Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP10_F_A17
(920 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 40 0.002
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 40 0.002
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 40 0.002
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 36 0.054
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 34 0.16
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 34 0.16
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 34 0.16
Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical pr... 32 0.50
Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical pr... 32 0.50
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 32 0.50
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 32 0.50
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 32 0.66
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 31 0.88
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 31 1.2
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 31 1.2
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 31 1.2
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 31 1.2
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 31 1.2
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 31 1.5
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 30 2.0
U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astaci... 30 2.0
AF040646-1|AAK31537.1| 530|Caenorhabditis elegans Collagen prot... 30 2.7
U52003-5|AAG00057.1| 730|Caenorhabditis elegans P granule abnor... 29 3.5
U52003-4|ABB51171.1| 771|Caenorhabditis elegans P granule abnor... 29 3.5
AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical... 29 3.5
AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like pro... 29 3.5
AF077868-1|AAC36100.1| 730|Caenorhabditis elegans PGL-1 protein. 29 3.5
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 29 4.7
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 29 4.7
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 29 4.7
Z84574-5|CAB06541.1| 846|Caenorhabditis elegans Hypothetical pr... 28 8.2
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 28 8.2
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 40.3 bits (90), Expect = 0.002
Identities = 21/57 (36%), Positives = 23/57 (40%), Gaps = 2/57 (3%)
Frame = -2
Query: 787 PXXXXXGXKPXXGXXPPXXXXPPXGXPPFXXXPPRGXGPXGXPPPXXPXL--XMAPL 623
P G P PP PP G PP PP G G PPP P + MAP+
Sbjct: 743 PPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAPV 799
Score = 35.1 bits (77), Expect = 0.071
Identities = 18/48 (37%), Positives = 18/48 (37%)
Frame = -2
Query: 787 PXXXXXGXKPXXGXXPPXXXXPPXGXPPFXXXPPRGXGPXGXPPPXXP 644
P G P G PP PP G PP PP P G PP P
Sbjct: 728 PPPPPGGLPPITGGPPPPP--PPGGLPPISGGPPPPPPPPGGCPPPPP 773
Score = 33.5 bits (73), Expect = 0.22
Identities = 18/52 (34%), Positives = 20/52 (38%), Gaps = 1/52 (1%)
Frame = -2
Query: 760 PXXGXXPPXXXXPPXGXPPFXXXPPRGXGP-XGXPPPXXPXLXMAPLXXPRP 608
