Query: 240 PXXGGXGXPPPXKXXXXXGXPPXP 311
P GG G PPP + G PP P
Sbjct: 673 PPGGGQGPPPPPQGQQYYGGPPPP 696
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 28.7 bits (61), Expect = 6.2
Identities = 22/70 (31%), Positives = 25/70 (35%), Gaps = 4/70 (5%)
Frame = +1
Query: 658 PXKGPQTQKXPRGXXFFXXXFPPPPG---PX*KKXPPXFWXGXPPEXXKKKKRXPPXXXP 828
P + P Q P+ F PPPG P PP W PP + P P
Sbjct: 56 PYEHPAQQHPPQHHSVPPNSFAPPPGQHHPQHPGMPPMEW--RPPGAEYQMPPGYPAGYP 113
Query: 829 P-GAPPLXFP 855
P G PP P
Sbjct: 114 PYGMPPRHHP 123
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 28.7 bits (61), Expect = 6.2
Identities = 25/76 (32%), Positives = 26/76 (34%), Gaps = 7/76 (9%)
Frame = +3
Query: 579 PPKRXXXGXPPK--PXXXPGKXPFXNPLXPXGXPNPKXP----PGGXVFXXXXPPP-PGA 737
PP G PP+ P G F P P G P P P G PPP G
Sbjct: 101 PPPGMPGGVPPQAQPFNPHGGSMFGGPGGPGGPPPFGQPFQQAPQGMFNVPTGPPPLMGG 160
Query: 738 XLKKXXPPFLXGGXPG 785
PP GG PG
Sbjct: 161 GGDPRGPPGGMGGPPG 176
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 28.7 bits (61), Expect = 6.2
Identities = 25/76 (32%), Positives = 26/76 (34%), Gaps = 7/76 (9%)
Frame = +3
Query: 579 PPKRXXXGXPPK--PXXXPGKXPFXNPLXPXGXPNPKXP----PGGXVFXXXXPPP-PGA 737
PP G PP+ P G F P P G P P P G PPP G
Sbjct: 381 PPPGMPGGVPPQAQPFNPHGGSMFGGPGGPGGPPPFGQPFQQAPQGMFNVPTGPPPLMGG 440
Query: 738 XLKKXXPPFLXGGXPG 785
PP GG PG
Sbjct: 441 GGDPRGPPGGMGGPPG 456
>AL132864-1|CAB63392.1| 613|Caenorhabditis elegans Hypothetical
protein Y53H1A.1 protein.
Length = 613
Score = 28.7 bits (61), Expect = 6.2
Identities = 21/84 (25%), Positives = 25/84 (29%), Gaps = 7/84 (8%)
Frame = +1
Query: 664 KGPQTQKXPRGXXFFXXXFPPPPGPX*KKXPPXFWXGXPPEXXK-------KKKRXPPXX 822
+GP P G + PP P W G PP + PP
Sbjct: 76 RGPPGPSGPSGPPVYHNQGPPRGYPPPPPQGADTWRGAPPPAHHGHFGPPGHHFQGPPQH 135
Query: 823 XPPGAPPLXFPXXGGXXXXXXPFP 894
PPG P FP G +P
Sbjct: 136 FPPGPPRPHFPGPPGPHRPPEHYP 159
>AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen protein
68 protein.
Length = 329
Score = 28.7 bits (61), Expect = 6.2
Identities = 25/76 (32%), Positives = 28/76 (36%), Gaps = 7/76 (9%)
Frame = +3
Query: 579 PPKRXXXGXPPKPXXXPGKX--PFXNPLX-PXGXPNPKXPPG--GXVFXXXXPPPPGAXL 743
PP P P PG P N L P G P P+ PPG G P PG +
Sbjct: 190 PPGPPGKQGPKGPNGEPGAPGTPGGNALPGPPGPPGPQGPPGADGLPGNPGAPGVPGQVI 249
Query: 744 KKXXPPFLXG--GXPG 785
+ P G G PG
Sbjct: 250 EVPGTPGPAGPPGPPG 265
>Z95621-2|CAB09131.1| 330|Caenorhabditis elegans Hypothetical
protein ZK863.2 protein.
Length = 330
Score = 28.3 bits (60), Expect = 8.2
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +3
Query: 606 PPKPXXXPGKXPFXNPLXPXGXPNPKXPPG 695
PP P PG P P G P P PG
Sbjct: 182 PPGPDGAPGGGSGPGPAGPAGPPGPDGNPG 211
>Z95559-8|CAB54437.1| 720|Caenorhabditis elegans Hypothetical
protein Y41E3.16 protein.
Length = 720
Score = 28.3 bits (60), Expect = 8.2
Identities = 15/39 (38%), Positives = 17/39 (43%), Gaps = 1/39 (2%)
Frame = +3
Query: 672 PNPKXP-PGGXVFXXXXPPPPGAXLKKXXPPFLXGGXPG 785
P+PK P G F PPPP K P + GG G
Sbjct: 480 PSPKAQYPTGVFFNQPLPPPPAHPPKIGAHPLVMGGGGG 518
>Z78019-9|CAB01457.1| 330|Caenorhabditis elegans Hypothetical
protein ZK863.2 protein.
