Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP10_F_B04
(922 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_04_0400 - 22608519-22608844,22609044-22609122 33 0.24
05_05_0135 - 22626163-22626198,22626391-22626441,22626516-226266... 33 0.32
07_03_0329 + 16840051-16840917,16840999-16841342,16841444-168415... 30 2.3
07_03_0559 + 19475893-19476783 30 3.0
05_07_0102 + 27700395-27700426,27701034-27702087,27703205-27703420 30 3.0
07_03_1136 + 24218601-24218734,24218769-24219906 29 5.2
03_02_0457 + 8638318-8638336,8640394-8640497,8640613-8640778,864... 29 5.2
10_08_0214 - 15915156-15915713 29 6.9
08_02_1019 - 23657175-23658047 29 6.9
07_03_1751 - 29215074-29216270 29 6.9
01_01_0446 + 3321832-3322232,3322398-3322455,3322810-3323748,332... 29 6.9
11_06_0610 - 25449085-25453284 28 9.1
06_03_0790 - 24636805-24637770 28 9.1
06_03_0425 - 20659298-20659634,20659964-20660075,20660161-20660272 28 9.1
03_05_0690 + 26778567-26778804,26778950-26779024,26779995-267800... 28 9.1
>02_04_0400 - 22608519-22608844,22609044-22609122
Length = 134
Score = 33.5 bits (73), Expect = 0.24
Identities = 22/66 (33%), Positives = 22/66 (33%)
Frame = -2
Query: 915 GCPXXGXGSGPGGXPHXGXXXGGNGXGXPP*GRXGXRPXXAGXLDFWRLXXGGGAXGXTP 736
GC G G G GG G GG G G GR G G GGG G
Sbjct: 32 GCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGRGGGGGGGGGGGGGGGGGGGGGGGGGGG 91
Query: 735 XXRPFW 718
P W
Sbjct: 92 GYYPPW 97
Score = 28.3 bits (60), Expect = 9.1
Identities = 21/72 (29%), Positives = 23/72 (31%), Gaps = 1/72 (1%)
Frame = -2
Query: 921 GPGCPXXGXGSGPGGXPHXGXXXGGNGXGXPP*GRXGXRPXXAGXLDFWRLXXGG-GAXG 745
G G G G G GG G GG G G G G G ++ GG G
Sbjct: 46 GGGGGGGGGGGGGGGGGGRGGGGGGGGGGGGGGGGGGGGGGGGGGGGYYPPWNGGYYPPG 105
Query: 744 XTPXXRPFWGAC 709
P W C
Sbjct: 106 PGHHHNPHWHGC 117
>05_05_0135 -
22626163-22626198,22626391-22626441,22626516-22626608,
22627249-22627254,22628051-22628180,22628333-22628583
Length = 188
Score = 33.1 bits (72), Expect = 0.32
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = -2
Query: 921 GPGCPXXGXGSGPGGXPHXGXXXGGNGXG 835
GPG P G GS G P G GG G G
Sbjct: 4 GPGSPGGGGGSHESGSPRGGGGGGGGGGG 32
>07_03_0329 +
16840051-16840917,16840999-16841342,16841444-16841574,
16841671-16841792,16841877-16841983,16842104-16842236,
16842342-16842458,16842560-16842667,16842716-16842742,
16842759-16842830,16843462-16843584,16843671-16843833,
16844140-16844264,16844355-16844489,16844574-16844677,
16844772-16844834,16844930-16844993,16845186-16845318,
16845414-16845487,16845603-16845697,16845799-16845830,
16846201-16846355
Length = 1097
Score = 30.3 bits (65), Expect = 2.3
Identities = 18/52 (34%), Positives = 19/52 (36%)
Frame = -2
Query: 900 GXGSGPGGXPHXGXXXGGNGXGXPP*GRXGXRPXXAGXLDFWRLXXGGGAXG 745
G G G GG G G G G G G R G + R GGG G
Sbjct: 118 GYGRGGGGYHGDGERGYGRGGGGGGGGGGGYRGDDEGRSSYGRARGGGGGGG 169
Score = 29.5 bits (63), Expect = 3.9
Identities = 19/52 (36%), Positives = 21/52 (40%)
Frame = -2
