Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP10_F_B02
(948 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 37 0.018
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 37 0.018
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 33 0.23
U55373-5|AAC25888.1| 289|Caenorhabditis elegans Collagen protei... 33 0.30
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 33 0.30
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 33 0.30
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 33 0.30
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 33 0.30
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 33 0.39
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 33 0.39
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 31 0.51
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 32 0.69
Z99281-39|CAE45094.2| 665|Caenorhabditis elegans Hypothetical p... 31 0.91
Z99281-38|CAE45095.2| 845|Caenorhabditis elegans Hypothetical p... 31 0.91
Z99281-36|CAB16527.3| 862|Caenorhabditis elegans Hypothetical p... 31 0.91
Z99281-34|CAJ44243.1| 917|Caenorhabditis elegans Hypothetical p... 31 0.91
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 31 0.91
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 31 0.91
U55373-4|ABR92605.1| 210|Caenorhabditis elegans Collagen protei... 31 0.91
U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical pr... 31 0.91
U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 31 0.91
AY611484-1|AAT37523.1| 917|Caenorhabditis elegans epidermal gro... 31 0.91
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 31 0.91
U50310-5|AAA92541.1| 318|Caenorhabditis elegans Ground-like (gr... 31 1.2
AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical ... 31 1.2
Z70309-6|CAA94360.1| 324|Caenorhabditis elegans Hypothetical pr... 31 1.6
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 31 1.6
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 31 1.6
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 31 1.6
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 31 1.6
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 31 1.6
Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical pr... 30 2.1
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 30 2.1
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 30 2.8
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 30 2.8
AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical ... 30 2.8
Z81135-1|CAB03453.1| 627|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical pr... 29 3.7
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 29 3.7
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 29 3.7
AY438643-1|AAR00670.1| 627|Caenorhabditis elegans abnormal DAue... 29 3.7
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 29 3.7
Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical pr... 29 4.9
L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family ... 29 4.9
Z81560-2|CAB04547.1| 1021|Caenorhabditis elegans Hypothetical pr... 29 6.4
Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical pr... 29 6.4
V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein ( Caeno... 29 6.4
U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homolog... 29 6.4
U80023-1|AAG24037.1| 180|Caenorhabditis elegans Hypothetical pr... 29 6.4
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 29 6.4
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 29 6.4
U40797-15|AAB37553.2| 1004|Caenorhabditis elegans Temporarily as... 29 6.4
U40187-2|AAA81159.1| 282|Caenorhabditis elegans Collagen protei... 29 6.4
J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein ( C.ele... 29 6.4
AL132898-14|CAC14406.1| 1641|Caenorhabditis elegans Hypothetical... 29 6.4
AL032646-7|CAA21680.1| 485|Caenorhabditis elegans Hypothetical ... 29 6.4
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 29 6.4
AC006696-4|AAF39985.1| 215|Caenorhabditis elegans Hypothetical ... 29 6.4
AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin pro... 29 6.4
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 28 6.8
Z95559-1|CAB08999.1| 289|Caenorhabditis elegans Hypothetical pr... 28 8.5
U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter... 28 8.5
U29380-1|AAA68740.1| 346|Caenorhabditis elegans Hypothetical pr... 28 8.5
AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical... 28 8.5
AC084158-11|AAK68558.1| 555|Caenorhabditis elegans Hypothetical... 28 8.5
AC024838-7|AAF60820.1| 381|Caenorhabditis elegans Hypothetical ... 28 8.5
AC024838-3|AAF60821.1| 381|Caenorhabditis elegans Hypothetical ... 28 8.5
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 37.1 bits (82), Expect = 0.018
Identities = 22/70 (31%), Positives = 24/70 (34%)
Frame = +2
Query: 728 PPPXPXMXPPPPPPXYKXPXXXXXXXXXXXXXXXXPRAXPXEXRPXLPXGXPGXXXRPPD 907
PP P M PPPPP + P P P P P PG PP
Sbjct: 310 PPGMPGMPPPPPPSRF-GPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPP- 367
Query: 908 AXPAXXAAPP 937
P+ APP
Sbjct: 368 --PSRPPAPP 375
Score = 31.5 bits (68), Expect = 0.91
Identities = 21/73 (28%), Positives = 23/73 (31%), Gaps = 3/73 (4%)
Frame = +2
Query: 728 PPPXPXMXPPPPPPXYKXPXXXXXXXXXXXXXXXXPRAXPXEXRPXLPXGXPGXXXRPPD 907
PPP P + P PPP P P P R P G PG PP
Sbjct: 264 PPPPPSVTPMPPPMP-PTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPP 322
Query: 908 A---XPAXXAAPP 937
+ P PP
Sbjct: 323 SRFGPPGMGGMPP 335
Score = 30.7 bits (66), Expect = 1.6
Identities = 19/52 (36%), Positives = 20/52 (38%), Gaps = 1/52 (1%)
Frame = +1
Query: 793 PPRXPPXRGX-PXXPPGXTSRXXPPXPXGXTGAXLXXPXRXPRXXGRPPPXR 945
PP PP G P PP +S PP P G P P PPP R
Sbjct: 274 PPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPG-RTPGPPGMPGMPPPPPPSR 324
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 37.1 bits (82), Expect = 0.018
Identities = 22/70 (31%), Positives = 24/70 (34%)
Frame = +2
Query: 728 PPPXPXMXPPPPPPXYKXPXXXXXXXXXXXXXXXXPRAXPXEXRPXLPXGXPGXXXRPPD 907
PP P M PPPPP + P P P P P PG PP
Sbjct: 320 PPGMPGMPPPPPPSRF-GPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPP- 377
Query: 908 AXPAXXAAPP 937
P+ APP
Sbjct: 378 --PSRPPAPP 385
Score = 31.5 bits (68), Expect = 0.91
Identities = 21/73 (28%), Positives = 23/73 (31%), Gaps = 3/73 (4%)
Frame = +2
Query: 728 PPPXPXMXPPPPPPXYKXPXXXXXXXXXXXXXXXXPRAXPXEXRPXLPXGXPGXXXRPPD 907
PPP P + P PPP P P P R P G PG PP
Sbjct: 274 PPPPPSVTPMPPPMP-PTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPP 332
Query: 908 A---XPAXXAAPP 937
+ P PP
Sbjct: 333 SRFGPPGMGGMPP 345
Score = 30.7 bits (66), Expect = 1.6
Identities = 19/52 (36%), Positives = 20/52 (38%), Gaps = 1/52 (1%)
Frame = +1
Query: 793 PPRXPPXRGX-PXXPPGXTSRXXPPXPXGXTGAXLXXPXRXPRXXGRPPPXR 945
PP PP G P PP +S PP P G P P PPP R
Sbjct: 284 PPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPG-RTPGPPGMPGMPPPPPPSR 334
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 33.5 bits (73), Expect = 0.23
Identities = 21/71 (29%), Positives = 21/71 (29%)
Frame = -1
Query: 939 RGGAAXXAGXASGGRXXXPGXPXGXXGRXSXGXARGXXXXXXXXXXXXXXXXGXLXXGGG 760
RGG G GG G G G G G GGG
Sbjct: 57 RGGGGSGWGGGRGGGWGNNGGGGNWGGNGGGGNGGGGRGGGGGGGGGRGGGGGGRGGGGG 116
Query: 759 GGGXIXGXGGG 727
GGG G GGG
Sbjct: 117 GGGGRGGGGGG 127
Score = 28.3 bits (60), Expect = 8.5
Identities = 22/72 (30%), Positives = 24/72 (33%), Gaps = 2/72 (2%)
Frame = -1
Query: 936 GGAAXXAGXASG-GRXXXPGXPXGXXGRXSXGXARGXXXXXXXXXXXXXXXXGXLXXGGG 760
GG+ G G G G G G + G RG G GGG
Sbjct: 60 GGSGWGGGRGGGWGNNGGGGNWGGNGGGGNGGGGRGGGGGGGGGRGGGGGGRGGGGGGGG 119
Query: 759 G-GGXIXGXGGG 727
G GG G GGG
Sbjct: 120 GRGGGGGGRGGG 131
>U55373-5|AAC25888.1| 289|Caenorhabditis elegans Collagen protein
140, isoform a protein.
