Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP10_F_B18
(858 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41107-11|AAC71161.1| 454|Caenorhabditis elegans Hypothetical p... 32 0.60
U41107-10|AAN39669.1| 416|Caenorhabditis elegans Hypothetical p... 32 0.60
U41107-9|AAK73877.1| 471|Caenorhabditis elegans Hypothetical pr... 32 0.60
U41107-8|AAN39670.1| 468|Caenorhabditis elegans Hypothetical pr... 32 0.60
AJ243182-1|CAB45863.1| 2857|Caenorhabditis elegans inositol 1,4,... 31 1.4
AJ243181-1|CAB45862.1| 2836|Caenorhabditis elegans inositol 1,4,... 31 1.4
AJ243180-1|CAB45861.1| 2892|Caenorhabditis elegans inositol 1,4,... 31 1.4
AJ243179-1|CAB45860.1| 2846|Caenorhabditis elegans inositol 1,4,... 31 1.4
AF168688-1|AAF05302.1| 2846|Caenorhabditis elegans inositol 1,4,... 31 1.4
AF036702-4|AAK68365.1| 2857|Caenorhabditis elegans Inositol trip... 31 1.4
AF036702-3|AAK68366.1| 2846|Caenorhabditis elegans Inositol trip... 31 1.4
AF036702-2|AAW30669.1| 2836|Caenorhabditis elegans Inositol trip... 31 1.4
AF036702-1|AAW30668.1| 2892|Caenorhabditis elegans Inositol trip... 31 1.4
AC024796-11|AAK29890.2| 828|Caenorhabditis elegans Hypothetical... 29 4.2
Z36752-2|CAA85324.1| 371|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z22181-1|CAA80179.1| 710|Caenorhabditis elegans Hypothetical pr... 28 9.8
AF003142-1|AAB54189.2| 389|Caenorhabditis elegans Hypothetical ... 28 9.8
>U41107-11|AAC71161.1| 454|Caenorhabditis elegans Hypothetical
protein F55C12.1a protein.
Length = 454
Score = 31.9 bits (69), Expect = 0.60
Identities = 18/56 (32%), Positives = 36/56 (64%), Gaps = 3/56 (5%)
Frame = +1
Query: 352 LENDNMRLKLDATRNNENIAFHDD--DKLDLLQ-KIAELNKQKSQLMHHVFMVSCE 510
LE + +R K+D R+ E+I+ +D +++++L+ K+AEL K+K ++ + S E
Sbjct: 217 LETEELRRKVDGPRS-ESISDREDMHEEIEILKAKVAELMKEKEEMTDQLLATSVE 271
>U41107-10|AAN39669.1| 416|Caenorhabditis elegans Hypothetical
protein F55C12.1c protein.
Length = 416
Score = 31.9 bits (69), Expect = 0.60
Identities = 18/56 (32%), Positives = 36/56 (64%), Gaps = 3/56 (5%)
Frame = +1
Query: 352 LENDNMRLKLDATRNNENIAFHDD--DKLDLLQ-KIAELNKQKSQLMHHVFMVSCE 510
LE + +R K+D R+ E+I+ +D +++++L+ K+AEL K+K ++ + S E
Sbjct: 179 LETEELRRKVDGPRS-ESISDREDMHEEIEILKAKVAELMKEKEEMTDQLLATSVE 233
>U41107-9|AAK73877.1| 471|Caenorhabditis elegans Hypothetical
protein F55C12.1b protein.
Length = 471
Score = 31.9 bits (69), Expect = 0.60
Identities = 18/56 (32%), Positives = 36/56 (64%), Gaps = 3/56 (5%)
Frame = +1
Query: 352 LENDNMRLKLDATRNNENIAFHDD--DKLDLLQ-KIAELNKQKSQLMHHVFMVSCE 510
LE + +R K+D R+ E+I+ +D +++++L+ K+AEL K+K ++ + S E
Sbjct: 234 LETEELRRKVDGPRS-ESISDREDMHEEIEILKAKVAELMKEKEEMTDQLLATSVE 288
>U41107-8|AAN39670.1| 468|Caenorhabditis elegans Hypothetical
protein F55C12.1d protein.