P G PP PP P PP G P G PPP P + P+ P
Sbjct: 708 PITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPP 759
Score = 32.3 bits (70), Expect = 0.50
Identities = 17/54 (31%), Positives = 18/54 (33%)
Frame = -2
Query: 769 GXKPXXGXXPPXXXXPPXGXPPFXXXPPRGXGPXGXPPPXXPXLXMAPLXXPRP 608
G P PP PP PP P G P PP P + P P P
Sbjct: 711 GGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPP 764
Score = 28.3 bits (60), Expect = 8.2
Identities = 24/89 (26%), Positives = 25/89 (28%)
Frame = -3
Query: 873 GGXXKXPPSQKGXXPKVSXFXPGXEXKXXPXXGXXGXNPXXVKXPRXXPXPXXVXPPFXG 694
GG PP G P P P G P P P P + P G
Sbjct: 701 GGSSALPPITGGPPPPPGL--PPITGGPPPPPPPGGL-PPITGGPPPPPPPGGLPPISGG 757
Query: 693 XPPGGXGLXXXXPPPXPXXVWPXXGXPGP 607
PP PPP P G P P
Sbjct: 758 PPPPPPPPGGCPPPPPPPPPGGFKGGPPP 786
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 40.3 bits (90), Expect = 0.002
Identities = 21/57 (36%), Positives = 23/57 (40%), Gaps = 2/57 (3%)
Frame = -2
Query: 787 PXXXXXGXKPXXGXXPPXXXXPPXGXPPFXXXPPRGXGPXGXPPPXXPXL--XMAPL 623
P G P PP PP G PP PP G G PPP P + MAP+
Sbjct: 743 PPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAPV 799
Score = 35.1 bits (77), Expect = 0.071
Identities = 18/48 (37%), Positives = 18/48 (37%)
Frame = -2
Query: 787 PXXXXXGXKPXXGXXPPXXXXPPXGXPPFXXXPPRGXGPXGXPPPXXP 644
P G P G PP PP G PP PP P G PP P
Sbjct: 728 PPPPPGGLPPITGGPPPPP--PPGGLPPISGGPPPPPPPPGGCPPPPP 773
Score = 33.5 bits (73), Expect = 0.22
Identities = 18/52 (34%), Positives = 20/52 (38%), Gaps = 1/52 (1%)
Frame = -2
Query: 760 PXXGXXPPXXXXPPXGXPPFXXXPPRGXGP-XGXPPPXXPXLXMAPLXXPRP 608
P G PP PP P PP G P G PPP P + P+ P
Sbjct: 708 PITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPP 759
Score = 32.3 bits (70), Expect = 0.50
Identities = 17/54 (31%), Positives = 18/54 (33%)
Frame = -2
Query: 769 GXKPXXGXXPPXXXXPPXGXPPFXXXPPRGXGPXGXPPPXXPXLXMAPLXXPRP 608
G P PP PP PP P G P PP P + P P P
Sbjct: 711 GGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPP 764
Score = 28.3 bits (60), Expect = 8.2
Identities = 24/89 (26%), Positives = 25/89 (28%)
Frame = -3
Query: 873 GGXXKXPPSQKGXXPKVSXFXPGXEXKXXPXXGXXGXNPXXVKXPRXXPXPXXVXPPFXG 694
GG PP G P P P G P P P P + P G
Sbjct: 701 GGSSALPPITGGPPPPPGL--PPITGGPPPPPPPGGL-PPITGGPPPPPPPGGLPPISGG 757
Query: 693 XPPGGXGLXXXXPPPXPXXVWPXXGXPGP 607
PP PPP P G P P
Sbjct: 758 PPPPPPPPGGCPPPPPPPPPGGFKGGPPP 786
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 40.3 bits (90), Expect = 0.002
Identities = 21/57 (36%), Positives = 23/57 (40%), Gaps = 2/57 (3%)
Frame = -2
Query: 787 PXXXXXGXKPXXGXXPPXXXXPPXGXPPFXXXPPRGXGPXGXPPPXXPXL--XMAPL 623
P G P PP PP G PP PP G G PPP P + MAP+
Sbjct: 326 PPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAPV 382
Score = 35.1 bits (77), Expect = 0.071
Identities = 18/48 (37%), Positives = 18/48 (37%)
Frame = -2
Query: 787 PXXXXXGXKPXXGXXPPXXXXPPXGXPPFXXXPPRGXGPXGXPPPXXP 644
P G P G PP PP G PP PP P G PP P
Sbjct: 311 PPPPPGGLPPITGGPPPPP--PPGGLPPISGGPPPPPPPPGGCPPPPP 356
