Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_B10
         (861 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D88153-1|BAA21667.1|  340|Homo sapiens HYA22 protein.                  34   0.76 
X86096-1|CAA60050.2|  413|Homo sapiens transcription factor prot...    31   4.1  
U15641-1|AAC50119.1|  413|Homo sapiens E2F-4 protein.                  31   4.1  
S75174-1|AAB32597.1|  416|Homo sapiens E2F-4 protein.                  31   4.1  
BC033180-1|AAH33180.1|  413|Homo sapiens E2F transcription facto...    31   4.1  
AF527540-1|AAM77918.1|  413|Homo sapiens E2F transcription facto...    31   4.1  
AF250378-1|AAF65226.1|  413|Homo sapiens E2F transcription facto...    31   4.1  
X90568-1|CAA62188.1|26926|Homo sapiens titin protein.                  31   7.1  
X69490-1|CAA49245.1| 4650|Homo sapiens titin protein.                  31   7.1  
X64697-1|CAA45938.1| 3100|Homo sapiens titin protein.                  31   7.1  
AJ277892-2|CAD12456.1|30017|Homo sapiens Titin protein.                31   7.1  
AJ277892-1|CAD12455.1|26926|Homo sapiens N2B-Titin Isoform protein.    31   7.1  

>D88153-1|BAA21667.1|  340|Homo sapiens HYA22 protein.
          Length = 340

 Score = 33.9 bits (74), Expect = 0.76
 Identities = 22/52 (42%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
 Frame = -2

Query: 200 RPVQRPSDVAGRRSAVASGPTRPQPHVGAGRVASPG-XTGTSPAALPRVPKS 48
           RP++ PS   G R  +  GP  P P  GAGR A PG      PA  PR P++
Sbjct: 6   RPLE-PS--GGGRRELGRGPGPPLPERGAGRRARPGSGCERPPAPRPRAPRA 54


>X86096-1|CAA60050.2|  413|Homo sapiens transcription factor
           protein.
          Length = 413

 Score = 31.5 bits (68), Expect = 4.1
 Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
 Frame = -2

Query: 206 VARPVQRPSDVAGRRSAVASGPTRPQPHVGAGRVAS-PGXTGTSPAALP 63
           VA PV  P D+    SAV++ P  P+P +   + AS P     +P A+P
Sbjct: 205 VAVPVPPPEDLLQSPSAVSTPPPLPKPALAQSQEASRPNSPQLTPTAVP 253


>U15641-1|AAC50119.1|  413|Homo sapiens E2F-4 protein.
          Length = 413

 Score = 31.5 bits (68), Expect = 4.1
 Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
 Frame = -2

Query: 206 VARPVQRPSDVAGRRSAVASGPTRPQPHVGAGRVAS-PGXTGTSPAALP 63
           VA PV  P D+    SAV++ P  P+P +   + AS P     +P A+P
Sbjct: 205 VAVPVPPPEDLLQSPSAVSTPPPLPKPALAQSQEASRPNSPQLTPTAVP 253


>S75174-1|AAB32597.1|  416|Homo sapiens E2F-4 protein.
          Length = 416

 Score = 31.5 bits (68), Expect = 4.1
 Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
 Frame = -2

Query: 206 VARPVQRPSDVAGRRSAVASGPTRPQPHVGAGRVAS-PGXTGTSPAALP 63
           VA PV  P D+    SAV++ P  P+P +   + AS P     +P A+P
Sbjct: 205 VAVPVPPPEDLLQSPSAVSTPPPLPKPALAQSQEASRPNSPQLTPTAVP 253


>BC033180-1|AAH33180.1|  413|Homo sapiens E2F transcription factor
           4, p107/p130-binding protein.
          Length = 413

 Score = 31.5 bits (68), Expect = 4.1
 Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
 Frame = -2

Query: 206 VARPVQRPSDVAGRRSAVASGPTRPQPHVGAGRVAS-PGXTGTSPAALP 63
           VA PV  P D+    SAV++ P  P+P +   + AS P     +P A+P
Sbjct: 205 VAVPVPPPEDLLQSPSAVSTPPPLPKPALAQSQEASRPNSPQLTPTAVP 253


>AF527540-1|AAM77918.1|  413|Homo sapiens E2F transcription factor
           4, p107/p130-binding protein.
          Length = 413

 Score = 31.5 bits (68), Expect = 4.1
 Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
 Frame = -2

Query: 206 VARPVQRPSDVAGRRSAVASGPTRPQPHVGAGRVAS-PGXTGTSPAALP 63
           VA PV  P D+    SAV++ P  P+P +   + AS P     +P A+P
Sbjct: 205 VAVPVPPPEDLLQSPSAVSTPPPLPKPALAQSQEASRPNSPQLTPTAVP 253