Length = 289
Score = 33.1 bits (72), Expect = 0.30
Identities = 18/49 (36%), Positives = 18/49 (36%), Gaps = 1/49 (2%)
Frame = +1
Query: 796 PRXPPXRGXPXXPPGXTSRXXPPXPXGXTGA-XLXXPXRXPRXXGRPPP 939
PR PP P P G R PP P G G P GRP P
Sbjct: 152 PRGPPGEVGPAGPSGDNGRKGPPGPPGGPGGPGEGGDGGRPGNPGRPGP 200
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 33.1 bits (72), Expect = 0.30
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = +2
Query: 728 PPPXPXMXPPPPPP 769
PPP P M PPPPPP
Sbjct: 67 PPPPPPMCPPPPPP 80
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 33.1 bits (72), Expect = 0.30
Identities = 16/44 (36%), Positives = 16/44 (36%)
Frame = +1
Query: 454 PXPRXGRFXXWXXSXPPPPXIXXXXXIXGGXGPPPPXGGXAXXP 585
P P G PPPP I GG PPPP G P
Sbjct: 728 PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPP 771
Score = 32.3 bits (70), Expect = 0.52
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = +1
Query: 499 PPPPXIXXXXXIXGGXGPPPPXGG 570
PPPP I GG PPPP GG
Sbjct: 727 PPPPPPGGLPPITGGPPPPPPPGG 750
Score = 31.1 bits (67), Expect = 1.2
Identities = 17/47 (36%), Positives = 17/47 (36%), Gaps = 3/47 (6%)
Frame = +1
Query: 805 PPXRGXPXXPPG---XTSRXXPPXPXGXTGAXLXXPXRXPRXXGRPP 936
PP G P PPG T PP P G P P G PP
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPP 753
Score = 29.9 bits (64), Expect = 2.8
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +2
Query: 728 PPPXPXMXPPPPPP 769
PPP P PPPPPP
Sbjct: 761 PPPPPGGCPPPPPP 774
Score = 29.9 bits (64), Expect = 2.8
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 452 PPXPGKGGXLXGXXPPPPP 508
PP P GG G PPPPP
Sbjct: 772 PPPPPPGGFKGGPPPPPPP 790
Score = 29.5 bits (63), Expect = 3.7
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = +1
Query: 499 PPPPXIXXXXXIXGGXGPPPPXGG 570
PPPP + I GG PPPP GG
Sbjct: 714 PPPPGLPP---ITGGPPPPPPPGG 734
Score = 29.1 bits (62), Expect = 4.9
Identities = 17/45 (37%), Positives = 18/45 (40%)
Frame = +2
Query: 452 PPXPGKGGXLXGXXPPPPPQXSXGXXISLGXRXLXPXXGGSRXSP 586
PP PG + G PPPPP IS G P GG P
Sbjct: 729 PPPPGGLPPITGGPPPPPPPGGL-PPISGGPPPPPPPPGGCPPPP 772
Score = 28.3 bits (60), Expect = 8.5
Identities = 18/55 (32%), Positives = 18/55 (32%), Gaps = 6/55 (10%)
Frame = +1
Query: 793 PPRXPPXRGXPXXPPGX------TSRXXPPXPXGXTGAXLXXPXRXPRXXGRPPP 939
PP PP G P PP T PP P G P P G PP
Sbjct: 716 PPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPP 770
Score = 28.3 bits (60), Expect = 8.5
Identities = 17/49 (34%), Positives = 17/49 (34%)
Frame = +1
Query: 793 PPRXPPXRGXPXXPPGXTSRXXPPXPXGXTGAXLXXPXRXPRXXGRPPP 939
PP PP G P G PP P G P P G PPP
Sbjct: 726 PPPPPPPGGLPPITGGPPP---PPPPGGLPPISGGPPPPPPPPGGCPPP 771
Score = 28.3 bits (60), Expect = 8.5
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +1
Query: 499 PPPPXIXXXXXIXGGXGPPPPXG 567
PPPP GG PPPP G
Sbjct: 769 PPPPPPPPPGGFKGGPPPPPPPG 791
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 33.1 bits (72), Expect = 0.30
Identities = 16/44 (36%), Positives = 16/44 (36%)
Frame = +1
Query: 454 PXPRXGRFXXWXXSXPPPPXIXXXXXIXGGXGPPPPXGGXAXXP 585
P P G PPPP I GG PPPP G P
Sbjct: 728 PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPP 771
Score = 32.3 bits (70), Expect = 0.52
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = +1
Query: 499 PPPPXIXXXXXIXGGXGPPPPXGG 570
PPPP I GG PPPP GG
Sbjct: 727 PPPPPPGGLPPITGGPPPPPPPGG 750
Score = 31.1 bits (67), Expect = 1.2
Identities = 17/47 (36%), Positives = 17/47 (36%), Gaps = 3/47 (6%)
Frame = +1
Query: 805 PPXRGXPXXPPG---XTSRXXPPXPXGXTGAXLXXPXRXPRXXGRPP 936
PP G P PPG T PP P G P P G PP
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPP 753
Score = 29.9 bits (64), Expect = 2.8
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +2
Query: 728 PPPXPXMXPPPPPP 769
PPP P PPPPPP
Sbjct: 761 PPPPPGGCPPPPPP 774
Score = 29.9 bits (64), Expect = 2.8
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 452 PPXPGKGGXLXGXXPPPPP 508
PP P GG G PPPPP
Sbjct: 772 PPPPPPGGFKGGPPPPPPP 790
Score = 29.5 bits (63), Expect = 3.7
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = +1
Query: 499 PPPPXIXXXXXIXGGXGPPPPXGG 570
PPPP + I GG PPPP GG
Sbjct: 714 PPPPGLPP---ITGGPPPPPPPGG 734
Score = 29.1 bits (62), Expect = 4.9
Identities = 17/45 (37%), Positives = 18/45 (40%)
Frame = +2
Query: 452 PPXPGKGGXLXGXXPPPPPQXSXGXXISLGXRXLXPXXGGSRXSP 586
PP PG + G PPPPP IS G P GG P
Sbjct: 729 PPPPGGLPPITGGPPPPPPPGGL-PPISGGPPPPPPPPGGCPPPP 772
Score = 28.3 bits (60), Expect = 8.5
Identities = 18/55 (32%), Positives = 18/55 (32%), Gaps = 6/55 (10%)
Frame = +1
Query: 793 PPRXPPXRGXPXXPPGX------TSRXXPPXPXGXTGAXLXXPXRXPRXXGRPPP 939
PP PP G P PP T PP P G P P G PP
Sbjct: 716 PPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPP 770
Score = 28.3 bits (60), Expect = 8.5
Identities = 17/49 (34%), Positives = 17/49 (34%)
Frame = +1
Query: 793 PPRXPPXRGXPXXPPGXTSRXXPPXPXGXTGAXLXXPXRXPRXXGRPPP 939
PP PP G P G PP P G P P G PPP
Sbjct: 726 PPPPPPPGGLPPITGGPPP---PPPPGGLPPISGGPPPPPPPPGGCPPP 771
Score = 28.3 bits (60), Expect = 8.5