Score = 33.5 bits (73), Expect = 0.22
Identities = 18/52 (34%), Positives = 20/52 (38%), Gaps = 1/52 (1%)
Frame = -2
Query: 760 PXXGXXPPXXXXPPXGXPPFXXXPPRGXGP-XGXPPPXXPXLXMAPLXXPRP 608
P G PP PP P PP G P G PPP P + P+ P
Sbjct: 291 PITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPP 342
Score = 32.3 bits (70), Expect = 0.50
Identities = 17/54 (31%), Positives = 18/54 (33%)
Frame = -2
Query: 769 GXKPXXGXXPPXXXXPPXGXPPFXXXPPRGXGPXGXPPPXXPXLXMAPLXXPRP 608
G P PP PP PP P G P PP P + P P P
Sbjct: 294 GGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPP 347
Score = 28.3 bits (60), Expect = 8.2
Identities = 24/89 (26%), Positives = 25/89 (28%)
Frame = -3
Query: 873 GGXXKXPPSQKGXXPKVSXFXPGXEXKXXPXXGXXGXNPXXVKXPRXXPXPXXVXPPFXG 694
GG PP G P P P G P P P P + P G
Sbjct: 284 GGSSALPPITGGPPPPPGL--PPITGGPPPPPPPGGL-PPITGGPPPPPPPGGLPPISGG 340
Query: 693 XPPGGXGLXXXXPPPXPXXVWPXXGXPGP 607
PP PPP P G P P
Sbjct: 341 PPPPPPPPGGCPPPPPPPPPGGFKGGPPP 369
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 35.5 bits (78), Expect = 0.054
Identities = 18/49 (36%), Positives = 19/49 (38%), Gaps = 1/49 (2%)
Frame = -2
Query: 769 GXKPXXGXXPPXXXXPPXGXP-PFXXXPPRGXGPXGXPPPXXPXLXMAP 626
G P G P PP G P F PP G G G PP P + P
Sbjct: 410 GPPPPGGPGAPGSYGPPQGGPGGFGPPPPGGPGAYGPPPTGFPPVGAPP 458
Score = 31.1 bits (67), Expect = 1.2
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -2
Query: 742 PPXXXXPPXGXPPFXXXPPRGXGPXGXPPP 653
P PP G P PP G P G PPP
Sbjct: 430 PGGFGPPPPGGPGAYGPPPTGFPPVGAPPP 459
Score = 28.7 bits (61), Expect = 6.2
Identities = 23/89 (25%), Positives = 24/89 (26%)
Frame = -3
Query: 876 PGGXXKXPPSQKGXXPKVSXFXPGXEXKXXPXXGXXGXNPXXVKXPRXXPXPXXVXPPFX 697
P G PP Q+ P F G G P P P P
Sbjct: 344 PQGSFGAPPPQQFHAPSPQSFG-GPPPPVSSAPGNFAPPPQSGPPGAFAPPPSAFGAPQG 402
Query: 696 GXPPGGXGLXXXXPPPXPXXVWPXXGXPG 610
PGG G P P P G PG
Sbjct: 403 PGGPGGYGPPPPGGPGAPGSYGPPQGGPG 431
Score = 28.3 bits (60), Expect = 8.2
Identities = 14/44 (31%), Positives = 14/44 (31%)
Frame = -2
Query: 787 PXXXXXGXKPXXGXXPPXXXXPPXGXPPFXXXPPRGXGPXGXPP 656
P G P P PP G PP PP G G P
Sbjct: 426 PQGGPGGFGPPPPGGPGAYGPPPTGFPPVGAPPPGAAGAPGGNP 469
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 33.9 bits (74), Expect = 0.16
Identities = 18/52 (34%), Positives = 19/52 (36%)
Frame = -2
Query: 763 KPXXGXXPPXXXXPPXGXPPFXXXPPRGXGPXGXPPPXXPXLXMAPLXXPRP 608
+P P PP G PP PPRG P G PP P RP
Sbjct: 403 EPRGPRRSPPTGSPPTGSPP-TGRPPRGSPPTGSPPTGLPSRQKRQAPEDRP 453
Score = 31.1 bits (67), Expect = 1.2
Identities = 24/82 (29%), Positives = 24/82 (29%), Gaps = 7/82 (8%)
Frame = -2
Query: 877 PRGXXKTPPFPKGX---IXQSFXXXPXXXKXXXPXXXXXGXKPXXGXXPPXXXX----PP 719
P G PP PKG P P P G PP PP
Sbjct: 233 PAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP 292
Query: 718 XGXPPFXXXPPRGXGPXGXPPP 653
P PPRG P G PP
Sbjct: 293 RAGSPPPPPPPRGSPPTGSLPP 314
Score = 29.5 bits (63), Expect = 3.5
Identities = 20/88 (22%), Positives = 23/88 (26%)
Frame = -3
Query: 876 PGGXXKXPPSQKGXXPKVSXFXPGXEXKXXPXXGXXGXNPXXVKXPRXXPXPXXVXPPFX 697
P PP + G P P +P PR P + PP
Sbjct: 258 PPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQA 317
Query: 696 GXPPGGXGLXXXXPPPXPXXVWPXXGXP 613
G P G PPP P P
Sbjct: 318 GGSPPPAGTGSPPPPPRQKRQAPERSPP 345
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 33.9 bits (74), Expect = 0.16
Identities = 18/52 (34%), Positives = 19/52 (36%)
Frame = -2
Query: 763 KPXXGXXPPXXXXPPXGXPPFXXXPPRGXGPXGXPPPXXPXLXMAPLXXPRP 608
+P P PP G PP PPRG P G PP P RP
Sbjct: 424 EPRGPRRSPPTGSPPTGSPP-TGRPPRGSPPTGSPPTGLPSRQKRQAPEDRP 474
Score = 31.1 bits (67), Expect = 1.2
Identities = 24/82 (29%), Positives = 24/82 (29%), Gaps = 7/82 (8%)
Frame = -2
Query: 877 PRGXXKTPPFPKGX---IXQSFXXXPXXXKXXXPXXXXXGXKPXXGXXPPXXXX----PP 719
P G PP PKG P P P G PP PP
Sbjct: 254 PAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP 313
Query: 718 XGXPPFXXXPPRGXGPXGXPPP 653
P PPRG P G PP
Sbjct: 314 RAGSPPPPPPPRGSPPTGSLPP 335
Score = 29.5 bits (63), Expect = 3.5
Identities = 20/88 (22%), Positives = 23/88 (26%)
Frame = -3
Query: 876 PGGXXKXPPSQKGXXPKVSXFXPGXEXKXXPXXGXXGXNPXXVKXPRXXPXPXXVXPPFX 697
P PP + G P P +P PR P + PP
Sbjct: 279 PPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQA 338
Query: 696 GXPPGGXGLXXXXPPPXPXXVWPXXGXP 613
G P G PPP P P
Sbjct: 339 GGSPPPAGTGSPPPPPRQKRQAPERSPP 366
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 33.9 bits (74), Expect = 0.16
Identities = 18/52 (34%), Positives = 19/52 (36%)
Frame = -2
Query: 763 KPXXGXXPPXXXXPPXGXPPFXXXPPRGXGPXGXPPPXXPXLXMAPLXXPRP 608
+P P PP G PP PPRG P G PP P RP
Sbjct: 409 EPRGPRRSPPTGSPPTGSPP-TGRPPRGSPPTGSPPTGLPSRQKRQAPEDRP 459
Score = 31.1 bits (67), Expect = 1.2
Identities = 24/82 (29%), Positives = 24/82 (29%), Gaps = 7/82 (8%)
Frame = -2
Query: 877 PRGXXKTPPFPKGX---IXQSFXXXPXXXKXXXPXXXXXGXKPXXGXXPPXXXX----PP 719
P G PP PKG P P P G PP PP
Sbjct: 239 PAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP 298
Query: 718 XGXPPFXXXPPRGXGPXGXPPP 653
P PPRG P G PP
Sbjct: 299 RAGSPPPPPPPRGSPPTGSLPP 320
Score = 29.5 bits (63), Expect = 3.5
Identities = 20/88 (22%), Positives = 23/88 (26%)
Frame = -3
Query: 876 PGGXXKXPPSQKGXXPKVSXFXPGXEXKXXPXXGXXGXNPXXVKXPRXXPXPXXVXPPFX 697
P PP + G P P +P PR P + PP
Sbjct: 264 PPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQA 323
Query: 696 GXPPGGXGLXXXXPPPXPXXVWPXXGXP 613
G P G PPP P P
Sbjct: 324 GGSPPPAGTGSPPPPPRQKRQAPERSPP 351
>Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical
protein B0035.1b protein.
Length = 341
Score = 32.3 bits (70), Expect = 0.50
Identities = 24/78 (30%), Positives = 25/78 (32%), Gaps = 7/78 (8%)
Frame = -2
Query: 856 PPFPKGXIXQS--FXXXPXXXKXXXPXXXXXGXKPXXGXXP---PXXXXPPXGXPPFXXX 692
PP P G S + P P P G P P PP G P
Sbjct: 127 PPMPSGPPPPSMAYGMPPMPSGMMPPRGMPGAYPPPRGYPPAPAPGVYMPPPGMPGAYPP 186
Query: 691 P--PRGXGPXGXPPPXXP 644
P P G GP G PP P
Sbjct: 187 PRMPIGHGPPGGPPMPGP 204
>Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical
protein B0035.1a protein.
Length = 298
Score = 32.3 bits (70), Expect = 0.50
Identities = 24/78 (30%), Positives = 25/78 (32%), Gaps = 7/78 (8%)
Frame = -2
Query: 856 PPFPKGXIXQS--FXXXPXXXKXXXPXXXXXGXKPXXGXXP---PXXXXPPXGXPPFXXX 692
PP P G S + P P P G P P PP G P
Sbjct: 127 PPMPSGPPPPSMAYGMPPMPSGMMPPRGMPGAYPPPRGYPPAPAPGVYMPPPGMPGAYPP 186
Query: 691 P--PRGXGPXGXPPPXXP 644
P P G GP G PP P
Sbjct: 187 PRMPIGHGPPGGPPMPGP 204
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 32.3 bits (70), Expect = 0.50
Identities = 23/81 (28%), Positives = 25/81 (30%), Gaps = 2/81 (2%)
Frame = -3
Query: 843 KGXXPKVSXFXPGXEXKXXPXXGXXGXNPXXVKXPRXXPXPXXVXPPFXGXPPGGXGLXX 664
+G P V P P G P P P PP G PG G+
Sbjct: 257 QGQYPPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPP-PGRTPGPPGMPG 315
Query: 663 XXPPPXPXXVWP--XXGXPGP 607
PPP P P G P P
Sbjct: 316 MPPPPPPSRFGPPGMGGMPPP 336
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 32.3 bits (70), Expect = 0.50
Identities = 23/81 (28%), Positives = 25/81 (30%), Gaps = 2/81 (2%)
Frame = -3
Query: 843 KGXXPKVSXFXPGXEXKXXPXXGXXGXNPXXVKXPRXXPXPXXVXPPFXGXPPGGXGLXX 664
+G P V P P G P P P PP G PG G+
Sbjct: 267 QGQYPPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPP-PGRTPGPPGMPG 325
Query: 663 XXPPPXPXXVWP--XXGXPGP 607
PPP P P G P P
Sbjct: 326 MPPPPPPSRFGPPGMGGMPPP 346
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 31.9 bits (69), Expect = 0.66
Identities = 22/73 (30%), Positives = 23/73 (31%), Gaps = 2/73 (2%)
Frame = -2
Query: 856 PPFPKGXIXQSFXXXPXXXKXXXPXXXXXGXKPXXGXXPPXXXXPPXGXPPFXXXPP--R 683
PP P G + S P P P PP PP PP PP R
Sbjct: 209 PPSP-GPVDPSEDPKPSEPPSPGPVDPSDEPSPSDPPGPPGPPGPPTRRPPGPPGPPTRR 267
Query: 682 GXGPXGXPPPXXP 644
GP G P P
Sbjct: 268 PPGPPGPPTRRPP 280
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 31.5 bits (68), Expect = 0.88
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = -2
Query: 760 PXXGXXPPXXXXPPXGXPPFXXXPPRGXGPXGXPPP 653
P PP P G PP PP G P PPP
Sbjct: 710 PGIPGYPPAPPPPGVGPPPPQGIPPMGFDPNKPPPP 745
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 31.1 bits (67), Expect = 1.2
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = +3
Query: 645 GXXGGGXPXGPXPRGGXXKKGGXPXGGXXXXGG 743
G GGG GP RGG GG GG GG
Sbjct: 222 GGGGGGGWGGPAQRGGPGAYGGPGGGGQGGYGG 254
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 31.1 bits (67), Expect = 1.2
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = +3
Query: 645 GXXGGGXPXGPXPRGGXXKKGGXPXGGXXXXGG 743
G GGG GP RGG GG GG GG
Sbjct: 184 GGGGGGGWGGPAQRGGPGAYGGPGGGGQGGYGG 216
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 31.1 bits (67), Expect = 1.2
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = +3
Query: 645 GXXGGGXPXGPXPRGGXXKKGGXPXGGXXXXGG 743
G GGG GP RGG GG GG GG