Query: 900 GXGSGPGGXPHXGXXXGGNGXGXPP*GRXGXRPXXAGXLDFWRLXXGGGAXG 745
G G G GG P+ G GG G G GR G + R GGG G
Sbjct: 60 GGGGGGGGPPYYGGGGGGGGGGGGQ-GR-GYYDDGGDGRGYQRGMEGGGGRG 109
>07_03_0559 + 19475893-19476783
Length = 296
Score = 29.9 bits (64), Expect = 3.0
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = -2
Query: 921 GPGCPXXGXGSGPGGXPHXGXXXGGNGXG 835
G GC G G G GG G GG G G
Sbjct: 97 GGGCEGGGFGGGVGGGSGAGGGLGGGGGG 125
>05_07_0102 + 27700395-27700426,27701034-27702087,27703205-27703420
Length = 433
Score = 29.9 bits (64), Expect = 3.0
Identities = 23/62 (37%), Positives = 24/62 (38%), Gaps = 3/62 (4%)
Frame = -2
Query: 921 GP-GCPXXGXGSGPGGXPHXGXXXG--GNGXGXPP*GRXGXRPXXAGXLDFWRLXXGGGA 751
GP GC G SG GG P G G G+G P G G D L GGG
Sbjct: 23 GPRGCGGGGPRSGGGGGPRGGGGGGPRGSGSSKPRRGDGGLGCGRGDDSDL-GLGYGGGG 81
Query: 750 XG 745
G
Sbjct: 82 SG 83
Score = 28.3 bits (60), Expect = 9.1
Identities = 17/44 (38%), Positives = 18/44 (40%)
Frame = -2
Query: 921 GPGCPXXGXGSGPGGXPHXGXXXGGNGXGXPP*GRXGXRPXXAG 790
G G P G G GP G G GG G P G G P +G
Sbjct: 12 GGGNPRGGGGGGPRGCGGGGPRSGGGGG---PRGGGGGGPRGSG 52
>07_03_1136 + 24218601-24218734,24218769-24219906
Length = 423
Score = 29.1 bits (62), Expect = 5.2
Identities = 20/59 (33%), Positives = 21/59 (35%)
Frame = -2
Query: 921 GPGCPXXGXGSGPGGXPHXGXXXGGNGXGXPP*GRXGXRPXXAGXLDFWRLXXGGGAXG 745
G G G G PGG G GG G G P G G L + GGG G
Sbjct: 187 GGGGGGGGPGRAPGGGGGGGGLGGGGGEGGAPERVIGGGGGGGGAL---KCVVGGGGGG 242
Score = 28.3 bits (60), Expect = 9.1
Identities = 20/55 (36%), Positives = 22/55 (40%), Gaps = 3/55 (5%)
Frame = -2
Query: 900 GXGSGPGGXPHXGXXXGGNGXGXPP*GRXGXRPXXAGXLDFW---RLXXGGGAXG 745
G G GPG P G GG G G P G G G + R+ GGG G
Sbjct: 177 GGGGGPGRAP--GGGGGGGGPGRAPGGGGGGGGLGGGGGEGGAPERVIGGGGGGG 229
>03_02_0457 +
8638318-8638336,8640394-8640497,8640613-8640778,
8641403-8641467
Length = 117
Score = 29.1 bits (62), Expect = 5.2
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = -2
Query: 894 GSGPGGXPHXGXXXGGNGXGXP 829
G GPGG P+ G GG G P
Sbjct: 64 GGGPGGGPYGGGRGGGGGLRGP 85
>10_08_0214 - 15915156-15915713
Length = 185
Score = 28.7 bits (61), Expect = 6.9
Identities = 21/59 (35%), Positives = 23/59 (38%)
Frame = -2
Query: 921 GPGCPXXGXGSGPGGXPHXGXXXGGNGXGXPP*GRXGXRPXXAGXLDFWRLXXGGGAXG 745
GPG G G G GG G G+G G G G AG + R GGG G
Sbjct: 30 GPGGGGGGGGGGEGGGGGYGGSGYGSGSGY---GEGGGSGGAAGG-GYGRGGGGGGGGG 84
>08_02_1019 - 23657175-23658047
Length = 290
Score = 28.7 bits (61), Expect = 6.9
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = -2
Query: 900 GXGSGPGGXPHXGXXXGGNGXGXPP*GRXGXR 805
G G G GG P G GG G G G G R
Sbjct: 31 GLGGGGGGVPKPGGGVGGGGGGGGGGGGGGAR 62
>07_03_1751 - 29215074-29216270
Length = 398
Score = 28.7 bits (61), Expect = 6.9
Identities = 19/52 (36%), Positives = 19/52 (36%)
Frame = -2
Query: 900 GXGSGPGGXPHXGXXXGGNGXGXPP*GRXGXRPXXAGXLDFWRLXXGGGAXG 745
G G G GG G GG G G G G AG GGGA G
Sbjct: 114 GFGGGKGGGLGGGGGLGGGGGGGAGGGLGGGAGGGAGAGVGGGAGAGGGAGG 165
>01_01_0446 +
