Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP10_F_B10
(861 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_04_0740 + 19850745-19851254 32 0.68
01_06_0160 - 27095727-27096008,27096164-27096652,27096983-270971... 31 0.89
04_04_1404 + 33302080-33303341,33303435-33305307 31 1.2
07_01_0565 + 4188387-4190570 31 1.6
11_02_0086 + 8186355-8186667,8186773-8187335 30 2.1
02_02_0267 - 8416184-8416684 30 2.1
09_06_0263 - 21923991-21924614,21924722-21925438 29 3.6
08_02_1168 + 24853895-24854216,24854264-24854286,24856102-248561... 29 3.6
07_01_0975 + 8223269-8224354 29 3.6
06_01_0711 + 5154232-5154942,5155597-5156010 29 4.8
04_04_0206 + 23595268-23595279,23595475-23596317,23597037-235970... 29 4.8
02_05_0447 + 29096853-29097033,29097812-29098146,29098651-290987... 29 4.8
12_02_1284 + 27548813-27549826 29 6.3
09_06_0374 + 22649455-22650024,22650085-22650637,22650812-226511... 29 6.3
08_01_0829 - 8051073-8051357,8051503-8051934 29 6.3
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095... 28 8.3
09_06_0081 + 20745627-20748144,20748211-20748308 28 8.3
07_01_0702 + 5288588-5288889,5289257-5289407,5289543-5289725,529... 28 8.3
>09_04_0740 + 19850745-19851254
Length = 169
Score = 31.9 bits (69), Expect = 0.68
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = -2
Query: 203 ARPVQRPSDVAGRRSAVASGPTRPQPHVGAGRVASPGXTGTS 78
A V RP+ G +A + RP P GAG SP +G S
Sbjct: 128 AAAVPRPATFPGLAAAATAAVPRPPPFTGAGAAPSPPKSGGS 169
>01_06_0160 -
27095727-27096008,27096164-27096652,27096983-27097132,
27097656-27097920,27097995-27098274,27100311-27100388,
27100597-27101240,27101334-27101412,27101489-27101612,
27101782-27101882,27102870-27103068
Length = 896
Score = 31.5 bits (68), Expect = 0.89
Identities = 19/73 (26%), Positives = 32/73 (43%)
Frame = -2
Query: 230 ESSRRVTSVARPVQRPSDVAGRRSAVASGPTRPQPHVGAGRVASPGXTGTSPAALPRVPK 51
+S V S +R + +D +GR S+V SG + + PG T+ VP
Sbjct: 109 KSRGAVNSNSRATRAGADRSGRSSSVQSGSSGADNMSSRSSILGPGVLATNSTQKQTVPS 168
Query: 50 SYRNSSIVXIGNW 12
S N ++ G++
Sbjct: 169 STVNKDVLHDGSF 181
>04_04_1404 + 33302080-33303341,33303435-33305307
Length = 1044
Score = 31.1 bits (67), Expect = 1.2
Identities = 19/58 (32%), Positives = 25/58 (43%)
Frame = -2
Query: 236 GRESSRRVTSVARPVQRPSDVAGRRSAVASGPTRPQPHVGAGRVASPGXTGTSPAALP 63
GR S RV RP+D G+R + P P GA R +S G +P + P
Sbjct: 330 GRASGPRVGGSGS--SRPADAQGKRKLGGTPPPSPPRGGGAARASSRRPEGAAPTSQP 385
>07_01_0565 + 4188387-4190570
Length = 727
Score = 30.7 bits (66), Expect = 1.6
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Frame = -2
Query: 197 PVQRPS-DVAGRRSAVASGPTRPQPH--VGAGRVASPGXTGTSPAALPRVPKSYRNSSIV 27
P + P+ + RR+ V G RP PH G V S T+ ++ PR P S +S+
Sbjct: 6 PERAPAAEARRRRTTVYHGHRRPSPHRPTVRGGVFSDLRATTAASSQPRPPSSSSSSAPF 65
Query: 26 XIGNW 12
+ +W
Sbjct: 66 RLADW 70
>11_02_0086 + 8186355-8186667,8186773-8187335
Length = 291
Score = 30.3 bits (65), Expect = 2.1
Identities = 23/83 (27%), Positives = 34/83 (40%), Gaps = 5/83 (6%)