Length = 330
Score = 28.3 bits (60), Expect = 8.2
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +3
Query: 606 PPKPXXXPGKXPFXNPLXPXGXPNPKXPPG 695
PP P PG P P G P P PG
Sbjct: 182 PPGPDGAPGGGSGPGPAGPAGPPGPDGNPG 211
>Z46791-4|CAA86758.1| 317|Caenorhabditis elegans Hypothetical
protein C09G5.5 protein.
Length = 317
Score = 28.3 bits (60), Expect = 8.2
Identities = 13/39 (33%), Positives = 13/39 (33%)
Frame = +3
Query: 579 PPKRXXXGXPPKPXXXPGKXPFXNPLXPXGXPNPKXPPG 695
P R PP PG P P G P P PG
Sbjct: 206 PSGRPGPQGPPGAPGQPGSGSTPGPAGPPGPPGPNGQPG 244
>U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protein
34 protein.
Length = 299
Score = 28.3 bits (60), Expect = 8.2
Identities = 22/73 (30%), Positives = 24/73 (32%), Gaps = 4/73 (5%)
Frame = +3
Query: 579 PPKRXXXGXPPKPXXXPGKXPFXNPLXPXGXPNPKXPPG--GXVFXXXXPPPPGAXLKKX 752
PP PP PG G P PK PPG G P PG +
Sbjct: 152 PPGPPGPPGPPGDSGEPGSPGLPGQDAAPGEPGPKGPPGPPGAPGAPGTPGEPGVPAQS- 210
Query: 753 XPPFLXG--GXPG 785
P + G G PG
Sbjct: 211 -EPLIPGEPGPPG 222
>U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astacin
protease protein33 protein.
Length = 644
Score = 28.3 bits (60), Expect = 8.2
Identities = 16/41 (39%), Positives = 17/41 (41%)
Frame = +1
Query: 721 PPPPGPX*KKXPPXFWXGXPPEXXKKKKRXPPXXXPPGAPP 843
PPP GP PP + PP R PP PP PP
Sbjct: 50 PPPFGP-----PPPWDRPPPPWRRPPWHRRPPWGLPPPPPP 85
>AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular
collagen RAM-4 protein.
Length = 299
Score = 28.3 bits (60), Expect = 8.2
Identities = 22/73 (30%), Positives = 24/73 (32%), Gaps = 4/73 (5%)
Frame = +3
Query: 579 PPKRXXXGXPPKPXXXPGKXPFXNPLXPXGXPNPKXPPG--GXVFXXXXPPPPGAXLKKX 752
PP PP PG G P PK PPG G P PG +
Sbjct: 152 PPGPPGPPGPPGDSGEPGSPGLPGQDAAPGEPGPKGPPGPPGAPGAPGTPGEPGVPAQS- 210
Query: 753 XPPFLXG--GXPG 785
P + G G PG
Sbjct: 211 -EPLIPGEPGPPG 222
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 28.3 bits (60), Expect = 8.2
Identities = 15/41 (36%), Positives = 16/41 (39%)
Frame = +1
Query: 721 PPPPGPX*KKXPPXFWXGXPPEXXKKKKRXPPXXXPPGAPP 843
PPP G + PP G PP PP P G PP
Sbjct: 1574 PPPRGGSHCQGPPPLMGGPPPRLGMPPPGPPP---PNGGPP 1611
>AF000198-7|AAB53052.1| 418|Caenorhabditis elegans Collagen protein
50 protein.
Length = 418
Score = 28.3 bits (60), Expect = 8.2
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = +3
Query: 606 PPKPXXXPGKXPFXNPLXPXGXPNPKXPPG 695
PP P G+ + P P G P P PPG
Sbjct: 243 PPGPAGPAGEDAYAQP-SPAGTPGPPGPPG 271
>AC006638-2|AAK85481.1| 1256|Caenorhabditis elegans Cyclase associated
protein homologprotein 1, isoform a protein.
Length = 1256
Score = 28.3 bits (60), Expect = 8.2
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +3
Query: 651 PLXPXGXPNPKXPPGGXVFXXXXPPPPGA 737
P P G P P PP F PPP A
Sbjct: 1006 PAGPGGPPPPPPPPPADFFANIAPPPVDA 1034
>AC006638-1|AAK85482.1| 495|Caenorhabditis elegans Cyclase
associated protein homologprotein 1, isoform b protein.
Length = 495
Score = 28.3 bits (60), Expect = 8.2
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +3
Query: 651 PLXPXGXPNPKXPPGGXVFXXXXPPPPGA 737
P P G P P PP F PPP A
Sbjct: 245 PAGPGGPPPPPPPPPADFFANIAPPPVDA 273
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,130,460
Number of Sequences: 27780
Number of extensions: 310865
Number of successful extensions: 1767
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 531
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1303
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2370744068
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -