Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_A18
         (878 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z72502-2|CAA96588.1|  423|Caenorhabditis elegans Hypothetical pr...    30   2.5  
Z69636-1|CAA93465.2| 1180|Caenorhabditis elegans Hypothetical pr...    29   4.4  
U41264-10|AAA82430.2|  164|Caenorhabditis elegans Hypothetical p...    28   7.7  

>Z72502-2|CAA96588.1|  423|Caenorhabditis elegans Hypothetical
           protein C08B6.5 protein.
          Length = 423

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 17/54 (31%), Positives = 30/54 (55%)
 Frame = -1

Query: 746 LHIFKIVFALLDKLTYITSWL*LTFLHANTTDYLLPYKNDVGVNFVIVKTKRSD 585
           LH  +++  LLDK TY+T +  LT L  +T       K  + +N ++V+ + +D
Sbjct: 209 LHQNQLIELLLDKETYLTYYFNLT-LEGSTEKNEYNIKRALAMNPIVVRAREAD 261


>Z69636-1|CAA93465.2| 1180|Caenorhabditis elegans Hypothetical
           protein F20B10.1 protein.
          Length = 1180

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = -3

Query: 762 RWSKSPPYF*DCLCFIG*AHLHNKLALID 676
           +W ++PPY   C C I  + LHN++   D
Sbjct: 620 QWGEAPPYSRMCSCAINGSCLHNRMCNCD 648


>U41264-10|AAA82430.2|  164|Caenorhabditis elegans Hypothetical
           protein F10E7.3 protein.
          Length = 164

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = -1

Query: 797 LPAGSFAIQYIIDGRNRLHIFKIVFALLDKLTYITS 690
           +P   F  Q +I   N L+IF ++F L   +  IT+
Sbjct: 86  VPTNRFGTQAVIQSLNTLYIFNVIFILYAGVNNITA 121


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,358,922
Number of Sequences: 27780
Number of extensions: 375525
Number of successful extensions: 762
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 738
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 762
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2213393798
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)