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +1
Query: 499 PPPPXIXXXXXIXGGXGPPPPXG 567
PPPP GG PPPP G
Sbjct: 769 PPPPPPPPPGGFKGGPPPPPPPG 791
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 33.1 bits (72), Expect = 0.30
Identities = 16/44 (36%), Positives = 16/44 (36%)
Frame = +1
Query: 454 PXPRXGRFXXWXXSXPPPPXIXXXXXIXGGXGPPPPXGGXAXXP 585
P P G PPPP I GG PPPP G P
Sbjct: 311 PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPP 354
Score = 32.3 bits (70), Expect = 0.52
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = +1
Query: 499 PPPPXIXXXXXIXGGXGPPPPXGG 570
PPPP I GG PPPP GG
Sbjct: 310 PPPPPPGGLPPITGGPPPPPPPGG 333
Score = 31.1 bits (67), Expect = 1.2
Identities = 17/47 (36%), Positives = 17/47 (36%), Gaps = 3/47 (6%)
Frame = +1
Query: 805 PPXRGXPXXPPG---XTSRXXPPXPXGXTGAXLXXPXRXPRXXGRPP 936
PP G P PPG T PP P G P P G PP
Sbjct: 290 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPP 336
Score = 29.9 bits (64), Expect = 2.8
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +2
Query: 728 PPPXPXMXPPPPPP 769
PPP P PPPPPP
Sbjct: 344 PPPPPGGCPPPPPP 357
Score = 29.9 bits (64), Expect = 2.8
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 452 PPXPGKGGXLXGXXPPPPP 508
PP P GG G PPPPP
Sbjct: 355 PPPPPPGGFKGGPPPPPPP 373
Score = 29.5 bits (63), Expect = 3.7
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = +1
Query: 499 PPPPXIXXXXXIXGGXGPPPPXGG 570
PPPP + I GG PPPP GG
Sbjct: 297 PPPPGLPP---ITGGPPPPPPPGG 317
Score = 29.1 bits (62), Expect = 4.9
Identities = 17/45 (37%), Positives = 18/45 (40%)
Frame = +2
Query: 452 PPXPGKGGXLXGXXPPPPPQXSXGXXISLGXRXLXPXXGGSRXSP 586
PP PG + G PPPPP IS G P GG P
Sbjct: 312 PPPPGGLPPITGGPPPPPPPGGL-PPISGGPPPPPPPPGGCPPPP 355
Score = 28.3 bits (60), Expect = 8.5
Identities = 18/55 (32%), Positives = 18/55 (32%), Gaps = 6/55 (10%)
Frame = +1
Query: 793 PPRXPPXRGXPXXPPGX------TSRXXPPXPXGXTGAXLXXPXRXPRXXGRPPP 939
PP PP G P PP T PP P G P P G PP
Sbjct: 299 PPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPP 353
Score = 28.3 bits (60), Expect = 8.5
Identities = 17/49 (34%), Positives = 17/49 (34%)
Frame = +1
Query: 793 PPRXPPXRGXPXXPPGXTSRXXPPXPXGXTGAXLXXPXRXPRXXGRPPP 939
PP PP G P G PP P G P P G PPP
Sbjct: 309 PPPPPPPGGLPPITGGPPP---PPPPGGLPPISGGPPPPPPPPGGCPPP 354
Score = 28.3 bits (60), Expect = 8.5
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +1
Query: 499 PPPPXIXXXXXIXGGXGPPPPXG 567
PPPP GG PPPP G
Sbjct: 352 PPPPPPPPPGGFKGGPPPPPPPG 374
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 32.7 bits (71), Expect = 0.39
Identities = 16/40 (40%), Positives = 16/40 (40%)
Frame = -1
Query: 570 PPXXGXRXLXPXDXXXPXDXWGGGGGXXPXXKPPXPGXGG 451
PP G P P GGGGG P P PG GG
Sbjct: 782 PPRGGPGAPPPPGMRPPPGAPGGGGGMYPPLIPTRPGPGG 821
Score = 28.3 bits (60), Expect = 8.5
Identities = 18/48 (37%), Positives = 19/48 (39%), Gaps = 1/48 (2%)
Frame = +1
Query: 808 PXRGXPXXPPGXTSRXXPPXPXGXTGAXLXXPXRXPR-XXGRPPPXRA 948
P RG P PP R P P G G + P R G PPP A
Sbjct: 782 PPRGGPGAPPPPGMRPPPGAPGG--GGGMYPPLIPTRPGPGGPPPNMA 827
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 32.7 bits (71), Expect = 0.39
Identities = 16/40 (40%), Positives = 16/40 (40%)
Frame = -1
Query: 570 PPXXGXRXLXPXDXXXPXDXWGGGGGXXPXXKPPXPGXGG 451
PP G P P GGGGG P P PG GG
Sbjct: 782 PPRGGPGAPPPPGMRPPPGAPGGGGGMYPPLIPTRPGPGG 821
Score = 28.3 bits (60), Expect = 8.5
Identities = 18/48 (37%), Positives = 19/48 (39%), Gaps = 1/48 (2%)
Frame = +1
Query: 808 PXRGXPXXPPGXTSRXXPPXPXGXTGAXLXXPXRXPR-XXGRPPPXRA 948
P RG P PP R P P G G + P R G PPP A
Sbjct: 782 PPRGGPGAPPPPGMRPPPGAPGG--GGGMYPPLIPTRPGPGGPPPNMA 827
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 30.7 bits (66), Expect = 1.6
Identities = 20/53 (37%), Positives = 20/53 (37%), Gaps = 2/53 (3%)
Frame = +1
Query: 793 PPRXPPXRGXPXXPPGXTSR--XXPPXPXGXTGAXLXXPXRXPRXXGRPPPXR 945
PPR PP R P PP R PP P P R P PPP R
Sbjct: 151 PPRSPPPRRPPMTPPSPQRRPPRTPPSPEPRN------PPRTPPSPIPPPPPR 197
Score = 26.2 bits (55), Expect(2) = 0.51
Identities = 20/66 (30%), Positives = 21/66 (31%), Gaps = 3/66 (4%)
Frame = +2
Query: 752 PPPPPPXYKXPXXXXXXXXXXXXXXXXPRAXPXEXRPXL--PXGXPGXXXRPPDAXPAXX 925
PPPPPP K PR P P P P RPP P+
Sbjct: 122 PPPPPPPRK--SRAGGSSPPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSPE 179
Query: 926 AA-PPR 940
PPR
Sbjct: 180 PRNPPR 185
Score = 24.6 bits (51), Expect(2) = 0.51
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = +2
Query: 728 PPPXPXMXPPPPPPXY 775
PPP P P PPP +
Sbjct: 70 PPPYPYQHPHQPPPAH 85
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 31.9 bits (69), Expect = 0.69
Identities = 21/70 (30%), Positives = 21/70 (30%)
Frame = -1
Query: 936 GGAAXXAGXASGGRXXXPGXPXGXXGRXSXGXARGXXXXXXXXXXXXXXXXGXLXXGGGG 757
GG G GG G G G G G G GGGG
Sbjct: 100 GGGGDFGGGMGGGGYGGGGYGGGGDGGGGYG-GYGGGGYGGMGGGPGGYGMGGYGGGGGG 158
Query: 756 GGXIXGXGGG 727
GG G GGG
Sbjct: 159 GGDFGGYGGG 168
>Z99281-39|CAE45094.2| 665|Caenorhabditis elegans Hypothetical
protein Y57G11C.24e protein.
Length = 665
Score = 31.5 bits (68), Expect = 0.91
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +2
Query: 728 PPPXPXMXPPPPPP 769
PPP P + PPPPPP
Sbjct: 468 PPPPPVVIPPPPPP 481
Score = 29.1 bits (62), Expect = 4.9
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +2
Query: 710 RXHAKXPPPXPXMXPPPPP 766
R H PPP + PPPPP
Sbjct: 463 REHVAPPPPPVVIPPPPPP 481
>Z99281-38|CAE45095.2| 845|Caenorhabditis elegans Hypothetical
protein Y57G11C.24d protein.
Length = 845
Score = 31.5 bits (68), Expect = 0.91
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +2
Query: 728 PPPXPXMXPPPPPP 769
PPP P + PPPPPP
Sbjct: 648 PPPPPVVIPPPPPP 661
Score = 29.1 bits (62), Expect = 4.9
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +2
Query: 710 RXHAKXPPPXPXMXPPPPP 766
R H PPP + PPPPP
Sbjct: 643 REHVAPPPPPVVIPPPPPP 661
>Z99281-36|CAB16527.3| 862|Caenorhabditis elegans Hypothetical
protein Y57G11C.24a protein.
Length = 862
Score = 31.5 bits (68), Expect = 0.91
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +2
Query: 728 PPPXPXMXPPPPPP 769
PPP P + PPPPPP
Sbjct: 665 PPPPPVVIPPPPPP 678
Score = 29.1 bits (62), Expect = 4.9
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +2
Query: 710 RXHAKXPPPXPXMXPPPPP 766
R H PPP + PPPPP
Sbjct: 660 REHVAPPPPPVVIPPPPPP 678
>Z99281-34|CAJ44243.1| 917|Caenorhabditis elegans Hypothetical
protein Y57G11C.24g protein.
Length = 917
Score = 31.5 bits (68), Expect = 0.91
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +2
Query: 728 PPPXPXMXPPPPPP 769
PPP P + PPPPPP
Sbjct: 720 PPPPPVVIPPPPPP 733
Score = 29.1 bits (62), Expect = 4.9
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +2
Query: 710 RXHAKXPPPXPXMXPPPPP 766
R H PPP + PPPPP
Sbjct: 715 REHVAPPPPPVVIPPPPPP 733
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 31.5 bits (68), Expect = 0.91
Identities = 20/70 (28%), Positives = 20/70 (28%)
Frame = -1
Query: 936 GGAAXXAGXASGGRXXXPGXPXGXXGRXSXGXARGXXXXXXXXXXXXXXXXGXLXXGGGG 757
GG G GG G G G G G GGGG
Sbjct: 100 GGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGG 159
Query: 756 GGXIXGXGGG 727
GG G GGG
Sbjct: 160 GGGCGGGGGG 169
Score = 28.3 bits (60), Expect = 8.5
Identities = 22/76 (28%), Positives = 24/76 (31%), Gaps = 3/76 (3%)
Frame = -1
Query: 945 AXRGGAAXXAGXASGGRXXXPGXPXGXXGRXSXGXARGXXXXXXXXXXXXXXXXGXLXXG 766
A GG G +SGG P G G + G G G
Sbjct: 205 APSGGGGCGGGGSSGG-GGYASAPSGGGGYATSGGGGSGGYATGGSSGGGYSSGGSSGGG 263
Query: 765 ---GGGGGXIXGXGGG 727
GGGGG G GGG
Sbjct: 264 YSTGGGGGYAGGGGGG 279
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 31.5 bits (68), Expect = 0.91
Identities = 20/70 (28%), Positives = 20/70 (28%)
Frame = -1
Query: 936 GGAAXXAGXASGGRXXXPGXPXGXXGRXSXGXARGXXXXXXXXXXXXXXXXGXLXXGGGG 757
GG G GG G G G G G GGGG
Sbjct: 100 GGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGG 159
Query: 756 GGXIXGXGGG 727
GG G GGG
Sbjct: 160 GGGCGGGGGG 169
Score = 28.3 bits (60), Expect = 8.5
Identities = 22/76 (28%), Positives = 24/76 (31%), Gaps = 3/76 (3%)
Frame = -1
Query: 945 AXRGGAAXXAGXASGGRXXXPGXPXGXXGRXSXGXARGXXXXXXXXXXXXXXXXGXLXXG 766
A GG G +SGG P G G + G G G
Sbjct: 205 APSGGGGCGGGGSSGG-GGYASAPSGGGGYATSGGGGSGGYATGGSSGGGYSSGGSSGGG 263
Query: 765 ---GGGGGXIXGXGGG 727
GGGGG G GGG
Sbjct: 264 YSTGGGGGYAGGGGGG 279
>U55373-4|ABR92605.1| 210|Caenorhabditis elegans Collagen protein
140, isoform b protein.
Length = 210
Score = 31.5 bits (68), Expect = 0.91
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +1
Query: 796 PRXPPXRGXPXXPPGXTSRXXPPXPXGXTG 885
PR PP P P G R PP P G G
Sbjct: 152 PRGPPGEVGPAGPSGDNGRKGPPGPPGGPG 181
>U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical
protein R144.4a protein.
Length = 360
Score = 31.5 bits (68), Expect = 0.91
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 728 PPPXPXMXPPPPPPXYKXP 784
PPP P PPPPPP P
Sbjct: 4 PPPPPPPPPPPPPPAASAP 22
Score = 30.3 bits (65), Expect = 2.1
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +2
Query: 728 PPPXPXMXPPPPPP 769
PPP P PPPPPP
Sbjct: 2 PPPPPPPPPPPPPP 15
Score = 30.3 bits (65), Expect = 2.1
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +2
Query: 728 PPPXPXMXPPPPPP 769
PPP P PPPPPP
Sbjct: 3 PPPPPPPPPPPPPP 16
Score = 23.8 bits (49), Expect(2) = 9.7
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = +2
Query: 728 PPPXPXMXPPPPPP 769
PPP PP PPP
Sbjct: 113 PPPTASSAPPVPPP 126
Score = 22.6 bits (46), Expect(2) = 9.7
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = +2
Query: 752 PPPPPPXYKXP 784
PPPPPP P
Sbjct: 157 PPPPPPPVSVP 167
>U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical
protein R144.4b protein.
Length = 362
Score = 31.5 bits (68), Expect = 0.91
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 728 PPPXPXMXPPPPPPXYKXP 784
PPP P PPPPPP P
Sbjct: 4 PPPPPPPPPPPPPPAASAP 22
Score = 30.3 bits (65), Expect = 2.1
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +2
Query: 728 PPPXPXMXPPPPPP 769
PPP P PPPPPP
Sbjct: 2 PPPPPPPPPPPPPP 15
Score = 30.3 bits (65), Expect = 2.1
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +2
Query: 728 PPPXPXMXPPPPPP 769
PPP P PPPPPP
Sbjct: 3 PPPPPPPPPPPPPP 16
Score = 23.8 bits (49), Expect(2) = 9.7
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = +2
Query: 728 PPPXPXMXPPPPPP 769
PPP PP PPP
Sbjct: 113 PPPTASSAPPVPPP 126
Score = 22.6 bits (46), Expect(2) = 9.7
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = +2
Query: 752 PPPPPPXYKXP 784
PPPPPP P
Sbjct: 157 PPPPPPPVSVP 167
>AY611484-1|AAT37523.1| 917|Caenorhabditis elegans epidermal growth
factor receptorpathway substrate 8 splice variant A
protein.
Length = 917
Score = 31.5 bits (68), Expect = 0.91
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +2
Query: 728 PPPXPXMXPPPPPP 769
PPP P + PPPPPP
Sbjct: 720 PPPPPVVIPPPPPP 733
Score = 29.1 bits (62), Expect = 4.9
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +2
Query: 710 RXHAKXPPPXPXMXPPPPP 766
R H PPP + PPPPP
Sbjct: 715 REHVAPPPPPVVIPPPPPP 733
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 31.5 bits (68), Expect = 0.91
Identities = 40/172 (23%), Positives = 47/172 (27%), Gaps = 10/172 (5%)
Frame = +2
Query: 452 PPXPGKGGXLXGXXPPPP---PQXSXGXXISLGXRXLXPXXGGSRXSPXXGDKXXXXXXX 622
PP P KG G PPPP PQ G + P GS P G+
Sbjct: 96 PPPPPKG---TGTPPPPPTGEPQDLSGEGNASRRPPPPPKGTGSPPPPPTGEPQDLSGEG 152
Query: 623 XXXXXXXAQXXRXGAXXXXXXXXXXXXXXRXHA-KXPPPXPXMXPPPPPPXYKXPXXXXX 799
G+ +A + PPP P PPPP P
Sbjct: 153 NASRRPPPPPKGTGSPPPPPTGEPQDLSTEGNASRRPPPPPKGTGTPPPPPTGEPQDLSA 212
Query: 800 XXXXXXXXXXXPRAXPXEXRPXLPXGXP------GXXXRPPDAXPAXXAAPP 937
P+ P P G P G R P P +PP
Sbjct: 213 EGYASRRPPPPPKGTGSPTPP--PTGEPQDLSGEGNASRRPPPPPKGTGSPP 262
Score = 28.3 bits (60), Expect = 8.5
Identities = 29/116 (25%), Positives = 35/116 (30%), Gaps = 5/116 (4%)
Frame = +2
Query: 452 PPXPGKGGXLXGXXPPPP---PQXSXGXXISLGXRXLXPXXG-GSRXSPXXGDKXXXXXX 619
PP P KG G PPPP PQ + R P G G+ P G+
Sbjct: 64 PPPPPKG---TGTPPPPPTGEPQDLSAEEGNASRRPPPPPKGTGTPPPPPTGEPQDLSGE 120
Query: 620 XXXXXXXXAQXXRXGAXXXXXXXXXXXXXXRXHA-KXPPPXPXMXPPPPPPXYKXP 784
G+ +A + PPP P PPPP P
Sbjct: 121 GNASRRPPPPPKGTGSPPPPPTGEPQDLSGEGNASRRPPPPPKGTGSPPPPPTGEP 176
>U50310-5|AAA92541.1| 318|Caenorhabditis elegans Ground-like (grd
related) protein 9 protein.
Length = 318
Score = 31.1 bits (67), Expect = 1.2
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +2
Query: 719 AKXPPPXPXMXPPPPPP 769
A PPP P PPPPPP
Sbjct: 133 APPPPPSPPPPPPPPPP 149
Score = 30.7 bits (66), Expect = 1.6
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +2
Query: 716 HAKXPPPXPXMXPPPPPP 769
+ + PPP P PPPPPP
Sbjct: 130 YIEAPPPPPSPPPPPPPP 147
>AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical
protein ZC123.1 protein.
Length = 730
Score = 31.1 bits (67), Expect = 1.2
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 728 PPPXPXMXPPPPPPXYKXP 784
PPP P PPPPPP P
Sbjct: 134 PPPTPAAPPPPPPPPPPAP 152
>Z70309-6|CAA94360.1| 324|Caenorhabditis elegans Hypothetical
protein R102.6 protein.
Length = 324
Score = 30.7 bits (66), Expect = 1.6
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +2
Query: 728 PPPXPXMXPPPPPP 769
PPP P PPPPPP
Sbjct: 244 PPPSPVCMPPPPPP 257
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 30.7 bits (66), Expect = 1.6
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 728 PPPXPXMXPPPPPPXYKXP 784
PPP P PPPPP Y P
Sbjct: 133 PPPPPPPHYPPPPPHYPPP 151
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 30.7 bits (66), Expect = 1.6
Identities = 21/75 (28%), Positives = 24/75 (32%), Gaps = 4/75 (5%)
Frame = +3
Query: 453 PPXPXRAVXFXGXLXPPPPRXPXARXYX----WGXGXSXPXXGXRGXPPKXGTNXPKTLW 620
PP P + G PPP P +G G G PP G P +
Sbjct: 367 PPPPVSSAP--GNFAPPPQSGPPGAFAPPPSAFGAPQGPGGPGGYGPPPPGGPGAPGSYG 424
Query: 621 SPXGXPXGXXXPAXG 665
P G P G P G
Sbjct: 425 PPQGGPGGFGPPPPG 439
Score = 28.3 bits (60), Expect = 8.5
Identities = 19/52 (36%), Positives = 19/52 (36%)
Frame = +1
Query: 793 PPRXPPXRGXPXXPPGXTSRXXPPXPXGXTGAXLXXPXRXPRXXGRPPPXRA 948
PP P G P G PP P G GA P P G PPP A
Sbjct: 413 PPGGPGAPGSYGPPQGGPGGFGPPPP-GGPGAYGPPPTGFP-PVGAPPPGAA 462
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 30.7 bits (66), Expect = 1.6
Identities = 22/77 (28%), Positives = 22/77 (28%), Gaps = 3/77 (3%)
Frame = +2
Query: 719 AKXPPPXPXMXPPPPPPXYKXPXXXXXXXXXXXXXXXXPRAXPXEXRPXLPXG---XPGX 889
A PP P PPPPP P P P P P G P
Sbjct: 260 AAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSP--PTGSLPPPQA 317
Query: 890 XXRPPDAXPAXXAAPPR 940
PP A PPR
Sbjct: 318 GGSPPPAGTGSPPPPPR 334
Score = 29.9 bits (64), Expect = 2.8
Identities = 17/54 (31%), Positives = 19/54 (35%), Gaps = 1/54 (1%)
Frame = +3
Query: 498 PPPPRXPXARXYXWGXGXSXPXXGXRGXPP-KXGTNXPKTLWSPXGXPXGXXXP 656
PPPP P G G P PP + G+ P SP P G P
Sbjct: 237 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPP 290
Score = 29.1 bits (62), Expect = 4.9
Identities = 12/35 (34%), Positives = 14/35 (40%)
Frame = +1
Query: 493 SXPPPPXIXXXXXIXGGXGPPPPXGGXAXXPXXWG 597
S PPPP + G PPPP + P G