>AF250378-1|AAF65226.1|  413|Homo sapiens E2F transcription factor 4
           protein.
          Length = 413

 Score = 31.5 bits (68), Expect = 4.1
 Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
 Frame = -2

Query: 206 VARPVQRPSDVAGRRSAVASGPTRPQPHVGAGRVAS-PGXTGTSPAALP 63
           VA PV  P D+    SAV++ P  P+P +   + AS P     +P A+P
Sbjct: 205 VAVPVPPPEDLLQSPSAVSTPPPLPKPALAQSQEASRPNSPQLTPTAVP 253


>X90568-1|CAA62188.1|26926|Homo sapiens titin protein.
          Length = 26926

 Score = 30.7 bits (66), Expect = 7.1
 Identities = 25/71 (35%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
 Frame = -2

Query: 308   VNSSFTT*SRVQNKVPHYG-YARLSGRESSRRVTSVARPVQRPSDVAGRRSAVASGPTRP 132
             VNSS     R Q KV H   Y   S R SS     V++P++    +A       S PTRP
Sbjct: 22294 VNSSV---KRTQIKVTHLTKYMEYSFRVSSENRFGVSKPLESAPIIAEHPFVPPSAPTRP 22350

Query: 131   QP-HVGAGRVA 102
             +  HV A  ++
Sbjct: 22351 EVYHVSANAMS 22361


>X69490-1|CAA49245.1| 4650|Homo sapiens titin protein.
          Length = 4650

 Score = 30.7 bits (66), Expect = 7.1
 Identities = 25/71 (35%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
 Frame = -2

Query: 308 VNSSFTT*SRVQNKVPHYG-YARLSGRESSRRVTSVARPVQRPSDVAGRRSAVASGPTRP 132
           VNSS     R Q KV H   Y   S R SS     V++P++    +A       S PTRP
Sbjct: 18  VNSSV---KRTQIKVTHLTKYMEYSFRVSSENRFGVSKPLESAPIIAEHPFVPPSAPTRP 74

Query: 131 QP-HVGAGRVA 102
           +  HV A  ++
Sbjct: 75  EVYHVSANAMS 85


>X64697-1|CAA45938.1| 3100|Homo sapiens titin protein.
          Length = 3100

 Score = 30.7 bits (66), Expect = 7.1
 Identities = 25/71 (35%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
 Frame = -2

Query: 308 VNSSFTT*SRVQNKVPHYG-YARLSGRESSRRVTSVARPVQRPSDVAGRRSAVASGPTRP 132
           VNSS     R Q KV H   Y   S R SS     V++P++    +A       S PTRP
Sbjct: 18  VNSSV---KRTQIKVTHLTKYMEYSFRVSSENRFGVSKPLESAPIIAEHPFVPPSAPTRP 74

Query: 131 QP-HVGAGRVA 102
           +  HV A  ++
Sbjct: 75  EVYHVSANAMS 85


>AJ277892-2|CAD12456.1|30017|Homo sapiens Titin protein.
          Length = 30000

 Score = 30.7 bits (66), Expect = 7.1
 Identities = 25/71 (35%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
 Frame = -2

Query: 308   VNSSFTT*SRVQNKVPHYG-YARLSGRESSRRVTSVARPVQRPSDVAGRRSAVASGPTRP 132
             VNSS     R Q KV H   Y   S R SS     V++P++    +A       S PTRP
Sbjct: 29718 VNSSV---KRTQIKVTHLTKYMEYSFRVSSENRFGVSKPLESAPIIAEHPFVPPSAPTRP 29774

Query: 131   QP-HVGAGRVA 102
             +  HV A  ++
Sbjct: 29775 EVYHVSANAMS 29785


>AJ277892-1|CAD12455.1|26926|Homo sapiens N2B-Titin Isoform protein.
          Length = 26926

 Score = 30.7 bits (66), Expect = 7.1
 Identities = 25/71 (35%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
 Frame = -2

Query: 308   VNSSFTT*SRVQNKVPHYG-YARLSGRESSRRVTSVARPVQRPSDVAGRRSAVASGPTRP 132
             VNSS     R Q KV H   Y   S R SS     V++P++    +A       S PTRP
Sbjct: 22294 VNSSV---KRTQIKVTHLTKYMEYSFRVSSENRFGVSKPLESAPIIAEHPFVPPSAPTRP 22350

Query: 131   QP-HVGAGRVA 102
             +  HV A  ++
Sbjct: 22351 EVYHVSANAMS 22361


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,887,328
Number of Sequences: 237096
Number of extensions: 1961055
Number of successful extensions: 11525
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 8021
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11517
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10984231046
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)