Sbjct: 184 GGGGGGGWGGPAQRGGPGAYGGPGGGGQGGYGG 216
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 31.1 bits (67), Expect = 1.2
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = +3
Query: 645 GXXGGGXPXGPXPRGGXXKKGGXPXGGXXXXGG 743
G GGG GP RGG GG GG GG
Sbjct: 222 GGGGGGGWGGPAQRGGPGAYGGPGGGGQGGYGG 254
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 31.1 bits (67), Expect = 1.2
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = +3
Query: 645 GXXGGGXPXGPXPRGGXXKKGGXPXGGXXXXGG 743
G GGG GP RGG GG GG GG
Sbjct: 222 GGGGGGGWGGPAQRGGPGAYGGPGGGGQGGYGG 254
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 30.7 bits (66), Expect = 1.5
Identities = 18/54 (33%), Positives = 19/54 (35%), Gaps = 2/54 (3%)
Frame = -2
Query: 769 GXKPXXGXXPPXXXXPPXGXPPFXXXPPR--GXGPXGXPPPXXPXLXMAPLXXP 614
G P PP PP PP PP+ P PPP P M P P
Sbjct: 26 GPPPCPPPPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPPPPP 79
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 30.3 bits (65), Expect = 2.0
Identities = 17/45 (37%), Positives = 17/45 (37%)
Frame = +3
Query: 609 GRGXXXGAIXXXGXXGGGXPXGPXPRGGXXKKGGXPXGGXXXXGG 743
G G G G GGG G RGG GG GG GG
Sbjct: 86 GGGNGGGGRGGGGGGGGGRGGGGGGRGGGGGGGGGRGGGGGGRGG 130
>U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astacin
protease protein33 protein.
Length = 644
Score = 30.3 bits (65), Expect = 2.0
Identities = 15/40 (37%), Positives = 16/40 (40%), Gaps = 1/40 (2%)
Frame = -2
Query: 760 PXXGXXPPXXXXPPXGX-PPFXXXPPRGXGPXGXPPPXXP 644
P G PP PP PP+ PP G P PP P
Sbjct: 51 PPFGPPPPWDRPPPPWRRPPWHRRPPWGLPPPPPPPEPEP 90
>AF040646-1|AAK31537.1| 530|Caenorhabditis elegans Collagen protein
70 protein.
Length = 530
Score = 29.9 bits (64), Expect = 2.7
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = +3
Query: 609 GRGXXXGAIXXXGXXGGGXPXGPXPRGGXXKKGGXPXG 722
G G G G G G P GP GG GG P G
Sbjct: 117 GPGTPGGPGNPGGLGGPGNPGGPGTPGGPGTPGGQPHG 154
>U52003-5|AAG00057.1| 730|Caenorhabditis elegans P granule
abnormality protein 1,isoform a protein.
Length = 730
Score = 29.5 bits (63), Expect = 3.5
Identities = 18/46 (39%), Positives = 19/46 (41%)
Frame = +3
Query: 609 GRGXXXGAIXXXGXXGGGXPXGPXPRGGXXKKGGXPXGGXXXXGGF 746
GRG G G GGG G GG +GG GG GGF
Sbjct: 687 GRGGYGGDRGGRGGYGGGDRGGRGGYGGDRGRGG--YGGRGGRGGF 730
>U52003-4|ABB51171.1| 771|Caenorhabditis elegans P granule
abnormality protein 1,isoform b protein.
Length = 771
Score = 29.5 bits (63), Expect = 3.5
Identities = 18/46 (39%), Positives = 19/46 (41%)
Frame = +3
Query: 609 GRGXXXGAIXXXGXXGGGXPXGPXPRGGXXKKGGXPXGGXXXXGGF 746
GRG G G GGG G GG +GG GG GGF
Sbjct: 728 GRGGYGGDRGGRGGYGGGDRGGRGGYGGDRGRGG--YGGRGGRGGF 771
>AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical
protein Y113G7B.23 protein.
Length = 789
Score = 29.5 bits (63), Expect = 3.5
Identities = 16/46 (34%), Positives = 17/46 (36%), Gaps = 1/46 (2%)
Frame = -2
Query: 787 PXXXXXGXKPXXGXXPPXXXX-PPXGXPPFXXXPPRGXGPXGXPPP 653
P G + G PP PP G PP PP P PPP
Sbjct: 680 PPPPPQGQQYYGGPPPPGQPYGPPGGYPPQQQRPPYQAQPYPGPPP 725
>AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like
protein protein.
Length = 789
Score = 29.5 bits (63), Expect = 3.5
Identities = 16/46 (34%), Positives = 17/46 (36%), Gaps = 1/46 (2%)
Frame = -2
Query: 787 PXXXXXGXKPXXGXXPPXXXX-PPXGXPPFXXXPPRGXGPXGXPPP 653
P G + G PP PP G PP PP P PPP
Sbjct: 680 PPPPPQGQQYYGGPPPPGQPYGPPGGYPPQQQRPPYQAQPYPGPPP 725
>AF077868-1|AAC36100.1| 730|Caenorhabditis elegans PGL-1 protein.
Length = 730
Score = 29.5 bits (63), Expect = 3.5
Identities = 18/46 (39%), Positives = 19/46 (41%)
Frame = +3
Query: 609 GRGXXXGAIXXXGXXGGGXPXGPXPRGGXXKKGGXPXGGXXXXGGF 746
GRG G G GGG G GG +GG GG GGF
Sbjct: 687 GRGGYGGDRGGRGGYGGGDRGGRGGYGGDRGRGG--YGGRGGRGGF 730
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 29.1 bits (62), Expect = 4.7
Identities = 18/56 (32%), Positives = 18/56 (32%), Gaps = 2/56 (3%)
Frame = -2
Query: 769 GXKPXXGXXPPXXXXPPXGX--PPFXXXPPRGXGPXGXPPPXXPXLXMAPLXXPRP 608
G P PP P PPF PP G PPP M P P P
Sbjct: 269 GPPPHHPYGPPHPMHHPYAMMPPPFGFFPPPPRGHFPPPPPHFMGRGMPPPFMPPP 324
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 29.1 bits (62), Expect = 4.7
Identities = 18/56 (32%), Positives = 18/56 (32%), Gaps = 2/56 (3%)
Frame = -2
Query: 769 GXKPXXGXXPPXXXXPPXGX--PPFXXXPPRGXGPXGXPPPXXPXLXMAPLXXPRP 608
G P PP P PPF PP G PPP M P P P
Sbjct: 269 GPPPHHPYGPPHPMHHPYAMMPPPFGFFPPPPRGHFPPPPPHFMGRGMPPPFMPPP 324
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 29.1 bits (62), Expect = 4.7
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = -2
Query: 769 GXKPXXGXXPPXXXXPPXGXPPFXXXPP 686
G P G PP PP G PP PP
Sbjct: 1584 GPPPLMGGPPPRLGMPPPGPPPPNGGPP 1611
>Z84574-5|CAB06541.1| 846|Caenorhabditis elegans Hypothetical
protein F33E2.6 protein.
Length = 846
Score = 28.3 bits (60), Expect = 8.2
Identities = 17/45 (37%), Positives = 17/45 (37%)
Frame = -2
Query: 739 PXXXXPPXGXPPFXXXPPRGXGPXGXPPPXXPXLXMAPLXXPRPK 605
P PP PP PPR P PPP P P P PK
Sbjct: 377 PPKTEPPTTEPP-KIEPPRTEPPKTEPPPTEPPKTEPPKTTP-PK 419
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 28.3 bits (60), Expect = 8.2
Identities = 17/46 (36%), Positives = 18/46 (39%)
Frame = +3
Query: 606 LGRGXXXGAIXXXGXXGGGXPXGPXPRGGXXKKGGXPXGGXXXXGG 743
+G G G G GGG G P GG GG GG GG
Sbjct: 200 MGGGGYGGGGMGGGGYGGGGDGGYGPSGGYG--GGYGPGGGYGMGG 243
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,138,557
Number of Sequences: 27780
Number of extensions: 184057
Number of successful extensions: 1359
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 426
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1039
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2360254050
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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