Sbjct: 236 SPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTG 270
Score = 28.7 bits (61), Expect = 6.4
Identities = 14/44 (31%), Positives = 14/44 (31%)
Frame = +1
Query: 454 PXPRXGRFXXWXXSXPPPPXIXXXXXIXGGXGPPPPXGGXAXXP 585
P P G PPPP G PPPP G P
Sbjct: 257 PPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPP 300
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 30.7 bits (66), Expect = 1.6
Identities = 22/77 (28%), Positives = 22/77 (28%), Gaps = 3/77 (3%)
Frame = +2
Query: 719 AKXPPPXPXMXPPPPPPXYKXPXXXXXXXXXXXXXXXXPRAXPXEXRPXLPXG---XPGX 889
A PP P PPPPP P P P P P G P
Sbjct: 281 AAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSP--PTGSLPPPQA 338
Query: 890 XXRPPDAXPAXXAAPPR 940
PP A PPR
Sbjct: 339 GGSPPPAGTGSPPPPPR 355
Score = 29.9 bits (64), Expect = 2.8
Identities = 17/54 (31%), Positives = 19/54 (35%), Gaps = 1/54 (1%)
Frame = +3
Query: 498 PPPPRXPXARXYXWGXGXSXPXXGXRGXPP-KXGTNXPKTLWSPXGXPXGXXXP 656
PPPP P G G P PP + G+ P SP P G P
Sbjct: 258 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPP 311
Score = 29.1 bits (62), Expect = 4.9
Identities = 12/35 (34%), Positives = 14/35 (40%)
Frame = +1
Query: 493 SXPPPPXIXXXXXIXGGXGPPPPXGGXAXXPXXWG 597
S PPPP + G PPPP + P G
Sbjct: 257 SPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTG 291
Score = 28.7 bits (61), Expect = 6.4
Identities = 14/44 (31%), Positives = 14/44 (31%)
Frame = +1
Query: 454 PXPRXGRFXXWXXSXPPPPXIXXXXXIXGGXGPPPPXGGXAXXP 585
P P G PPPP G PPPP G P
Sbjct: 278 PPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPP 321
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 30.7 bits (66), Expect = 1.6
Identities = 22/77 (28%), Positives = 22/77 (28%), Gaps = 3/77 (3%)
Frame = +2
Query: 719 AKXPPPXPXMXPPPPPPXYKXPXXXXXXXXXXXXXXXXPRAXPXEXRPXLPXG---XPGX 889
A PP P PPPPP P P P P P G P
Sbjct: 266 AAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSP--PTGSLPPPQA 323
Query: 890 XXRPPDAXPAXXAAPPR 940
PP A PPR
Sbjct: 324 GGSPPPAGTGSPPPPPR 340
Score = 29.9 bits (64), Expect = 2.8
Identities = 17/54 (31%), Positives = 19/54 (35%), Gaps = 1/54 (1%)
Frame = +3
Query: 498 PPPPRXPXARXYXWGXGXSXPXXGXRGXPP-KXGTNXPKTLWSPXGXPXGXXXP 656
PPPP P G G P PP + G+ P SP P G P
Sbjct: 243 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPP 296
Score = 29.1 bits (62), Expect = 4.9
Identities = 12/35 (34%), Positives = 14/35 (40%)
Frame = +1
Query: 493 SXPPPPXIXXXXXIXGGXGPPPPXGGXAXXPXXWG 597
S PPPP + G PPPP + P G
Sbjct: 242 SPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTG 276
Score = 28.7 bits (61), Expect = 6.4
Identities = 14/44 (31%), Positives = 14/44 (31%)
Frame = +1
Query: 454 PXPRXGRFXXWXXSXPPPPXIXXXXXIXGGXGPPPPXGGXAXXP 585
P P G PPPP G PPPP G P
Sbjct: 263 PPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPP 306
>Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical
protein Y48E1B.1 protein.
Length = 497
Score = 30.3 bits (65), Expect = 2.1
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +2
Query: 728 PPPXPXMXPPPPPP 769
PPP P PPPPPP
Sbjct: 357 PPPPPPPPPPPPPP 370
Score = 28.3 bits (60), Expect = 8.5
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +2
Query: 728 PPPXPXMXPPPPPPXYKXP 784
P P P PPPPPP + P
Sbjct: 355 PAPPPPPPPPPPPPPPQTP 373
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 30.3 bits (65), Expect = 2.1
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 728 PPPXPXMXPPPPPPXYKXP 784
PPP P M PPPPP P
Sbjct: 73 PPPPPPMPCPPPPPPMPRP 91
Score = 28.3 bits (60), Expect = 8.5
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +2
Query: 719 AKXPPPXPXMXPPPPPP 769
A+ PP P PPPPPP
Sbjct: 62 AQFCPPPPICPPPPPPP 78
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 29.9 bits (64), Expect = 2.8
Identities = 21/73 (28%), Positives = 21/73 (28%)
Frame = -1
Query: 945 AXRGGAAXXAGXASGGRXXXPGXPXGXXGRXSXGXARGXXXXXXXXXXXXXXXXGXLXXG 766
A GG G GG G G G G G G G
Sbjct: 117 ACGGGCGGGGGGCGGGCGGGGGGGCGGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGG 176
Query: 765 GGGGGXIXGXGGG 727
G GGG G GGG
Sbjct: 177 GCGGGGGGGCGGG 189
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 29.9 bits (64), Expect = 2.8
Identities = 17/48 (35%), Positives = 17/48 (35%)
Frame = +1
Query: 796 PRXPPXRGXPXXPPGXTSRXXPPXPXGXTGAXLXXPXRXPRXXGRPPP 939
P PP G P P S PP P G G P P R PP
Sbjct: 223 PSEPPSPG-PVDPSDEPSPSDPPGPPGPPGPPTRRPPGPPGPPTRRPP 269
>AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical
protein Y40B1A.5 protein.
Length = 134
Score = 29.9 bits (64), Expect = 2.8
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +2
Query: 716 HAKXPPPXPXMXPPPPPPXYKXP 784
H + PPP PPPPP Y P
Sbjct: 84 HLQYPPPHGLGPPPPPPHYYTQP 106
>Z81135-1|CAB03453.1| 627|Caenorhabditis elegans Hypothetical
protein W01G7.1 protein.
Length = 627
Score = 29.5 bits (63), Expect = 3.7
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +2
Query: 731 PPXPXMXPPPPPPXYK 778
PP P + PPPPPP K
Sbjct: 512 PPLPPLPPPPPPPKPK 527
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical
protein W01B6.7 protein.
Length = 301
Score = 29.5 bits (63), Expect = 3.7
Identities = 12/31 (38%), Positives = 13/31 (41%)
Frame = +1
Query: 793 PPRXPPXRGXPXXPPGXTSRXXPPXPXGXTG 885
P PP + P PPG PP P G G
Sbjct: 141 PVTQPPCQPCPGGPPGPAGPAGPPGPPGPDG 171
>Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical
protein C53B4.5 protein.
