Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_B13
         (829 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_07_0340 + 29389314-29389627,29389966-29390112,29390654-293907...    28   7.9  

>05_07_0340 +
           29389314-29389627,29389966-29390112,29390654-29390789,
           29391098-29391199,29391801-29391920,29392033-29392113,
           29392578-29392918,29393069-29393314,29394195-29394519,
           29395123-29395356,29395437-29395691
          Length = 766

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
 Frame = -1

Query: 541 SQFIFHFI--YQT*SWTSIFMFRIQNIMTTLNARSLLQEHR 425
           ++F+ H +  Y    WT   +FR   I+TT+  R L  E R
Sbjct: 153 NRFVTHLVMAYAVTFWTCYVLFREYEIITTMRLRFLASEKR 193


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,760,788
Number of Sequences: 37544
Number of extensions: 288927
Number of successful extensions: 487
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 481
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 487
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2279943096
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)