Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP10_F_B04
(922 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A5UZQ2 Cluster: Translation initiation factor IF-2; n=5... 36 1.5
UniRef50_A1Z8H7 Cluster: CG13214-PA, isoform A; n=5; Eukaryota|R... 36 1.5
UniRef50_UPI0000DB6D2F Cluster: PREDICTED: hypothetical protein;... 36 1.9
UniRef50_UPI00015B963D Cluster: UPI00015B963D related cluster; n... 35 3.4
UniRef50_UPI0000E23B0D Cluster: PREDICTED: hypothetical protein;... 34 4.4
UniRef50_A5P2Y6 Cluster: Putative uncharacterized protein; n=4; ... 34 4.4
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 34 4.4
UniRef50_A6SS40 Cluster: Putative uncharacterized protein; n=2; ... 33 7.8
>UniRef50_A5UZQ2 Cluster: Translation initiation factor IF-2; n=5;
Chloroflexi (class)|Rep: Translation initiation factor
IF-2 - Roseiflexus sp. RS-1
Length = 729
Score = 35.9 bits (79), Expect = 1.5
Identities = 19/41 (46%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = -2
Query: 921 GPGCPXXGXGSG-PGGXPHXGXXXGGNGXGXPP*GRXGXRP 802
GPG P G G G PGG G GG G G P GR P
Sbjct: 36 GPGNPGGGRGPGSPGGGRGPGSPGGGRGPGSPGGGRGPGNP 76
Score = 35.5 bits (78), Expect = 1.9
Identities = 19/41 (46%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = -2
Query: 921 GPGCPXXGXGSG-PGGXPHXGXXXGGNGXGXPP*GRXGXRP 802
GPG P G G G PGG G GG G G P GR P
Sbjct: 27 GPGNPGGGRGPGNPGGGRGPGSPGGGRGPGSPGGGRGPGSP 67
Score = 35.5 bits (78), Expect = 1.9
Identities = 18/36 (50%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = -2
Query: 921 GPGCPXXGXGSG-PGGXPHXGXXXGGNGXGXPP*GR 817
GPG P G G G PGG G GG G G P GR
Sbjct: 45 GPGSPGGGRGPGSPGGGRGPGSPGGGRGPGNPGGGR 80
>UniRef50_A1Z8H7 Cluster: CG13214-PA, isoform A; n=5; Eukaryota|Rep:
CG13214-PA, isoform A - Drosophila melanogaster (Fruit
fly)
Length = 610
Score = 35.9 bits (79), Expect = 1.5
Identities = 25/66 (37%), Positives = 25/66 (37%)
Frame = -2
Query: 921 GPGCPXXGXGSGPGGXPHXGXXXGGNGXGXPP*GRXGXRPXXAGXLDFWRLXXGGGAXGX 742
G G P G G GPGG G G NG G G RP G GGG G
Sbjct: 66 GGGGPAGGFGGGPGGGGAGGFGGGNNGLG----GFANGRPIAPG---------GGGGGGG 112
Query: 741 TPXXRP 724
P RP
Sbjct: 113 APAPRP 118
>UniRef50_UPI0000DB6D2F Cluster: PREDICTED: hypothetical protein;
n=1; Apis mellifera|Rep: PREDICTED: hypothetical protein
- Apis mellifera
Length = 143
Score = 35.5 bits (78), Expect = 1.9
Identities = 22/60 (36%), Positives = 25/60 (41%), Gaps = 1/60 (1%)
Frame = -2
Query: 921 GPGCPXXGXGSGPGGXPHXGXXXGGNGXGXPP*GRXGXRPXXA-GXLDFWRLXXGGGAXG 745
G G G G G GG G GG+G G G G + G + WR GGGA G
Sbjct: 32 GGGGGGGGIGGGDGGGRGGGGGSGGDGGGIGGGGTGGGAGGGSGGDGNVWRCGGGGGAGG 91
>UniRef50_UPI00015B963D Cluster: UPI00015B963D related cluster; n=1;
unknown|Rep: UPI00015B963D UniRef100 entry - unknown
Length = 438
Score = 34.7 bits (76), Expect = 3.4
Identities = 20/59 (33%), Positives = 21/59 (35%)
Frame = -2
Query: 900 GXGSGPGGXPHXGXXXGGNGXGXPP*GRXGXRPXXAGXLDFWRLXXGGGAXGXTPXXRP 724
G G GPGG G G G G G G P +G GGGA P P
Sbjct: 308 GDGPGPGGPGSAGQGPNGQGPGGQ--GMGGRNPGGSGPAGSGHSAPGGGAPSSRPGGEP 364
>UniRef50_UPI0000E23B0D Cluster: PREDICTED: hypothetical protein;
n=1; Pan troglodytes|Rep: PREDICTED: hypothetical
protein - Pan troglodytes
Length = 556
Score = 34.3 bits (75), Expect = 4.4
Identities = 19/43 (44%), Positives = 21/43 (48%), Gaps = 3/43 (6%)
Frame = -2
Query: 921 GPGC---PXXGXGSGPGGXPHXGXXXGGNGXGXPP*GRXGXRP 802
GPG P G G GP G + G GGNG G P + G RP
Sbjct: 186 GPGTRTRPEPGRGRGPAGAVNWGGYRGGNGEGPGP--KPGRRP 226
>UniRef50_A5P2Y6 Cluster: Putative uncharacterized protein; n=4;
cellular organisms|Rep: Putative uncharacterized protein
- Methylobacterium sp. 4-46
Length = 1080
Score = 34.3 bits (75), Expect = 4.4
Identities = 27/84 (32%), Positives = 33/84 (39%)
Frame = +2
Query: 569 VLDSLTPCPRSXGXGDRXXSXXRRVXRYPQNRGXRPXXXXTRRXXQRXAPQKGRXXGVXP 748
V+D L R GDR R R P+ RG R R P++GR G P
Sbjct: 770 VVDVLRRSGRDGRAGDRRPHGRERRPRPPERRGSRRRLRGHERGRGLPRPRRGR--GEHP 827
Query: 749 XAPPPXXSLQKSRXPAXXGRXPXR 820
AP P ++ R A G P R
Sbjct: 828 DAPRPG---RRDRCAAARGPRPHR 848
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 34.3 bits (75), Expect = 4.4
Identities = 15/25 (60%), Positives = 15/25 (60%)
Frame = +2
Query: 500 VPXXLXNRPTHGXRRXXYWAXCRVL 574
VP L NRPT G RR YWA R L
Sbjct: 23 VPAALMNRPTRGERRFAYWALFRFL 47
>UniRef50_A6SS40 Cluster: Putative uncharacterized protein; n=2;
Sclerotiniaceae|Rep: Putative uncharacterized protein -
Botryotinia fuckeliana B05.10
Length = 469
Score = 33.5 bits (73), Expect = 7.8
Identities = 18/40 (45%), Positives = 18/40 (45%)
Frame = -2
Query: 921 GPGCPXXGXGSGPGGXPHXGXXXGGNGXGXPP*GRXGXRP 802
GPG G G GPGG P GG G G PP R P
Sbjct: 51 GPGNHGPGKGKGPGGKP-----PGGPGRGPPPHARMDNHP 85
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 513,691,166
Number of Sequences: 1657284
Number of extensions: 6386890
Number of successful extensions: 18334
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11174
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16571
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 84441173866
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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