Length = 468
Score = 31.9 bits (69), Expect = 0.60
Identities = 18/56 (32%), Positives = 36/56 (64%), Gaps = 3/56 (5%)
Frame = +1
Query: 352 LENDNMRLKLDATRNNENIAFHDD--DKLDLLQ-KIAELNKQKSQLMHHVFMVSCE 510
LE + +R K+D R+ E+I+ +D +++++L+ K+AEL K+K ++ + S E
Sbjct: 231 LETEELRRKVDGPRS-ESISDREDMHEEIEILKAKVAELMKEKEEMTDQLLATSVE 285
>AJ243182-1|CAB45863.1| 2857|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2857
Score = 30.7 bits (66), Expect = 1.4
Identities = 18/36 (50%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
Frame = -1
Query: 297 QLVNTVVIVVAFKS--GLECRVVIKTYY*RSIHYFL 196
QLVN +V VVAF S GLE R + + R++HY L
Sbjct: 2501 QLVNKIVHVVAFVSNKGLEDRPIAEILACRNLHYLL 2536
>AJ243181-1|CAB45862.1| 2836|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2836
Score = 30.7 bits (66), Expect = 1.4
Identities = 18/36 (50%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
Frame = -1
Query: 297 QLVNTVVIVVAFKS--GLECRVVIKTYY*RSIHYFL 196
QLVN +V VVAF S GLE R + + R++HY L
Sbjct: 2480 QLVNKIVHVVAFVSNKGLEDRPIAEILACRNLHYLL 2515
>AJ243180-1|CAB45861.1| 2892|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2892
Score = 30.7 bits (66), Expect = 1.4
Identities = 18/36 (50%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
Frame = -1
Query: 297 QLVNTVVIVVAFKS--GLECRVVIKTYY*RSIHYFL 196
QLVN +V VVAF S GLE R + + R++HY L
Sbjct: 2536 QLVNKIVHVVAFVSNKGLEDRPIAEILACRNLHYLL 2571
>AJ243179-1|CAB45860.1| 2846|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2846
Score = 30.7 bits (66), Expect = 1.4
Identities = 18/36 (50%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
Frame = -1
Query: 297 QLVNTVVIVVAFKS--GLECRVVIKTYY*RSIHYFL 196
QLVN +V VVAF S GLE R + + R++HY L
Sbjct: 2490 QLVNKIVHVVAFVSNKGLEDRPIAEILACRNLHYLL 2525
>AF168688-1|AAF05302.1| 2846|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2846
Score = 30.7 bits (66), Expect = 1.4
Identities = 18/36 (50%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
Frame = -1
Query: 297 QLVNTVVIVVAFKS--GLECRVVIKTYY*RSIHYFL 196
QLVN +V VVAF S GLE R + + R++HY L
Sbjct: 2490 QLVNKIVHVVAFVSNKGLEDRPIAEILACRNLHYLL 2525
>AF036702-4|AAK68365.1| 2857|Caenorhabditis elegans Inositol
triphosphate receptorprotein 1, isoform e protein.
Length = 2857
Score = 30.7 bits (66), Expect = 1.4
Identities = 18/36 (50%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
Frame = -1
Query: 297 QLVNTVVIVVAFKS--GLECRVVIKTYY*RSIHYFL 196
QLVN +V VVAF S GLE R + + R++HY L
Sbjct: 2501 QLVNKIVHVVAFVSNKGLEDRPIAEILACRNLHYLL 2536
>AF036702-3|AAK68366.1| 2846|Caenorhabditis elegans Inositol
triphosphate receptorprotein 1, isoform f protein.