3321832-3322232,3322398-3322455,3322810-3323748,
3324504-3324654,3324740-3324818,3325826-3325934
Length = 578
Score = 28.7 bits (61), Expect = 6.9
Identities = 25/74 (33%), Positives = 27/74 (36%), Gaps = 2/74 (2%)
Frame = -2
Query: 921 GPGCPXXGXGSGPGGXPHXGXXXGGNGXGXPP*GRXGXRPXXAGXLDFWRLXXGGGAXG- 745
G G G G G GG + G GG G G G G R G GGG G
Sbjct: 70 GYGGGGGGYGGGGGG--YGGGGRGGGGGGGYGGGGGGGRGGGGGGGGRGGGGRGGGRDGD 127
Query: 744 -XTPXXRPFWGACL 706
P R GAC+
Sbjct: 128 WVCPDPRILHGACV 141
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 28.3 bits (60), Expect = 9.1
Identities = 28/120 (23%), Positives = 34/120 (28%), Gaps = 2/120 (1%)
Frame = +1
Query: 559 ALPGPRLTDSLPPVXRXXXPXXFSXKAGNXXPTKSGXPPEXXXXPEXXXKAXPPKRPXXW 738
+LP P PP + P + P KS PP P K+ PP P
Sbjct: 1119 SLPPPATVSLPPPTVKPLPPPV--PVSSPPPPEKSPPPPAPVILPPPPIKSPPPPAPVIS 1176
Query: 739 XXXXXXXXXXXXXKIQXXSPXGA--XXXPXLWXXPXAVSPPXXPXVGXPPGXXXRPXXXA 912
I P + P + P SPP V PP P A
Sbjct: 1177 PPPPVKSPPPPAPVILPPPPVKSPPPPAPVISPPPPVKSPPPPAPVILPPPPVKSPPPPA 1236
>06_03_0790 - 24636805-24637770
Length = 321
Score = 28.3 bits (60), Expect = 9.1
Identities = 20/59 (33%), Positives = 20/59 (33%)
Frame = -2
Query: 921 GPGCPXXGXGSGPGGXPHXGXXXGGNGXGXPP*GRXGXRPXXAGXLDFWRLXXGGGAXG 745
G G G G G GG G GG G G G G R G GGG G
Sbjct: 83 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGRGGGGGGGGGGGGGGGGGGGG 141
Score = 28.3 bits (60), Expect = 9.1
Identities = 20/59 (33%), Positives = 20/59 (33%)
Frame = -2
Query: 921 GPGCPXXGXGSGPGGXPHXGXXXGGNGXGXPP*GRXGXRPXXAGXLDFWRLXXGGGAXG 745
G G G G G GG G GG G G GR G G GGG G
Sbjct: 87 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGRGGGGGGGGGGGGGGGGGGGGGGGG 145
>06_03_0425 - 20659298-20659634,20659964-20660075,20660161-20660272
Length = 186
Score = 28.3 bits (60), Expect = 9.1
Identities = 16/43 (37%), Positives = 17/43 (39%)
Frame = -2
Query: 900 GXGSGPGGXPHXGXXXGGNGXGXPP*GRXGXRPXXAGXLDFWR 772
G G G GG G GG G G P G G DFW+
Sbjct: 40 GGGGGYGGGGGGGYGGGGGGGGYSPSPTTG----FTGSCDFWK 78
>03_05_0690 +
26778567-26778804,26778950-26779024,26779995-26780099,
26780869-26781000,26781432-26781571,26782213-26782323,
26782690-26782812,26784166-26784267,26784536-26784546,
26784878-26785103,26785363-26785401,26785413-26785583,
26785674-26785753,26785976-26786039
Length = 538
Score = 28.3 bits (60), Expect = 9.1
Identities = 15/37 (40%), Positives = 16/37 (43%)
Frame = -2
Query: 921 GPGCPXXGXGSGPGGXPHXGXXXGGNGXGXPP*GRXG 811
G G G G G GG GG+G G P GR G
Sbjct: 15 GGGGGGGGGGGGGGGGVGGDRGGGGSGGGGPGMGRRG 51
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,796,794
Number of Sequences: 37544
Number of extensions: 227339
Number of successful extensions: 1274
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 655
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1048
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2624101760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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