Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_B18
         (858 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC038515-1|AAH38515.1|  796|Homo sapiens CCDC110 protein protein.      31   4.1  
BC028419-1|AAH28419.1|  833|Homo sapiens coiled-coil domain cont...    31   4.1  
AB080722-1|BAC81776.1|  833|Homo sapiens hypothetical protein pr...    31   4.1  

>BC038515-1|AAH38515.1|  796|Homo sapiens CCDC110 protein protein.
          Length = 796

 Score = 31.5 bits (68), Expect = 4.1
 Identities = 22/99 (22%), Positives = 47/99 (47%)
 Frame = +1

Query: 184 MKLF*EIMDTSSIVSFNNDSTFQATLKGDYNHHSVHELALHAMRDRCLLLQRRINVLEND 363
           +K F +I+   +++   N +  +  ++       + E AL  ++ +    Q  + ++ N+
Sbjct: 468 LKEFKKIISKYNVLQGQNKTLEEKNIQLSLEKQQMME-ALDQLKSKEHKTQSDMAIVNNE 526

Query: 364 NMRLKLDATRNNENIAFHDDDKLDLLQKIAELNKQKSQL 480
           N R+ ++      NI    D+K  L +K  +L K+KS L
Sbjct: 527 NNRMSIEMEAMKTNILLIQDEKEMLEKKTHQLLKEKSSL 565


>BC028419-1|AAH28419.1|  833|Homo sapiens coiled-coil domain
           containing 110 protein.
          Length = 833

 Score = 31.5 bits (68), Expect = 4.1
 Identities = 22/99 (22%), Positives = 47/99 (47%)
 Frame = +1

Query: 184 MKLF*EIMDTSSIVSFNNDSTFQATLKGDYNHHSVHELALHAMRDRCLLLQRRINVLEND 363
           +K F +I+   +++   N +  +  ++       + E AL  ++ +    Q  + ++ N+
Sbjct: 505 LKEFKKIISKYNVLQGQNKTLEEKNIQLSLEKQQMME-ALDQLKSKEHKTQSDMAIVNNE 563

Query: 364 NMRLKLDATRNNENIAFHDDDKLDLLQKIAELNKQKSQL 480
           N R+ ++      NI    D+K  L +K  +L K+KS L
Sbjct: 564 NNRMSIEMEAMKTNILLIQDEKEMLEKKTHQLLKEKSSL 602


>AB080722-1|BAC81776.1|  833|Homo sapiens hypothetical protein
           protein.
          Length = 833

 Score = 31.5 bits (68), Expect = 4.1
 Identities = 22/99 (22%), Positives = 47/99 (47%)
 Frame = +1

Query: 184 MKLF*EIMDTSSIVSFNNDSTFQATLKGDYNHHSVHELALHAMRDRCLLLQRRINVLEND 363
           +K F +I+   +++   N +  +  ++       + E AL  ++ +    Q  + ++ N+
Sbjct: 505 LKEFKKIISKYNVLQGQNKTLEEKNIQLSLEKQQMME-ALDQLKSKEHKTQSDMAIVNNE 563

Query: 364 NMRLKLDATRNNENIAFHDDDKLDLLQKIAELNKQKSQL 480
           N R+ ++      NI    D+K  L +K  +L K+KS L
Sbjct: 564 NNRMSIEMEAMKTNILLIQDEKEMLEKKTHQLLKEKSSL 602


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,480,686
Number of Sequences: 237096
Number of extensions: 1647615
Number of successful extensions: 3109
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3003
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3105
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10928473528
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)