Length = 2846
Score = 30.7 bits (66), Expect = 1.4
Identities = 18/36 (50%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
Frame = -1
Query: 297 QLVNTVVIVVAFKS--GLECRVVIKTYY*RSIHYFL 196
QLVN +V VVAF S GLE R + + R++HY L
Sbjct: 2490 QLVNKIVHVVAFVSNKGLEDRPIAEILACRNLHYLL 2525
>AF036702-2|AAW30669.1| 2836|Caenorhabditis elegans Inositol
triphosphate receptorprotein 1, isoform d protein.
Length = 2836
Score = 30.7 bits (66), Expect = 1.4
Identities = 18/36 (50%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
Frame = -1
Query: 297 QLVNTVVIVVAFKS--GLECRVVIKTYY*RSIHYFL 196
QLVN +V VVAF S GLE R + + R++HY L
Sbjct: 2480 QLVNKIVHVVAFVSNKGLEDRPIAEILACRNLHYLL 2515
>AF036702-1|AAW30668.1| 2892|Caenorhabditis elegans Inositol
triphosphate receptorprotein 1, isoform a protein.
Length = 2892
Score = 30.7 bits (66), Expect = 1.4
Identities = 18/36 (50%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
Frame = -1
Query: 297 QLVNTVVIVVAFKS--GLECRVVIKTYY*RSIHYFL 196
QLVN +V VVAF S GLE R + + R++HY L
Sbjct: 2536 QLVNKIVHVVAFVSNKGLEDRPIAEILACRNLHYLL 2571
>AC024796-11|AAK29890.2| 828|Caenorhabditis elegans Hypothetical
protein Y48G1C.8 protein.
Length = 828
Score = 29.1 bits (62), Expect = 4.2
Identities = 22/94 (23%), Positives = 43/94 (45%), Gaps = 1/94 (1%)
Frame = +1
Query: 220 IVSFNNDSTFQATLKGDYNHHSVHELALHAMRDRCLLLQRRINVLENDNMRLKLDATRNN 399
++ +NDS Q L+ D + H+L M+D + + ++L++D + + + NN
Sbjct: 610 VIGHHNDSLDQIQLQHDQHQQQQHQL----MQDVSIAQDAQGHLLDDDLLDMSQEDVLNN 665
Query: 400 ENIAFHDDDKLDLLQKIAELNKQKSQL-MHHVFM 498
DDD L + A + QL H+++
Sbjct: 666 GYDLEFDDDPLTQQENPAPYFENPRQLETGHIYL 699
>Z36752-2|CAA85324.1| 371|Caenorhabditis elegans Hypothetical
protein F35H8.2 protein.
Length = 371
Score = 28.3 bits (60), Expect = 7.4
Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = -3
Query: 370 ACCHSPKHLFCVVV-IDNDPSWHEEPTREHCGDC 272
A HSP H FC V+ I+++P + E R GDC
Sbjct: 121 AMMHSPIHFFCFVLDINSEPLFKERMFR--LGDC 152
>Z22181-1|CAA80179.1| 710|Caenorhabditis elegans Hypothetical
protein ZK632.2 protein.
Length = 710
Score = 27.9 bits (59), Expect = 9.8
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = +1
Query: 316 DRCLLLQRRINVLENDNMRLKLDATRNNENIAFHDDDKLDLLQKIAELNKQKSQ 477
D C +L NVL N +L++ N + +DD L L + +L KQ+ +
Sbjct: 343 DACRILDT-YNVLRKSNTKLRMQRKTLEANDYYDEDDDL-YLDRTGQLEKQREK 394
>AF003142-1|AAB54189.2| 389|Caenorhabditis elegans Hypothetical
protein F57C9.6 protein.
Length = 389
Score = 27.9 bits (59), Expect = 9.8
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = -3
Query: 454 QLFSGVGQVCHHHEKQYFHYFL*HQVLSACC 362
++ SG H E HYF+ H +L A C
Sbjct: 203 EMMSGASFCIKHQETSLSHYFVFHMILIAFC 233
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,564,502
Number of Sequences: 27780
Number of extensions: 291919
Number of successful extensions: 721
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 679
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 712
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2139963672
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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