Frame = -2
Query: 260 HYGYARLSGRESSRRVTSVARPVQRPSDVAGRRSAVASGPTRPQPHVGA-----GRVASP 96
H L ++ R+ + RP VA R + + P RP+P V + VASP
Sbjct: 195 HKNDIELGSTDAIDRLPRIPVSPSRPPVVASPRDSSIASPPRPEPPVASPPGPEPPVASP 254
Query: 95 GXTGTSPAALPRVPKSYRNSSIV 27
P A PR+ K S++
Sbjct: 255 -PRPEPPVASPRIEKDAEEQSVL 276
>02_02_0267 - 8416184-8416684
Length = 166
Score = 30.3 bits (65), Expect = 2.1
Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Frame = -2
Query: 227 SSRRVTSVARPVQRPSDVAGRRSAVASGPTRPQPHVGAGRVASPGXTGTSPAALPRVPK- 51
SS V +VA +R + G ++ ++ P+ A A G G +P+AL +PK
Sbjct: 35 SSIIVFTVAVCFRRAVTLQGYAASASASPSGRGGGAAAAPAAVGGLRGLAPSALAAIPKF 94
Query: 50 SYRNSSIVXIGNW 12
+YR + G W
Sbjct: 95 AYRRGAAGGGGGW 107
>09_06_0263 - 21923991-21924614,21924722-21925438
Length = 446
Score = 29.5 bits (63), Expect = 3.6
Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
Frame = -2
Query: 203 ARPVQ--RPSDVAGRRSAVASGPTRPQPHVGAGRVASPGXTGTSPA 72
A P+Q + +A RR A S T P PH G++ PG PA
Sbjct: 44 AAPIQDKQTRQIARRRRASGS-ETAPPPHRSIGKIGMPGGHNKQPA 88
>08_02_1168 +
24853895-24854216,24854264-24854286,24856102-24856181,
24856286-24856369,24856843-24857074
Length = 246
Score = 29.5 bits (63), Expect = 3.6
Identities = 25/74 (33%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
Frame = -2
Query: 281 RVQNKVPHYGYARLSGRESSRRVTSVARPVQRPSDVAGRRSAVASGPTRPQPHVGA-GRV 105
R+ PH + SGR R+ R +RP G S+ A+G RP P + A GR
Sbjct: 24 RIPLSSPHLPFLPRSGRGEGRQRRCGRREARRPP--PGAASSAAAG--RPDPSLAAVGRP 79
Query: 104 -ASPGXTGTSPAAL 66
SP G + A L
Sbjct: 80 DPSPATAGKTAAGL 93
>07_01_0975 + 8223269-8224354
Length = 361
Score = 29.5 bits (63), Expect = 3.6
Identities = 23/68 (33%), Positives = 29/68 (42%)
Frame = -2
Query: 236 GRESSRRVTSVARPVQRPSDVAGRRSAVASGPTRPQPHVGAGRVASPGXTGTSPAALPRV 57
G ESS + A P + SDV + AS P P P G S G +SP++ P
Sbjct: 197 GYESSSAAAAPA-PSESDSDVGSGSGSAASAPG-PSPSDDTGYGGSSGSPSSSPSSSPSS 254
Query: 56 PKSYRNSS 33
S SS
Sbjct: 255 SPSGSPSS 262
>06_01_0711 + 5154232-5154942,5155597-5156010
Length = 374
Score = 29.1 bits (62), Expect = 4.8
Identities = 16/55 (29%), Positives = 22/55 (40%)
Frame = -2
Query: 176 VAGRRSAVASGPTRPQPHVGAGRVASPGXTGTSPAALPRVPKSYRNSSIVXIGNW 12
V G ++ G P H GAG A+P T T P + S +V + W
Sbjct: 118 VVGACASRVRGVLLPNAHGGAGAGATPAATATERGIKPTLSVSLAAICLVLVAPW 172
>04_04_0206 +
23595268-23595279,23595475-23596317,23597037-23597088,
23597328-23597395,23597482-23597585,23597681-23597768,
23598405-23598722
Length = 494
Score = 29.1 bits (62), Expect = 4.8
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = -2
Query: 239 SGRESSRRVTSVARPVQRPSDVAGRRSAVASGPTRP 132
SGR S R+ V Q+P++ A RR+AV P P
Sbjct: 222 SGRGPSERINMVNNITQKPANQATRRNAVKIEPQVP 257
>02_05_0447 +
29096853-29097033,29097812-29098146,29098651-29098782,
29098870-29099142,29099295-29099477
Length = 367
Score = 29.1 bits (62), Expect = 4.8
Identities = 19/68 (27%), Positives = 32/68 (47%)
Frame = -2