Length = 289
Score = 29.5 bits (63), Expect = 3.7
Identities = 17/52 (32%), Positives = 18/52 (34%), Gaps = 4/52 (7%)
Frame = +1
Query: 796 PRXPPXRGXPXXPPGXTSRXXPPXPXGXTG----AXLXXPXRXPRXXGRPPP 939
P PP P P G PP P G G A P P G+P P
Sbjct: 139 PEGPPGPAGPPGPQGNKGPLGPPGPPGPEGPNGTAGNKGPAGPPGPGGKPGP 190
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 29.5 bits (63), Expect = 3.7
Identities = 12/31 (38%), Positives = 13/31 (41%)
Frame = +1
Query: 793 PPRXPPXRGXPXXPPGXTSRXXPPXPXGXTG 885
P PP + P PPG PP P G G
Sbjct: 141 PVTQPPCQPCPGGPPGPAGPAGPPGPPGPDG 171
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 2 (col-2) gene, complete
cds. ).
Length = 301
Score = 29.5 bits (63), Expect = 3.7
Identities = 12/31 (38%), Positives = 13/31 (41%)
Frame = +1
Query: 793 PPRXPPXRGXPXXPPGXTSRXXPPXPXGXTG 885
P PP + P PPG PP P G G
Sbjct: 141 PVTQPPCQPCPGGPPGPAGPAGPPGPPGPDG 171
>AY438643-1|AAR00670.1| 627|Caenorhabditis elegans abnormal DAuer
Formation DAF-5,a Ski oncogene homolog involved in a
neuronal TGF betapathway (71.0 kD) (daf-5) protein.
Length = 627
Score = 29.5 bits (63), Expect = 3.7
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +2
Query: 731 PPXPXMXPPPPPPXYK 778
PP P + PPPPPP K
Sbjct: 512 PPLPPLPPPPPPPKPK 527
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 29.5 bits (63), Expect = 3.7
Identities = 12/31 (38%), Positives = 13/31 (41%)
Frame = +1
Query: 793 PPRXPPXRGXPXXPPGXTSRXXPPXPXGXTG 885
P PP + P PPG PP P G G
Sbjct: 141 PVTQPPCQPCPGGPPGPAGPAGPPGPPGPDG 171
>Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical
protein ZC168.5 protein.
Length = 172
Score = 29.1 bits (62), Expect = 4.9
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +2
Query: 452 PPXPGKGGXLXGXXPPPPPQXSXG 523
PP P GG PPPPP + G
Sbjct: 42 PPPPPCGGGYEAPPPPPPPSYAGG 65
>L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family
protein 1, isoform b protein.
Length = 737
Score = 29.1 bits (62), Expect = 4.9
Identities = 20/72 (27%), Positives = 22/72 (30%), Gaps = 2/72 (2%)
Frame = -1
Query: 936 GGAAXXAGXASGGRXXXPGXPXGXXGRXSXGXARGXXXXXXXXXXXXXXXXGXLXX--GG 763
GG G GG G G + G G G + GG
Sbjct: 52 GGGGGGGGGGGGGGFGGGNGGFGGGGGGNYGGGGGNQGGGGGGGFNFNDIGGLINSMGGG 111
Query: 762 GGGGXIXGXGGG 727
GGGG G GGG
Sbjct: 112 GGGGQRQGGGGG 123
>Z81560-2|CAB04547.1| 1021|Caenorhabditis elegans Hypothetical
protein K02E2.2 protein.
Length = 1021
Score = 28.7 bits (61), Expect = 6.4
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +2
Query: 731 PPXPXMXPPPPPP 769
PP P + PPPPPP
Sbjct: 786 PPPPPVPPPPPPP 798
>Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical
protein F23H12.4 protein.
Length = 301
Score = 28.7 bits (61), Expect = 6.4
Identities = 13/33 (39%), Positives = 15/33 (45%), Gaps = 2/33 (6%)
Frame = +1
Query: 793 PPRXPPXRGXPXX--PPGXTSRXXPPXPXGXTG 885
PP P +G P PPG + PP P G G
Sbjct: 243 PPGPPGPKGAPGPDGPPGVDGQSGPPGPPGPAG 275
>V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-1 coding for a collagen.
).
Length = 296
Score = 28.7 bits (61), Expect = 6.4
Identities = 13/33 (39%), Positives = 15/33 (45%), Gaps = 2/33 (6%)
Frame = +1
Query: 793 PPRXPPXRGXPXX--PPGXTSRXXPPXPXGXTG 885
PP P +G P PPG + PP P G G
Sbjct: 238 PPGPPGPKGAPGPDGPPGADGQSGPPGPPGPAG 270
>U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homology
domain protein 1 protein.
Length = 1346
Score = 28.7 bits (61), Expect = 6.4
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +1
Query: 499 PPPPXIXXXXXIXGGXGPPPPXG 567
PPP I + GG PPPP G
Sbjct: 774 PPPSAIPLPPRLQGGIPPPPPLG 796
>U80023-1|AAG24037.1| 180|Caenorhabditis elegans Hypothetical
protein F07C4.7 protein.
Length = 180
Score = 28.7 bits (61), Expect = 6.4
Identities = 20/65 (30%), Positives = 20/65 (30%), Gaps = 2/65 (3%)
Frame = -1
Query: 915 GXASGGRXXXPGXPXGXXGRXSXGXARGXXXXXXXXXXXXXXXXGXLXXGGGG--GGXIX 742
G GGR G GR G RG G GGG GG
Sbjct: 96 GGNGGGRGGNGGFDDNGGGRGGNGGGRGGTGGFGDNGGGRGGNGGGRGGNGGGNNGGGRG 155
Query: 741 GXGGG 727
G GGG
Sbjct: 156 GNGGG 160
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 28.7 bits (61), Expect = 6.4
Identities = 15/46 (32%), Positives = 15/46 (32%)
Frame = +1
Query: 793 PPRXPPXRGXPXXPPGXTSRXXPPXPXGXTGAXLXXPXRXPRXXGR 930
PP PP G P G PP P G G P GR
Sbjct: 632 PPPPPPPMGLPAVGAGAPPPPPPPPPSGAGGPASVLAKLPPAQDGR 677
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 28.7 bits (61), Expect = 6.4
Identities = 15/46 (32%), Positives = 15/46 (32%)
Frame = +1
Query: 793 PPRXPPXRGXPXXPPGXTSRXXPPXPXGXTGAXLXXPXRXPRXXGR 930
PP PP G P G PP P G G P GR
Sbjct: 458 PPPPPPPMGLPAVGAGAPPPPPPPPPSGAGGPASVLAKLPPAQDGR 503
>U40797-15|AAB37553.2| 1004|Caenorhabditis elegans Temporarily
assigned gene nameprotein 77 protein.
Length = 1004
Score = 28.7 bits (61), Expect = 6.4
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +2
Query: 722 KXPPPXPXMXPPPPPPXYKXP 784
K PPP P PPPP ++ P
Sbjct: 18 KQPPPPPSPRRAPPPPPHRKP 38
>U40187-2|AAA81159.1| 282|Caenorhabditis elegans Collagen protein 8
protein.
