Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_B10
         (861 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF427497-1|AAL25121.1|  939|Drosophila melanogaster coiled-coil ...    32   1.2  
U31961-5|AAA84404.1|  424|Drosophila melanogaster protein ( Dros...    29   8.2  
AY166585-1|AAN86032.1|  990|Drosophila melanogaster HAMLET protein.    29   8.2  
AE014297-2268|AAF55361.3|  417|Drosophila melanogaster CG10349-P...    29   8.2  
AE014134-2973|AAF53703.3| 1108|Drosophila melanogaster CG31753-P...    29   8.2  

>AF427497-1|AAL25121.1|  939|Drosophila melanogaster coiled-coil Y
           protein protein.
          Length = 939

 Score = 31.9 bits (69), Expect = 1.2
 Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 8/65 (12%)
 Frame = -2

Query: 203 ARPVQRPSDVAGRRSAVASGPTRPQPHVGAGRVASPG------XTGTSPAALP--RVPKS 48
           A+P++ P   AG   A + G   P+   G+ + ASPG        G++ AA P   VPKS
Sbjct: 541 AKPLEVPKSGAGSAQAASPGLEVPKSGAGSAQAASPGLEVPKSGAGSAQAATPGLEVPKS 600

Query: 47  YRNSS 33
              S+
Sbjct: 601 GAGSA 605


>U31961-5|AAA84404.1|  424|Drosophila melanogaster protein (
           Drosophila melanogasterbithorax complex (BX-C), complete
           sequence. ).
          Length = 424

 Score = 29.1 bits (62), Expect = 8.2
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = +2

Query: 626 ESANARGEAVCVLGALPLPRSLTRCARSFGCG 721
           ES      +VC  G LP+P  L  C +  GCG
Sbjct: 340 ESYQTTSASVCHSGWLPVPGHLAGCGQRRGCG 371


>AY166585-1|AAN86032.1|  990|Drosophila melanogaster HAMLET protein.
          Length = 990

 Score = 29.1 bits (62), Expect = 8.2
 Identities = 16/39 (41%), Positives = 19/39 (48%)
 Frame = -2

Query: 239 SGRESSRRVTSVARPVQRPSDVAGRRSAVASGPTRPQPH 123
           +G E S      A P    +  A   SA+ASGPT PQ H
Sbjct: 715 AGGELSSTSEGGAVPTMAAAAFAADHSALASGPTLPQTH 753


>AE014297-2268|AAF55361.3|  417|Drosophila melanogaster CG10349-PA
           protein.
          Length = 417

 Score = 29.1 bits (62), Expect = 8.2
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = +2

Query: 626 ESANARGEAVCVLGALPLPRSLTRCARSFGCG 721
           ES      +VC  G LP+P  L  C +  GCG
Sbjct: 333 ESYQTTSASVCHSGWLPVPGHLAGCGQRRGCG 364


>AE014134-2973|AAF53703.3| 1108|Drosophila melanogaster CG31753-PA
           protein.
          Length = 1108

 Score = 29.1 bits (62), Expect = 8.2
 Identities = 16/39 (41%), Positives = 19/39 (48%)
 Frame = -2

Query: 239 SGRESSRRVTSVARPVQRPSDVAGRRSAVASGPTRPQPH 123
           +G E S      A P    +  A   SA+ASGPT PQ H
Sbjct: 833 AGGELSSTSEGGAVPTMAAAAFAADHSALASGPTLPQTH 871


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,936,735
Number of Sequences: 53049
Number of extensions: 573034
Number of successful extensions: 1766
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1661
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1766
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4147514904
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)