Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_B08
         (913 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118933-1|AAM50793.1|  269|Drosophila melanogaster LD24347p pro...   174   2e-43
AE014298-421|AAF45796.1|  269|Drosophila melanogaster CG8636-PA ...   174   2e-43
AE014297-2789|AAF55764.1|  273|Drosophila melanogaster CG10881-P...   146   4e-35
AY069468-1|AAL39613.1|  537|Drosophila melanogaster LD20892p pro...    30   3.8  
AF422803-1|AAL56570.1|  537|Drosophila melanogaster MyD88 adapte...    30   3.8  
AE013599-847|AAF58953.1|  537|Drosophila melanogaster CG2078-PA ...    30   3.8  

>AY118933-1|AAM50793.1|  269|Drosophila melanogaster LD24347p
           protein.
          Length = 269

 Score =  174 bits (423), Expect = 2e-43
 Identities = 81/145 (55%), Positives = 106/145 (73%)
 Frame = +2

Query: 209 MPVAEEFQASWADEVEIDQGVLPPPSEVVENGLKIVTEYKYDNDNKKVKIVRTYKIEKRV 388
           MP  E  ++SWADEVE+D G LPP +E VENG K VTEYKY+ D+KK K+VRTYKI K+V
Sbjct: 1   MPGVETIKSSWADEVELDYGGLPPTTETVENGQKYVTEYKYNKDDKKTKVVRTYKISKQV 60

Query: 389 VSKSIAKRKTWSKFGDSASDKPGPNPATTNVAEDVFMQFITSKEESQRPDDGELDGLKPP 568
           V K++AKR+TW+KFGDS +DKPGPN  TT V+E++ MQF+ SKE+ ++ +D  LD  K  
Sbjct: 61  VPKTVAKRRTWTKFGDSKNDKPGPNSQTTMVSEEIIMQFLNSKED-EKANDPLLDPTKN- 118

Query: 569 SSXVIFKCRTCQGDHXTLYCPFXHT 643
               I KCR C G+H ++ CP+  T
Sbjct: 119 ----IAKCRICNGEHWSVNCPYKGT 139


>AE014298-421|AAF45796.1|  269|Drosophila melanogaster CG8636-PA
           protein.
          Length = 269

 Score =  174 bits (423), Expect = 2e-43
 Identities = 81/145 (55%), Positives = 106/145 (73%)
 Frame = +2

Query: 209 MPVAEEFQASWADEVEIDQGVLPPPSEVVENGLKIVTEYKYDNDNKKVKIVRTYKIEKRV 388
           MP  E  ++SWADEVE+D G LPP +E VENG K VTEYKY+ D+KK K+VRTYKI K+V
Sbjct: 1   MPGVETIKSSWADEVELDYGGLPPTTETVENGQKYVTEYKYNKDDKKTKVVRTYKISKQV 60

Query: 389 VSKSIAKRKTWSKFGDSASDKPGPNPATTNVAEDVFMQFITSKEESQRPDDGELDGLKPP 568
           V K++AKR+TW+KFGDS +DKPGPN  TT V+E++ MQF+ SKE+ ++ +D  LD  K  
Sbjct: 61  VPKTVAKRRTWTKFGDSKNDKPGPNSQTTMVSEEIIMQFLNSKED-EKANDPLLDPTKN- 118

Query: 569 SSXVIFKCRTCQGDHXTLYCPFXHT 643
               I KCR C G+H ++ CP+  T
Sbjct: 119 ----IAKCRICNGEHWSVNCPYKGT 139


>AE014297-2789|AAF55764.1|  273|Drosophila melanogaster CG10881-PA
           protein.
          Length = 273

 Score =  146 bits (354), Expect = 4e-35
 Identities = 71/140 (50%), Positives = 96/140 (68%), Gaps = 1/140 (0%)
 Frame = +2

Query: 227 FQASWADEVEIDQ-GVLPPPSEVVENGLKIVTEYKYDNDNKKVKIVRTYKIEKRVVSKSI 403
           F  SWADEV+ D    LPP +E ++   K VTEYK+++D KKVK+VRT+KIEK++V K++
Sbjct: 4   FVTSWADEVDADYVDGLPPSNEYIKGDFKYVTEYKFNDDGKKVKVVRTFKIEKQIVPKAV 63

Query: 404 AKRKTWSKFGDSASDKPGPNPATTNVAEDVFMQFITSKEESQRPDDGELDGLKPPSSXVI 583
           A+R+ W KFGDS SDKPGPN  TT  +E++FMQFI SK+  Q   + +LD  K      I
Sbjct: 64  ARRRNWVKFGDSRSDKPGPNSQTTMASEEIFMQFIGSKDFDQ-THETQLDPGKN-----I 117

Query: 584 FKCRTCQGDHXTLYCPFXHT 643
            KCR C G+H ++ CP+  T
Sbjct: 118 AKCRICNGEHWSVNCPYKGT 137


>AY069468-1|AAL39613.1|  537|Drosophila melanogaster LD20892p
           protein.
          Length = 537

 Score = 30.3 bits (65), Expect = 3.8
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = +2

Query: 92  FICIQQNEVEHSDQTYHINYHSHT 163
           F+C QQ+ V HS    H ++H HT
Sbjct: 5   FVCHQQHSVAHSHYQPHSHFHHHT 28


>AF422803-1|AAL56570.1|  537|Drosophila melanogaster MyD88 adapter
           protein protein.
          Length = 537

 Score = 30.3 bits (65), Expect = 3.8
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = +2

Query: 92  FICIQQNEVEHSDQTYHINYHSHT 163
           F+C QQ+ V HS    H ++H HT
Sbjct: 5   FVCHQQHSVAHSHYQPHSHFHHHT 28


>AE013599-847|AAF58953.1|  537|Drosophila melanogaster CG2078-PA
           protein.
          Length = 537

 Score = 30.3 bits (65), Expect = 3.8
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = +2

Query: 92  FICIQQNEVEHSDQTYHINYHSHT 163
           F+C QQ+ V HS    H ++H HT
Sbjct: 5   FVCHQQHSVAHSHYQPHSHFHHHT 28


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,751,955
Number of Sequences: 53049
Number of extensions: 604771
Number of successful extensions: 2147
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2026
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2143
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4464466254
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)