Query: 248 ARLSGRESSRRVTSVARPVQRPSDVAGRRSAVASGPTRPQPHVGAGRVASPGXTGTSPAA 69
A +SG +S ++S P RP R S A+ P + V A V+SP + ++
Sbjct: 3 AAISG--ASLVLSSPPAPGARPQPRPARVSVAAAAPAARRGVVAAAAVSSPAVSSSAGKD 60
Query: 68 LPRVPKSY 45
++PK +
Sbjct: 61 AKQIPKDF 68
>12_02_1284 + 27548813-27549826
Length = 337
Score = 28.7 bits (61), Expect = 6.3
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = -2
Query: 254 GYARLSGRES-SRRVTSVARPVQRPSDVAGRRSAVASGPTRPQ 129
G RL R S SRR + + P QRP +A R + ++G T+ Q
Sbjct: 13 GLHRLISRSSCSRRTFAASTPPQRPRAIAVRVRSSSAGVTKSQ 55
>09_06_0374 +
22649455-22650024,22650085-22650637,22650812-22651147,
22651171-22652605,22652939-22653062
Length = 1005
Score = 28.7 bits (61), Expect = 6.3
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = -2
Query: 188 RPSDVAGRRSAVASGPTRPQPHVGAGRVASPGXTGTSPAALP 63
RP+D G+R + P P GA R ++ G +P + P
Sbjct: 324 RPADARGKRKQGGTPPPSPPRGGGAARASNRRPEGAAPTSQP 365
>08_01_0829 - 8051073-8051357,8051503-8051934
Length = 238
Score = 28.7 bits (61), Expect = 6.3
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +1
Query: 79 LVPVXPGDATRPAPTCGWGRVGPDATAERRPATS 180
L+PV P +A P P G GP ++ +P TS
Sbjct: 130 LLPVVPYNAFNPPPPAGQASGGPKIRSDAQPNTS 163
>10_08_0940 -
21708557-21708733,21709058-21709142,21709330-21709551,
21710640-21710815,21711883-21711946,21712433-21712507,
21715114-21715199,21715297-21716715
Length = 767
Score = 28.3 bits (60), Expect = 8.3
Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
Frame = +2
Query: 623 NESAN---ARGEAVCVLGALPLPRSLTRCAR 706
+ESAN AR EAV +G +P+ L RC+R
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464
>09_06_0081 + 20745627-20748144,20748211-20748308
Length = 871
Score = 28.3 bits (60), Expect = 8.3
Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = -2
Query: 203 ARPVQR-PSDVAGRRSAVASGPTRPQPHVGAGRVASPGXTGTSPAALPRVPKS 48
A PV PS + + P P + A VA+P + +SP+ +PR+P +
Sbjct: 518 APPVSTLPSPAPSVHTPPVTAPPATAPPMIAPPVATPPDSASSPSTVPRMPSA 570
>07_01_0702 +
5288588-5288889,5289257-5289407,5289543-5289725,
5290063-5290137,5290248-5290403,5290502-5290597,
5290855-5290985,5291057-5291138,5291237-5291586,
5293029-5293234,5293254-5293570
Length = 682
Score = 28.3 bits (60), Expect = 8.3
Identities = 21/65 (32%), Positives = 27/65 (41%), Gaps = 7/65 (10%)
Frame = -2
Query: 257 YGYARLS-GRESSRRVTSVARPVQRPSDVAGRRSAVASGPT------RPQPHVGAGRVAS 99
Y A++S R S + V A Q P A RR ++ GP R +P AGR
Sbjct: 501 YAAAQISTSRSSQQTVGQQATNWQNPRTAASRRGSIEPGPAPKPAARRGKPRRSAGRTLH 560
Query: 98 PGXTG 84
P G
Sbjct: 561 PQSKG 565
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,509,571
Number of Sequences: 37544
Number of extensions: 351822
Number of successful extensions: 1359
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1294
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1357
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2409218220
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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