Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_B07
         (1155 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            26   1.8  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    26   2.4  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    24   7.3  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 26.2 bits (55), Expect = 1.8
 Identities = 14/45 (31%), Positives = 14/45 (31%)
 Frame = +1

Query: 292 PPPXGXKXXPPXXPXKKKXKXPXGXXXGGXPPXXLSXGGGGXRXP 426
           PPP      P   P       P G   G  PP     G GG   P
Sbjct: 581 PPPAPPPPPPMGPPPSPLAGGPLGGPAGSRPPLPNLLGFGGAAPP 625


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 25.8 bits (54), Expect = 2.4
 Identities = 11/32 (34%), Positives = 13/32 (40%)
 Frame = +1

Query: 289 PPPPXGXKXXPPXXPXKKKXKXPXGXXXGGXP 384
           PP P G    PP  P   + + P G   G  P
Sbjct: 211 PPRPGGMYPQPPGVPMPMRPQMPPGAVPGMQP 242


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 24.2 bits (50), Expect = 7.3
 Identities = 10/21 (47%), Positives = 10/21 (47%)
 Frame = +3

Query: 570 GGGVXXXTPPPPPXTXRXQPP 632
           G G    T PPPP     QPP
Sbjct: 909 GPGAAAATGPPPPTHRLEQPP 929


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 646,353
Number of Sequences: 2352
Number of extensions: 10902
Number of successful extensions: 32
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 129981546
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)