Length = 282
Score = 28.7 bits (61), Expect = 6.4
Identities = 17/49 (34%), Positives = 17/49 (34%), Gaps = 1/49 (2%)
Frame = +1
Query: 796 PRXPPXRGXPXXPPGXTSRXXPPXPXGXTGA-XLXXPXRXPRXXGRPPP 939
PR P P P G R PP P G G P GRP P
Sbjct: 145 PRGPSGLVGPAGPAGDQGRHGPPGPTGGQGGPGEQGDAGRPGAAGRPGP 193
>J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 1 (col-1) gene, complete
cds. ).
Length = 296
Score = 28.7 bits (61), Expect = 6.4
Identities = 13/33 (39%), Positives = 15/33 (45%), Gaps = 2/33 (6%)
Frame = +1
Query: 793 PPRXPPXRGXPXX--PPGXTSRXXPPXPXGXTG 885
PP P +G P PPG + PP P G G
Sbjct: 238 PPGPPGPKGAPGPDGPPGADGQSGPPGPPGPAG 270
>AL132898-14|CAC14406.1| 1641|Caenorhabditis elegans Hypothetical
protein Y59A8B.1a protein.
Length = 1641
Score = 28.7 bits (61), Expect = 6.4
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +2
Query: 719 AKXPPPXPXMXPPPPPP 769
A+ PPP PPPPPP
Sbjct: 781 AELPPPPRASEPPPPPP 797
>AL032646-7|CAA21680.1| 485|Caenorhabditis elegans Hypothetical
protein Y54E2A.8 protein.
Length = 485
Score = 28.7 bits (61), Expect = 6.4
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +2
Query: 728 PPPXPXMXPPPPPP 769
P P P + PPPPPP
Sbjct: 159 PTPVPILEPPPPPP 172
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 28.7 bits (61), Expect = 6.4
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +2
Query: 728 PPPXPXMXPPPPPP 769
PPP P + PPPPP
Sbjct: 89 PPPPPTLKAPPPPP 102
>AC006696-4|AAF39985.1| 215|Caenorhabditis elegans Hypothetical
protein W08E12.6 protein.
Length = 215
Score = 28.7 bits (61), Expect = 6.4
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +2
Query: 728 PPPXPXMXPPPPPPXY 775
PPP P PPPPP +
Sbjct: 48 PPPAPIFVAPPPPPCF 63
>AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin
protein.
Length = 1346
Score = 28.7 bits (61), Expect = 6.4
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +1
Query: 499 PPPPXIXXXXXIXGGXGPPPPXG 567
PPP I + GG PPPP G
Sbjct: 774 PPPSAIPLPPRLQGGIPPPPPLG 796
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 28.3 bits (60), Expect = 8.5
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +2
Query: 728 PPPXPXMXPPPPPP 769
PPP P + PPPPP
Sbjct: 580 PPPPPMLGGPPPPP 593
Score = 26.2 bits (55), Expect(2) = 6.8
Identities = 11/27 (40%), Positives = 12/27 (44%)
Frame = +1
Query: 859 PPXPXGXTGAXLXXPXRXPRXXGRPPP 939
PP P +GA P P G PPP
Sbjct: 566 PPLPQNLSGAPPPPPPPPPMLGGPPPP 592
Score = 20.6 bits (41), Expect(2) = 6.8
Identities = 8/27 (29%), Positives = 11/27 (40%)
Frame = +1
Query: 790 APPRXPPXRGXPXXPPGXTSRXXPPXP 870
+PP PP P ++ PP P
Sbjct: 507 SPPTPPPPAPGPHKEQRRSTSKDPPRP 533
>Z95559-1|CAB08999.1| 289|Caenorhabditis elegans Hypothetical
protein Y41E3.2 protein.
Length = 289
Score = 28.3 bits (60), Expect = 8.5
Identities = 11/32 (34%), Positives = 14/32 (43%)
Frame = +1
Query: 790 APPRXPPXRGXPXXPPGXTSRXXPPXPXGXTG 885
+P + P P PPG + PP P G G
Sbjct: 196 SPAKSEPAVPGPPGPPGQAGQQGPPGPPGSNG 227
>U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 3 protein.
Length = 302
Score = 28.3 bits (60), Expect = 8.5
Identities = 16/47 (34%), Positives = 16/47 (34%)
Frame = +1
Query: 796 PRXPPXRGXPXXPPGXTSRXXPPXPXGXTGAXLXXPXRXPRXXGRPP 936
P PP PG R P P G GA L P P PP
Sbjct: 112 PPGPPGPPGRDGRPGAPGRPGNPGPPGRDGALLPGPPPKPPCQKCPP 158
Score = 28.3 bits (60), Expect = 8.5
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = +1
Query: 793 PPRXPPXRGXPXXPPGXTSRXXPPXPXGXTG 885
PP PP + P PPG PP P G G
Sbjct: 147 PPPKPPCQKCPPGPPGPAG---PPGPKGLPG 174
>U29380-1|AAA68740.1| 346|Caenorhabditis elegans Hypothetical
protein ZK546.7 protein.
Length = 346
Score = 28.3 bits (60), Expect = 8.5
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +2
Query: 722 KXPPPXPXMXPPPPPP 769
K PPP P P PPPP
Sbjct: 148 KLPPPPPIPPPGPPPP 163
>AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical
protein Y116A8C.35 protein.
Length = 285
Score = 28.3 bits (60), Expect = 8.5
Identities = 23/73 (31%), Positives = 24/73 (32%), Gaps = 2/73 (2%)
Frame = -1
Query: 939 RGGAAXXAGX--ASGGRXXXPGXPXGXXGRXSXGXARGXXXXXXXXXXXXXXXXGXLXXG 766
RG A AG + G G G G S G G G G
Sbjct: 198 RGRRADAAGHYPSQRGGSGGGGGGGGGGGYGSGGGWGGGGGGRDRDRGGWGGGGGGRGYG 257
Query: 765 GGGGGXIXGXGGG 727
GGGGG G GGG
Sbjct: 258 GGGGGGGYGYGGG 270
>AC084158-11|AAK68558.1| 555|Caenorhabditis elegans Hypothetical
protein Y69A2AR.14 protein.
Length = 555
Score = 28.3 bits (60), Expect = 8.5
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +2
Query: 722 KXPPPXPXMXPPPPPPXYK 778
+ P P P PPPPPP ++
Sbjct: 300 RTPQPHPKPPPPPPPPIHE 318
>AC024838-7|AAF60820.1| 381|Caenorhabditis elegans Hypothetical
protein Y59E9AL.2 protein.
Length = 381
Score = 28.3 bits (60), Expect = 8.5
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +2
Query: 722 KXPPPXPXMXPPPPPP 769
K PPP P P PPPP
Sbjct: 183 KPPPPPPIPPPGPPPP 198
>AC024838-3|AAF60821.1| 381|Caenorhabditis elegans Hypothetical
protein Y59E9AL.3 protein.
Length = 381
Score = 28.3 bits (60), Expect = 8.5
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +2
Query: 722 KXPPPXPXMXPPPPPP 769
K PPP P P PPPP
Sbjct: 183 KPPPPPPIPPPGPPPP 198
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,797,058
Number of Sequences: 27780
Number of extensions: 252516
Number of successful extensions: 4453
Number of sequences better than 10.0: 68
Number of HSP's better than 10.0 without gapping: 1045
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3295
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2454664212
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -